FFCP PHASE1:Hg19::chr2:72375473..72375477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR63 | |UniProt=Q9NR63 | ||
|association_with_transcript=-306bp_to_ENST00000001146_5end | |association_with_transcript=-306bp_to_ENST00000001146_5end | ||
|cluster_id=chr2:72375473..72375477,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_CYP26B1_5end | |description=CAGE_peak_3_at_CYP26B1_5end | ||
|id=chr2:72375473..72375477,- | |id=chr2:72375473..72375477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;5.19e-13;5!CL:0000349;2.79e-12;19!CL:0000746;5.48e-10;3!CL:0002541;5.72e-10;3!CL:0000737;1.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,5.21e-13,5;CL:0000349,3.06e-12,19;CL:0000746,5.02e-10,3;CL:0000513,5.02e-10,3;CL:0002541,5.74e-10,3;CL:0000737,1.01e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;5.48e-10;3!UBERON:0010115;1.07e-07;1!UBERON:0005425;1.07e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.22e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.59e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-19!115;UBERON:0004923!1.00e-12!57;UBERON:0000924!1.48e-11!173;UBERON:0006601!1.48e-11!173;UBERON:0004121!8.48e-11!169;UBERON:0005631!9.00e-11!14;UBERON:0000158!9.00e-11!14;UBERON:0000064!1.33e-09!219;UBERON:0002346!1.98e-09!90;UBERON:0000153!1.17e-08!129;UBERON:0007811!1.17e-08!129;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002616!4.56e-08!59;UBERON:0000073!4.60e-08!94;UBERON:0001016!4.60e-08!94;UBERON:0000033!8.03e-08!123;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57;UBERON:0000955!1.53e-07!69;UBERON:0006238!1.53e-07!69;UBERON:0001017!4.42e-07!82;UBERON:0005743!5.14e-07!86;UBERON:0000478!6.38e-07!24;UBERON:0003124!6.84e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.08e-17;10!UBERON:0000158;6.08e-17;10!UBERON:0003714;1.04e-13;2!UBERON:0003124;5.72e-10;3!UBERON:0000920;5.72e-10;3!UBERON:0000478;1.33e-09;24!UBERON:0000305;1.99e-09;7!UBERON:0002363;1.07e-07;1!UBERON:0002134;1.07e-07;1!UBERON:0000941;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0005208;1.07e-07;1!UBERON:0004145;1.07e-07;1!UBERON:0005946;1.07e-07;1!UBERON:0005965;1.07e-07;1!UBERON:0002078;1.07e-07;1!UBERON:0002346;2.75e-07;4!UBERON:0000923;2.75e-07;4!UBERON:0010316;2.75e-07;4!UBERON:0005291;2.75e-07;4!UBERON:0000010;6.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.30e-17,14;UBERON:0000158,8.30e-17,14;UBERON:0003714,1.27e-13,2;UBERON:0004923,4.50e-10,66;UBERON:0000920,5.74e-10,3;UBERON:0000478,1.43e-09,24;UBERON:0000305,2.00e-09,7;UBERON:0003124,5.13e-09,7;UBERON:0004871,2.66e-08,8;UBERON:0002134,8.51e-08,1;UBERON:0005208,8.51e-08,1;UBERON:0005946,8.51e-08,1;UBERON:0005965,8.51e-08,1;UBERON:0002078,8.51e-08,1;UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1;UBERON:0002363,1.26e-07,1;UBERON:0007645,1.26e-07,1;UBERON:0007647,1.26e-07,1;UBERON:0010115,1.26e-07,1;UBERON:0000010,8.21e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0,0.872338524100369,0,1.26343974685366,0,0,2.09340350391728,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0.639312809217652,0.722878304769133,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0,0,0,1.81628913173918,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,8.28324130783232,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.907170879989041,0,0,0,0,0.511707249066704,0,0,0.308419387605311,0,0.492762936082855,0,1.27831416305955,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0.284136146806413,9.78852387424529,7.12715233998333,53.7531228673656,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.995213339381022,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,2.55200927785536,0.366390373607449,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,0,0,0,0,0,0,0.61214552326098,1.26373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0,0,0,0.268733889946905,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0.303747783290123,0,0.86686278029118,0.419636705079985,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0.146552233678082,0,0,0.39669780522807,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,1.96600200892211,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,1.10086159299127,0,0,1.2754495206101,1.85903646388503,1.11728983594649,0,0.0788617450012534,0,0.352675943690684,2.4499638188256,0.128458450192919,0,0,0.205116364240755,0,0.622415272177961,0.161475645631851,1.42769420259154,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0.540300676947157,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.177404740325278,0,0,1.90315252335129,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.339957450954573,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.378893491091197,1.07185652062471,0.829169439458779,0,0.639701945702943,0,0.710478008196067,0.248298857183432,0,0.763765899337979,0,0.435433495793923,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,1.00636896795513,0 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| ||
|short_description=p3@CYP26B1 | |short_description=p3@CYP26B1 | ||
}} | }} |
Latest revision as of 08:26, 18 September 2015
Short description: | p3@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP26B1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -306bp_to_ENST00000001146_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 5.21e-13 | 5 |
extraembryonic cell | 3.06e-12 | 19 |
cardiac muscle cell | 5.02e-10 | 3 |
cardiac muscle myoblast | 5.02e-10 | 3 |
chorionic membrane mesenchymal stem cell | 5.74e-10 | 3 |
striated muscle cell | 1.01e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.30e-17 | 14 |
membranous layer | 8.30e-17 | 14 |
neural tissue | 1.27e-13 | 2 |
organ component layer | 4.50e-10 | 66 |
egg chorion | 5.74e-10 | 3 |
extraembryonic structure | 1.43e-09 | 24 |
amnion | 2.00e-09 | 7 |
chorion | 5.13e-09 | 7 |
somatic layer of lateral plate mesoderm | 2.66e-08 | 8 |
tricuspid valve | 8.51e-08 | 1 |
right atrium valve | 8.51e-08 | 1 |
outflow tract of atrium | 8.51e-08 | 1 |
outflow part of right atrium | 8.51e-08 | 1 |
right cardiac atrium | 8.51e-08 | 1 |
cranial nerve II | 9.10e-08 | 1 |
cranial nerve | 9.10e-08 | 1 |
nerve trunk | 9.10e-08 | 1 |
nerve connecting eye with brain | 9.10e-08 | 1 |
nerve | 9.10e-08 | 1 |
retinal neural layer | 9.10e-08 | 1 |
presumptive neural retina | 9.10e-08 | 1 |
dura mater | 1.26e-07 | 1 |
future meninx | 1.26e-07 | 1 |
ectomeninx | 1.26e-07 | 1 |
future dura mater | 1.26e-07 | 1 |
peripheral nervous system | 8.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.59e-10 | 10 |