FFCP PHASE1:Hg19::chr2:71829854..71829862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |EntrezGene=8291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |HGNC=3097 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000487180_5end | |association_with_transcript=40bp_to_ENST00000487180_5end | ||
|cluster_id=chr2:71829854..71829862,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_14_at_DYSF_5end | |description=CAGE_peak_14_at_DYSF_5end | ||
|id=chr2:71829854..71829862,+ | |id=chr2:71829854..71829862,+ | ||
|ontology_enrichment_celltype=CL:0000990!5.93e-16!8;CL:0000840!6.01e-16!5;CL:0001029!6.01e-16!5;CL:0000451!5.19e-13!10 | |ontology_enrichment_celltype=CL:0000990!5.93e-16!8;CL:0000840!6.01e-16!5;CL:0001029!6.01e-16!5;CL:0000451!5.19e-13!10 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.83e-33;5!CL:0000990;1.35e-22;8!CL:0000451;1.24e-18;10!CL:0000346;1.40e-08;3!CL:1000428;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.64e-33,5;CL:0001029,1.64e-33,5;CL:0000990,1.26e-22,8;CL:0000451,1.17e-18,10;CL:0000346,1.51e-08,3;CL:1000428,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.82e-07!1;DOID:0060061!2.82e-07!1;DOID:8691!2.82e-07!1;DOID:2355!4.25e-07!1 | |ontology_enrichment_disease=DOID:0060060!2.82e-07!1;DOID:0060061!2.82e-07!1;DOID:8691!2.82e-07!1;DOID:2355!4.25e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.28e-23;1!DOID:0060061;3.28e-23;1!DOID:8691;3.28e-23;1!DOID:0060058;7.57e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.28e-23,1;DOID:0060061,3.28e-23,1;DOID:8691,3.28e-23,1;DOID:0060058,7.74e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.70e-08!7;UBERON:0002134!4.01e-07!1;UBERON:0005208!4.01e-07!1;UBERON:0005946!4.01e-07!1;UBERON:0005965!4.01e-07!1;UBERON:0002078!4.01e-07!1;UBERON:0002370!6.03e-07!4;UBERON:0005058!6.03e-07!4;UBERON:0009113!6.03e-07!4;UBERON:0003295!6.03e-07!4;UBERON:0005562!6.03e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!5.70e-08!7;UBERON:0002134!4.01e-07!1;UBERON:0005208!4.01e-07!1;UBERON:0005946!4.01e-07!1;UBERON:0005965!4.01e-07!1;UBERON:0002078!4.01e-07!1;UBERON:0002370!6.03e-07!4;UBERON:0005058!6.03e-07!4;UBERON:0009113!6.03e-07!4;UBERON:0003295!6.03e-07!4;UBERON:0005562!6.03e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.85e-45;2!UBERON:0005058;2.85e-45;2!UBERON:0009113;2.85e-45;2!UBERON:0004177;8.28e-19;5!UBERON:0005057;8.28e-19;5!UBERON:0000412;1.40e-08;3!UBERON:0001992;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.94e-23,4;UBERON:0005058,2.94e-23,4;UBERON:0009113,2.94e-23,4;UBERON:0003295,2.94e-23,4;UBERON:0005562,2.94e-23,4;UBERON:0003351,7.23e-16,6;UBERON:0004177,9.53e-14,7;UBERON:0005057,9.53e-14,7;UBERON:0000974,6.48e-10,10;UBERON:0003408,6.48e-10,10;UBERON:0001042,6.48e-10,10;UBERON:0009145,6.48e-10,10;UBERON:0006562,4.25e-09,11;UBERON:0009722,4.25e-09,11;UBERON:0007690,4.25e-09,11;UBERON:0000412,1.51e-08,3;UBERON:0001992,1.51e-08,3 | |||
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|short_description=p14@DYSF | |short_description=p14@DYSF | ||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p14@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DYSF_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 40bp_to_ENST00000487180_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.64e-33 | 5 |
common dendritic progenitor | 1.64e-33 | 5 |
conventional dendritic cell | 1.26e-22 | 8 |
dendritic cell | 1.17e-18 | 10 |
hair follicle dermal papilla cell | 1.51e-08 | 3 |
stem cell of epidermis | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.94e-23 | 4 |
hemolymphoid system gland | 2.94e-23 | 4 |
thymic region | 2.94e-23 | 4 |
pharyngeal gland | 2.94e-23 | 4 |
thymus primordium | 2.94e-23 | 4 |
pharyngeal epithelium | 7.23e-16 | 6 |
hemopoietic organ | 9.53e-14 | 7 |
immune organ | 9.53e-14 | 7 |
neck | 6.48e-10 | 10 |
gland of gut | 6.48e-10 | 10 |
chordate pharynx | 6.48e-10 | 10 |
pharyngeal region of foregut | 6.48e-10 | 10 |
pharynx | 4.25e-09 | 11 |
entire pharyngeal arch endoderm | 4.25e-09 | 11 |
early pharyngeal endoderm | 4.25e-09 | 11 |
dermal papilla | 1.51e-08 | 3 |
papillary layer of dermis | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.28e-23 | 1 |
cutaneous T cell lymphoma | 3.28e-23 | 1 |
mycosis fungoides | 3.28e-23 | 1 |
lymphoma | 7.74e-10 | 10 |