FFCP PHASE1:Hg19::chr9:93563876..93563886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6850 | |EntrezGene=6850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11491 | |HGNC=11491 | ||
|TSSclassifier=strong | |||
|UniProt=P43405,A8K4G2 | |UniProt=P43405,A8K4G2 | ||
|association_with_transcript=-125bp_to_NM_001135052,NM_003177,uc004aqy.2,uc004aqz.2,uc004ara.2_5end | |association_with_transcript=-125bp_to_NM_001135052,NM_003177,uc004aqy.2,uc004aqz.2,uc004ara.2_5end | ||
|cluster_id=chr9:93563876..93563886,+ | |||
|description=CAGE_peak_6_at_SYK_5end | |description=CAGE_peak_6_at_SYK_5end | ||
|id=chr9:93563876..93563886,+ | |id=chr9:93563876..93563886,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.34e-16!24;CL:0000826!1.34e-16!24;CL:0000542!1.23e-11!53;CL:0000051!1.23e-11!53;CL:0000838!9.53e-11!52;CL:0000236!3.02e-07!14 | |ontology_enrichment_celltype=CL:0000945!1.34e-16!24;CL:0000826!1.34e-16!24;CL:0000542!1.23e-11!53;CL:0000051!1.23e-11!53;CL:0000838!9.53e-11!52;CL:0000236!3.02e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.38e-25;24!CL:0000236;6.38e-24;13!CL:0000946;1.10e-13;1!CL:0000817;1.10e-13;1!CL:0000786;1.10e-13;1!CL:0000542;1.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.37e-31,14;CL:0000945,1.15e-24,24;CL:0000826,1.15e-24,24;CL:0000817,3.20e-17,3;CL:0000946,2.07e-13,1;CL:0000786,2.07e-13,1;CL:0000980,2.07e-13,1;CL:0000838,4.20e-11,52;CL:0000542,6.97e-11,53;CL:0000051,6.97e-11,53;CL:0000785,2.40e-07,2;CL:0000955,2.40e-07,2;CL:0000818,2.40e-07,2;CL:0000954,2.40e-07,2;CL:0000816,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.04e-11;5!CL:0000051;1.01e-07;53!CL:0000954;1.75e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.08e-10!51;DOID:0060083!1.08e-10!51;DOID:0060058!7.38e-09!10;DOID:0050686!2.92e-07!137;DOID:1240!5.24e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.83e-14;1!DOID:1357;4.83e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.53e-14,1;DOID:1357,4.53e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.21e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.44e-25;2!UBERON:0005058;1.44e-25;2!UBERON:0009113;1.44e-25;2!UBERON:0001764;4.83e-14;1!UBERON:0001825;4.83e-14;1!UBERON:0002046;3.04e-11;5!UBERON:0004177;7.88e-11;5!UBERON:0005057;7.88e-11;5!UBERON:0000341;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,1.45e-18,11;UBERON:0007690,1.45e-18,11;UBERON:0001764,4.53e-14,1;UBERON:0001825,4.53e-14,1;UBERON:0002370,2.67e-13,4;UBERON:0005058,2.67e-13,4;UBERON:0009113,2.67e-13,4;UBERON:0003295,2.67e-13,4;UBERON:0005562,2.67e-13,4;UBERON:0000974,9.07e-12,10;UBERON:0008814,1.86e-11,18;UBERON:0002046,3.04e-11,5;UBERON:0004117,3.04e-11,5;UBERON:0007689,3.04e-11,5;UBERON:0007123,3.04e-11,5;UBERON:0003091,3.04e-11,5;UBERON:0003351,3.56e-09,6;UBERON:0004177,5.47e-08,7;UBERON:0005057,5.47e-08,7;UBERON:0000341,1.36e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.472264687882075,0,0,0.154816123316076,0,0.30120591877825,0,0.46480320348181,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,2.13365111283254,0,0,0.661044872784862,0,0,1.17447437874188,3.05818582500183,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.743212700502875,1.298422916788,0,0.637705090915289,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0.338583555603207,0.321176150207399,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.552567831062295,0.251932747854276,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.729819156862664,0.391329237864179,0,0.394584402849391,0,0,0,0,0.414752765588989,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.472834243795189,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,1.38328142328561,1.70509637733254,0,0,0,0,0,2.98402782875445,0,0,0,0,0,0.124192805882767,0.691743174681154,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.511049710558381,0,0,0,0.227662191351298,0,1.03710588800201,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0.935757853848423,0.795803100645473,0,0.90356865631168,0,0.905777061400041,0,0,0,0,0.235676547101626,0,0,0,0,0.281951753939561,0.515663103788617,0.199882311849858,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.454672189309436,0,0,0,0.213233981900981,1.66645102024618,1.29177819672012,1.30356900021302,0,5.53730277020035,4.64869534603904,0,0,0.336760265072938,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0.603821380773079,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.472264687882075,0,0,0.154816123316076,0,0.30120591877825,0,0.46480320348181,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,2.13365111283254,0,0,0.661044872784862,0,0,1.17447437874188,3.05818582500183,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.743212700502875,1.298422916788,0,0.637705090915289,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0.338583555603207,0.321176150207399,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.552567831062295,0.251932747854276,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.729819156862664,0.391329237864179,0,0.394584402849391,0,0,0,0,0.414752765588989,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.472834243795189,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,1.38328142328561,1.70509637733254,0,0,0,0,0,2.98402782875445,0,0,0,0,0,0.124192805882767,0.691743174681154,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.511049710558381,0,0,0,0.227662191351298,0,1.03710588800201,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0.935757853848423,0.795803100645473,0,0.90356865631168,0,0.905777061400041,0,0,0,0,0.235676547101626,0,0,0,0,0.281951753939561,0.515663103788617,0.199882311849858,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.454672189309436,0,0,0,0.213233981900981,1.66645102024618,1.29177819672012,1.30356900021302,0,5.53730277020035,4.64869534603904,0,0,0.336760265072938,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0.603821380773079,0.641136984606466 | ||
|short_description=p6@SYK | |short_description=p6@SYK | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p6@SYK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYK_5end |
Coexpression cluster: | NA |
Association with transcript: | -125bp_to_NM_001135052, NM_003177, uc004aqy.2, uc004aqz.2, uc004ara.2_5end |
EntrezGene: | SYK |
HGNC: | 11491 |
UniProt: | P43405A8K4G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.37e-31 | 14 |
lymphocyte of B lineage | 1.15e-24 | 24 |
pro-B cell | 1.15e-24 | 24 |
precursor B cell | 3.20e-17 | 3 |
antibody secreting cell | 2.07e-13 | 1 |
plasma cell | 2.07e-13 | 1 |
plasmablast | 2.07e-13 | 1 |
lymphoid lineage restricted progenitor cell | 4.20e-11 | 52 |
lymphocyte | 6.97e-11 | 53 |
common lymphoid progenitor | 6.97e-11 | 53 |
mature B cell | 2.40e-07 | 2 |
pre-B-II cell | 2.40e-07 | 2 |
transitional stage B cell | 2.40e-07 | 2 |
small pre-B-II cell | 2.40e-07 | 2 |
immature B cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 1.45e-18 | 11 |
early pharyngeal endoderm | 1.45e-18 | 11 |
maxillary sinus | 4.53e-14 | 1 |
paranasal sinus | 4.53e-14 | 1 |
thymus | 2.67e-13 | 4 |
hemolymphoid system gland | 2.67e-13 | 4 |
thymic region | 2.67e-13 | 4 |
pharyngeal gland | 2.67e-13 | 4 |
thymus primordium | 2.67e-13 | 4 |
neck | 9.07e-12 | 10 |
pharyngeal arch system | 1.86e-11 | 18 |
thyroid gland | 3.04e-11 | 5 |
pharyngeal pouch | 3.04e-11 | 5 |
thyroid diverticulum | 3.04e-11 | 5 |
pharyngeal pouch 2 | 3.04e-11 | 5 |
thyroid primordium | 3.04e-11 | 5 |
pharyngeal epithelium | 3.56e-09 | 6 |
hemopoietic organ | 5.47e-08 | 7 |
immune organ | 5.47e-08 | 7 |
throat | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.53e-14 | 1 |
maxillary sinus cancer | 4.53e-14 | 1 |