FFCP PHASE1:Hg19::chr2:46524897..46524911,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2034 | |EntrezGene=2034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3374 | |HGNC=3374 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467888_5end | |association_with_transcript=0bp_to_ENST00000467888_5end | ||
|cluster_id=chr2:46524897..46524911,+ | |||
|description=CAGE_peak_2_at_EPAS1_5end | |description=CAGE_peak_2_at_EPAS1_5end | ||
|id=chr2:46524897..46524911,+ | |id=chr2:46524897..46524911,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.89e-39!254;CL:0000223!6.31e-17!59;CL:0002076!3.13e-13!43;CL:0000076!2.43e-10!62;CL:0002368!3.18e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.89e-39!254;CL:0000223!6.31e-17!59;CL:0002076!3.13e-13!43;CL:0000076!2.43e-10!62;CL:0002368!3.18e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.32e-11;42!CL:0002368;1.05e-07;13!CL:0002251;2.41e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.30e-42,253;CL:0000223,2.76e-18,58;CL:0002076,1.32e-14,42;CL:0000076,7.33e-11,63;CL:0002368,1.40e-07,13;CL:0002251,3.00e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.07e-10;58!UBERON:0001041;2.55e-07;30!UBERON:0008947;2.76e-07;29!UBERON:0006595;4.91e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.58e-12!106;DOID:0050687!1.47e-07!143 | |ontology_enrichment_disease=DOID:305!2.58e-12!106;DOID:0050687!1.47e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.26e-12,106;DOID:0050687,1.69e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.04e-27!169;UBERON:0000925!6.04e-27!169;UBERON:0006595!6.04e-27!169;UBERON:0001007!4.27e-21!155;UBERON:0001555!4.27e-21!155;UBERON:0007026!4.27e-21!155;UBERON:0004921!7.25e-21!129;UBERON:0004185!7.25e-21!129;UBERON:0000077!7.20e-19!130;UBERON:0000062!6.49e-16!511;UBERON:0004111!1.35e-15!241;UBERON:0000481!2.07e-15!347;UBERON:0000477!2.54e-15!286;UBERON:0001041!3.33e-15!98;UBERON:0000064!2.35e-14!219;UBERON:0000467!6.43e-14!625;UBERON:0005911!6.65e-14!82;UBERON:0005177!7.15e-14!107;UBERON:0000480!8.11e-14!626;UBERON:0000466!8.20e-14!126;UBERON:0001048!2.81e-13!168;UBERON:0000468!4.46e-13!659;UBERON:0000483!1.90e-12!309;UBERON:0000119!6.39e-12!312;UBERON:0007023!3.28e-11!115;UBERON:0001004!4.65e-11!72;UBERON:0003104!6.89e-11!238;UBERON:0009142!6.89e-11!238;UBERON:0002050!7.72e-10!605;UBERON:0005423!7.72e-10!605;UBERON:0002530!7.82e-10!59;UBERON:0000922!8.41e-10!612;UBERON:0009569!8.87e-10!113;UBERON:0002365!9.28e-10!31;UBERON:0002330!9.28e-10!31;UBERON:0000923!9.83e-10!604;UBERON:0005291!9.83e-10!604;UBERON:0006598!9.83e-10!604;UBERON:0002532!9.83e-10!604;UBERON:0008947!1.75e-09!38;UBERON:0003258!1.75e-09!38;UBERON:0000464!1.88e-09!104;UBERON:0000025!2.17e-09!194;UBERON:0000065!3.99e-09!53;UBERON:0005631!1.69e-08!14;UBERON:0000158!1.69e-08!14;UBERON:0005153!1.70e-08!37;UBERON:0005157!2.70e-08!51;UBERON:0000475!6.38e-08!365;UBERON:0003929!2.19e-07!54;UBERON:0005178!2.79e-07!34;UBERON:0002224!2.79e-07!34;UBERON:0005181!4.09e-07!35;UBERON:0003103!5.21e-07!69;UBERON:0000063!7.18e-07!97;UBERON:0001008!7.64e-07!45;UBERON:0002100!8.81e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;4.63e-10;31!UBERON:0002330;4.63e-10;31!UBERON:0000065;2.36e-08;44!UBERON:0002530;3.93e-07;57!UBERON:0005911;5.07e-07;36!UBERON:0002423;6.30e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.67e-26,160;UBERON:0000925,4.67e-26,160;UBERON:0006595,4.67e-26,160;UBERON:0004921,2.40e-21,118;UBERON:0001007,1.13e-20,145;UBERON:0001555,1.13e-20,145;UBERON:0007026,1.13e-20,145;UBERON:0001041,1.23e-15,87;UBERON:0004111,3.22e-15,240;UBERON:0005911,4.13e-15,82;UBERON:0005177,1.16e-14,101;UBERON:0011216,1.02e-11,223;UBERON:0000483,1.31e-11,306;UBERON:0001048,1.48e-11,160;UBERON:0007023,4.90e-11,114;UBERON:0000119,6.52e-11,309;UBERON:0001004,7.98e-11,74;UBERON:0002530,1.52e-10,59;UBERON:0002365,2.84e-10,31;UBERON:0002330,2.84e-10,31;UBERON:0008947,4.74e-10,38;UBERON:0003258,4.74e-10,38;UBERON:0009569,1.40e-09,112;UBERON:0005153,3.03e-09,37;UBERON:0000065,3.71e-09,54;UBERON:0000025,5.00e-09,192;UBERON:0001008,5.31e-09,48;UBERON:0005631,6.20e-09,14;UBERON:0000158,6.20e-09,14;UBERON:0000922,9.21e-09,592;UBERON:0006554,1.25e-08,47;UBERON:0005157,1.37e-08,47;UBERON:0005423,2.39e-08,581;UBERON:0003929,7.08e-08,54;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005172,4.25e-07,54;UBERON:0005173,4.25e-07,54;UBERON:0002050,5.14e-07,564;UBERON:0009497,5.72e-07,25;UBERON:0000015,5.72e-07,25;UBERON:0002423,5.72e-07,25;UBERON:0006235,5.72e-07,25;UBERON:0004161,5.72e-07,25 | |||
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| ||
|short_description=p2@EPAS1 | |short_description=p2@EPAS1 | ||
}} | }} |
Latest revision as of 10:28, 17 September 2015
Short description: | p2@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000467888_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.30e-42 | 253 |
endodermal cell | 2.76e-18 | 58 |
endo-epithelial cell | 1.32e-14 | 42 |
squamous epithelial cell | 7.33e-11 | 63 |
respiratory epithelial cell | 1.40e-07 | 13 |
epithelial cell of alimentary canal | 3.00e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.26e-12 | 106 |
cell type cancer | 1.69e-08 | 143 |