FFCP PHASE1:Hg19::chr2:45166504..45166533,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-166bp_to_ENST00000437916_5end | |association_with_transcript=-166bp_to_ENST00000437916_5end | ||
|cluster_id=chr2:45166504..45166533,- | |||
|coexpression_cluster_id=C1022 | |||
|description=CAGE_peak_2_at_ENST00000437916_5end | |description=CAGE_peak_2_at_ENST00000437916_5end | ||
|id=chr2:45166504..45166533,- | |id=chr2:45166504..45166533,- | ||
|ontology_enrichment_celltype=CL:0000064!1.37e-12!3;CL:0005012!1.37e-12!3;CL:0000067!1.37e-12!3;CL:0002304!1.37e-12!3;CL:0002586!3.23e-12!3;CL:0002322!1.12e-11!5;CL:0002605!4.60e-11!3;CL:0000149!2.94e-09!4;CL:0000306!3.37e-09!4;CL:0002222!3.37e-09!4;CL:0002224!3.37e-09!4;CL:0000147!8.47e-09!14;CL:0000128!6.09e-08!7;CL:0000126!6.09e-08!7;CL:0000127!6.09e-08!7;CL:0002453!6.09e-08!7;CL:0000075!1.21e-07!27 | |ontology_enrichment_celltype=CL:0000064!1.37e-12!3;CL:0005012!1.37e-12!3;CL:0000067!1.37e-12!3;CL:0002304!1.37e-12!3;CL:0002586!3.23e-12!3;CL:0002322!1.12e-11!5;CL:0002605!4.60e-11!3;CL:0000149!2.94e-09!4;CL:0000306!3.37e-09!4;CL:0002222!3.37e-09!4;CL:0002224!3.37e-09!4;CL:0000147!8.47e-09!14;CL:0000128!6.09e-08!7;CL:0000126!6.09e-08!7;CL:0000127!6.09e-08!7;CL:0002453!6.09e-08!7;CL:0000075!1.21e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.48e-44;3!CL:0000067;4.48e-44;3!CL:0005012;4.48e-44;3!CL:0002304;4.48e-44;3!CL:0002586;6.82e-20;3!CL:0000306;2.38e-15;4!CL:0002222;2.38e-15;4!CL:0002224;2.38e-15;4!CL:0000149;3.54e-15;4!CL:0000075;2.06e-13;27!CL:0000710;3.90e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.49e-44,3;CL:0000067,4.49e-44,3;CL:0005012,4.49e-44,3;CL:0002304,4.49e-44,3;CL:0002586,5.91e-20,3;CL:0000306,2.22e-15,4;CL:0002222,2.22e-15,4;CL:0002224,2.22e-15,4;CL:0000149,3.18e-15,4;CL:0000075,2.01e-13,27;CL:0000710,3.91e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.40e-08;2 | |||
|ontology_enrichment_disease=DOID:4929!3.57e-08!2 | |ontology_enrichment_disease=DOID:4929!3.57e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.21e-15;1!DOID:3350;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.38e-15,1;DOID:3350,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.47e-33!11;UBERON:0000970!1.22e-24!20;UBERON:0002104!2.49e-23!21;UBERON:0000019!4.86e-22!19;UBERON:0000047!4.86e-22!19;UBERON:0004088!4.86e-22!19;UBERON:0003072!4.86e-22!19;UBERON:0003071!4.86e-22!19;UBERON:0004128!4.86e-22!19;UBERON:0000020!4.72e-21!23;UBERON:0003056!1.19e-20!61;UBERON:0001032!4.68e-20!24;UBERON:0004456!4.68e-20!24;UBERON:0001456!1.07e-19!21;UBERON:0002346!6.99e-17!90;UBERON:0000488!1.51e-15!4;UBERON:0003075!9.49e-15!86;UBERON:0007284!9.49e-15!86;UBERON:0005085!1.43e-13!29;UBERON:0001778!1.37e-12!3;UBERON:0001775!1.37e-12!3;UBERON:0000966!1.44e-12!5;UBERON:0005388!1.44e-12!5;UBERON:0001802!1.44e-12!5;UBERON:0001801!2.07e-12!14;UBERON:0001781!3.23e-12!3;UBERON:0001782!3.23e-12!3;UBERON:0005424!3.23e-12!3;UBERON:0000033!1.47e-10!123;UBERON:0002203!2.29e-10!6;UBERON:0001768!2.29e-10!6;UBERON:0002420!7.02e-10!9;UBERON:0007245!7.02e-10!9;UBERON:0010009!7.02e-10!9;UBERON:0010011!7.02e-10!9;UBERON:0000454!7.02e-10!9;UBERON:0000153!8.17e-10!129;UBERON:0007811!8.17e-10!129;UBERON:0010077!3.37e-09!4;UBERON:0005389!3.37e-09!4;UBERON:0000484!3.37e-09!4;UBERON:0002546!3.37e-09!4;UBERON:0000965!3.37e-09!4;UBERON:0001803!3.37e-09!4;UBERON:0003073!3.37e-09!4;UBERON:0005426!3.37e-09!4;UBERON:0000369!5.63e-09!4;UBERON:0002435!5.63e-09!4;UBERON:0000204!5.63e-09!4;UBERON:0010082!5.63e-09!4;UBERON:0009663!1.08e-08!7;UBERON:0002200!2.60e-08!11;UBERON:0006876!2.60e-08!11;UBERON:0000924!3.56e-08!173;UBERON:0006601!3.56e-08!173;UBERON:0005743!1.47e-07!86;UBERON:0001444!2.95e-07!48;UBERON:0004121!6.08e-07!169;UBERON:0002308!9.41e-07!9;UBERON:0000125!9.41e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.42e-63;11!UBERON:0000019;2.27e-47;19!UBERON:0000047;2.27e-47;19!UBERON:0004088;2.27e-47;19!UBERON:0010230;2.27e-47;19!UBERON:0000970;5.57e-45;20!UBERON:0001778;4.48e-44;3!UBERON:0001775;4.48e-44;3!UBERON:0002104;8.13e-43;21!UBERON:0001456;8.13e-43;21!UBERON:0000020;4.72e-39;23!UBERON:0001032;2.10e-37;24!UBERON:0004456;2.10e-37;24!UBERON:0000488;2.89e-33;4!UBERON:0000966;5.09e-26;5!UBERON:0005388;5.09e-26;5!UBERON:0001802;5.09e-26;5!UBERON:0001801;8.32e-26;14!UBERON:0002203;1.97e-22;6!UBERON:0001768;1.97e-22;6!UBERON:0002200;1.97e-22;6!UBERON:0010371;1.36e-20;31!UBERON:0001781;6.82e-20;3!UBERON:0001782;6.82e-20;3!UBERON:0005383;1.15e-19;3!UBERON:0005382;1.15e-19;3!UBERON:0001874;2.21e-15;1!UBERON:0010077;2.38e-15;4!UBERON:0005389;2.38e-15;4!UBERON:0000484;2.38e-15;4!UBERON:0000965;2.38e-15;4!UBERON:0001803;2.38e-15;4!UBERON:0000369;5.24e-15;4!UBERON:0002435;5.24e-15;4!UBERON:0000204;5.24e-15;4!UBERON:0006876;1.56e-12;11!UBERON:0001444;1.56e-11;48!UBERON:0000033;4.06e-11;50!UBERON:0009663;5.59e-09;7!UBERON:0001873;2.40e-08;2!UBERON:0000153;3.55e-08;54!UBERON:0007811;4.33e-08;52!UBERON:0002420;3.55e-07;9!UBERON:0000125;3.55e-07;9!UBERON:0007245;3.55e-07;9!UBERON:0002308;3.55e-07;9!UBERON:0010009;3.55e-07;9!UBERON:0010011;3.55e-07;9!UBERON:0000454;3.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.73e-63,11;UBERON:0000019,4.70e-45,20;UBERON:0000047,4.70e-45,20;UBERON:0010312,4.70e-45,20;UBERON:0004088,4.70e-45,20;UBERON:0010230,4.70e-45,20;UBERON:0003072,4.70e-45,20;UBERON:0004128,4.70e-45,20;UBERON:0003071,4.70e-45,20;UBERON:0001778,4.49e-44,3;UBERON:0001775,4.49e-44,3;UBERON:0000970,6.90e-43,21;UBERON:0002104,6.90e-43,21;UBERON:0001456,6.45e-41,22;UBERON:0000020,1.82e-37,24;UBERON:0001032,1.82e-37,24;UBERON:0004456,1.82e-37,24;UBERON:0000488,2.89e-33,4;UBERON:0005085,6.88e-29,31;UBERON:0001801,7.91e-26,14;UBERON:0002203,1.97e-22,6;UBERON:0001768,1.97e-22,6;UBERON:0002200,1.97e-22,6;UBERON:0003056,5.22e-22,61;UBERON:0000966,7.19e-22,6;UBERON:0005388,7.19e-22,6;UBERON:0001802,7.19e-22,6;UBERON:0001782,5.91e-20,3;UBERON:0005424,5.91e-20,3;UBERON:0005383,1.15e-19,3;UBERON:0005382,1.15e-19,3;UBERON:0001444,4.66e-18,49;UBERON:0003075,3.39e-16,82;UBERON:0007284,3.39e-16,82;UBERON:0000033,1.02e-15,56;UBERON:0001874,1.34e-15,1;UBERON:0002346,2.09e-15,86;UBERON:0010077,2.22e-15,4;UBERON:0005389,2.22e-15,4;UBERON:0000484,2.22e-15,4;UBERON:0002546,2.22e-15,4;UBERON:0000965,2.22e-15,4;UBERON:0001803,2.22e-15,4;UBERON:0003073,2.22e-15,4;UBERON:0005426,2.22e-15,4;UBERON:0001781,3.18e-15,4;UBERON:0000369,5.24e-15,4;UBERON:0002435,5.24e-15,4;UBERON:0000204,5.24e-15,4;UBERON:0010082,5.24e-15,4;UBERON:0000153,3.93e-14,62;UBERON:0007811,3.93e-14,62;UBERON:0010371,1.38e-12,104;UBERON:0006876,1.56e-12,11;UBERON:0010314,7.70e-12,132;UBERON:0009663,5.59e-09,7;UBERON:0001873,3.08e-08,2;UBERON:0010122,3.08e-08,2;UBERON:0000076,3.77e-08,8;UBERON:0002420,3.55e-07,9;UBERON:0000125,3.55e-07,9;UBERON:0007245,3.55e-07,9;UBERON:0002308,3.55e-07,9;UBERON:0010009,3.55e-07,9;UBERON:0010011,3.55e-07,9;UBERON:0000454,3.55e-07,9;UBERON:0004121,3.74e-07,171;UBERON:0000924,3.74e-07,171;UBERON:0006601,3.74e-07,171 | |||
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|short_description=p2@ENST00000437916 | |short_description=p2@ENST00000437916 | ||
}} | }} |
Latest revision as of 10:23, 29 July 2015
Short description: | p2@ENST00000437916 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000437916_5end |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | -166bp_to_ENST00000437916_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.49e-44 | 3 |
ciliated epithelial cell | 4.49e-44 | 3 |
multi-ciliated epithelial cell | 4.49e-44 | 3 |
non-pigmented ciliary epithelial cell | 4.49e-44 | 3 |
retinal pigment epithelial cell | 5.91e-20 | 3 |
crystallin accumulating cell | 2.22e-15 | 4 |
vertebrate lens cell | 2.22e-15 | 4 |
lens epithelial cell | 2.22e-15 | 4 |
visual pigment cell | 3.18e-15 | 4 |
columnar/cuboidal epithelial cell | 2.01e-13 | 27 |
neurecto-epithelial cell | 3.91e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.38e-15 | 1 |
mesenchymal cell neoplasm | 2.48e-08 | 2 |