FFCP PHASE1:Hg19::chr2:40944293..40944307,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:40944293..40944307,+ | |||
|coexpression_cluster_id=C4227 | |||
|description=CAGE_peak_at_chr2:40944293..40944307,+ | |description=CAGE_peak_at_chr2:40944293..40944307,+ | ||
|id=chr2:40944293..40944307,+ | |id=chr2:40944293..40944307,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.26e-21!23;CL:0000057!1.09e-09!75;CL:0000055!5.35e-09!180;CL:0002617!7.22e-07!2 | |ontology_enrichment_celltype=CL:0002620!1.26e-21!23;CL:0000057!1.09e-09!75;CL:0000055!5.35e-09!180;CL:0002617!7.22e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.75e-22;23!CL:0000062;2.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.75e-22,23;CL:0000057,3.01e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;2.95e-15;1!DOID:4231;1.93e-08;2!DOID:1907;1.93e-08;2!DOID:3451;2.77e-08;2!DOID:4159;2.77e-08;2!DOID:0060122;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.75e-15,1;DOID:4231,1.86e-08,2;DOID:1907,1.86e-08,2;DOID:3451,2.67e-08,2;DOID:4159,2.67e-08,2;DOID:0060122,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.60e-15!40;UBERON:0002199!5.72e-13!45;UBERON:0002416!5.72e-13!45;UBERON:0003102!1.19e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.98e-14;41!UBERON:0002199;7.95e-10;46!UBERON:0002416;7.95e-10;46!UBERON:0003102;1.67e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.68e-16,41;UBERON:0002199,1.17e-14,46;UBERON:0002416,1.17e-14,46;UBERON:0003102,1.86e-08,99 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,0,2.51145489964407,0.85422955527427,0,0.300091096084402,0,15.7160729427834,10.6086608109006,0.675105328965065,0.487185025805993,0.757301322732344,0.460249493211497,0,2.84007674013291,3.72782763442269,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.744323423456331,1.38115775959256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21945949464557,7.67338349261468,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,23.3431589846028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60038870528415,0.343395705182793,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,3.97261167496785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,1.10777426186905,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,0,2.51145489964407,0.85422955527427,0,0.300091096084402,0,15.7160729427834,10.6086608109006,0.675105328965065,0.487185025805993,0.757301322732344,0.460249493211497,0,2.84007674013291,3.72782763442269,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.744323423456331,1.38115775959256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21945949464557,7.67338349261468,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,23.3431589846028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60038870528415,0.343395705182793,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,3.97261167496785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,1.10777426186905,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:40944293..40944307,+ | |short_description=p@chr2:40944293..40944307,+ | ||
}} | }} |
Latest revision as of 10:08, 29 July 2015
Short description: | p@chr2:40944293..40944307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:40944293..40944307, + |
Coexpression cluster: | C4227_liposarcoma_Saos2_Fibroblast_mesenchymal_myxofibrosarcoma_immature_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.75e-22 | 23 |
fibroblast | 3.01e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.68e-16 | 41 |
integument | 1.17e-14 | 46 |
integumental system | 1.17e-14 | 46 |
surface structure | 1.86e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.75e-15 | 1 |
histiocytoma | 1.86e-08 | 2 |
malignant fibroxanthoma | 1.86e-08 | 2 |
skin carcinoma | 2.67e-08 | 2 |
skin cancer | 2.67e-08 | 2 |
integumentary system cancer | 2.67e-08 | 2 |