FFCP PHASE1:Hg19::chr2:241938405..241938416,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:241938405..241938416,+ | |||
|coexpression_cluster_id=C1156 | |||
|description=CAGE_peak_at_chr2:241938405..241938416,+ | |description=CAGE_peak_at_chr2:241938405..241938416,+ | ||
|id=chr2:241938405..241938416,+ | |id=chr2:241938405..241938416,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002602;1.54e-24;2!CL:0002564;3.85e-17;3!CL:0002591;6.05e-13;1!CL:0002549;2.82e-07;2!CL:0002363;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.45e-24,2;CL:0002564,3.85e-17,3;CL:0002591,7.68e-13,1;CL:0002549,2.74e-07,2;CL:0002363,4.98e-07,2;CL:0000008,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;4.17e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.02e-09!115;UBERON:0004905!2.97e-07!5;UBERON:0000982!2.97e-07!5;UBERON:0004770!2.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.17e-38;5!UBERON:0002216;2.17e-38;5!UBERON:0011134;2.17e-38;5!UBERON:0002209;2.17e-38;5!UBERON:0002213;2.17e-38;5!UBERON:0007844;2.17e-38;5!UBERON:0011138;2.17e-38;5!UBERON:0001130;2.17e-38;5!UBERON:0001066;2.17e-38;5!UBERON:0001468;2.17e-38;5!UBERON:0006444;1.54e-24;2!UBERON:0001995;1.54e-24;2!UBERON:0004715;1.54e-24;2!UBERON:0004905;3.78e-24;8!UBERON:0000982;3.78e-24;8!UBERON:0004770;3.78e-24;8!UBERON:0002242;3.85e-17;3!UBERON:0002418;1.04e-16;3!UBERON:0004755;1.04e-16;3!UBERON:0000075;3.19e-12;16!UBERON:0004765;1.96e-11;26!UBERON:0005629;2.82e-07;2!UBERON:0005358;2.82e-07;2!UBERON:0001886;2.82e-07;2!UBERON:0004086;2.82e-07;2!UBERON:0005282;2.82e-07;2!UBERON:0005281;2.82e-07;2!UBERON:0003566;4.17e-07;2!UBERON:0000078;4.17e-07;2!UBERON:0001777;4.17e-07;2!UBERON:0002012;4.17e-07;2!UBERON:0008886;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.08e-38,5;UBERON:0002216,2.08e-38,5;UBERON:0011134,2.08e-38,5;UBERON:0002209,2.08e-38,5;UBERON:0002213,2.08e-38,5;UBERON:0005856,2.08e-38,5;UBERON:0005866,2.08e-38,5;UBERON:0005863,2.08e-38,5;UBERON:0007844,2.08e-38,5;UBERON:0011138,2.08e-38,5;UBERON:0001130,2.08e-38,5;UBERON:0001066,2.08e-38,5;UBERON:0001468,2.08e-38,5;UBERON:0006444,1.45e-24,2;UBERON:0001995,1.45e-24,2;UBERON:0004715,1.45e-24,2;UBERON:0004905,3.68e-24,8;UBERON:0000982,3.68e-24,8;UBERON:0004770,3.68e-24,8;UBERON:0002242,3.85e-17,3;UBERON:0003068,3.85e-17,3;UBERON:0002328,3.85e-17,3;UBERON:0004880,3.85e-17,3;UBERON:0002418,1.00e-16,3;UBERON:0004755,1.00e-16,3;UBERON:0000075,3.15e-12,16;UBERON:0005629,2.74e-07,2;UBERON:0005358,2.74e-07,2;UBERON:0001886,2.74e-07,2;UBERON:0004086,2.74e-07,2;UBERON:0005282,2.74e-07,2;UBERON:0005281,2.74e-07,2;UBERON:0000078,4.69e-07,2;UBERON:0007497,4.69e-07,2;UBERON:0003643,4.69e-07,2;UBERON:0003504,4.69e-07,2;UBERON:0003469,4.69e-07,2;UBERON:0003496,4.69e-07,2;UBERON:0002012,4.69e-07,2;UBERON:0008886,4.69e-07,2;UBERON:0007303,4.69e-07,2;UBERON:0002061,4.69e-07,2;UBERON:0005432,4.69e-07,2;UBERON:0004363,4.69e-07,2;UBERON:0003566,4.98e-07,2;UBERON:0001777,4.98e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,3.46545788288131,1.32558950291166,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,1.24564449799115,0,0,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,2.88087962239999,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0.61417158655884,1.03325781175765,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0.757301322732344,0.184099797284599,0.80823028409406,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78496817704646,5.00170521059677,0.813795071099207,0.623912584592421,0.178428988797162,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.537101224341368,0.725083469571143,0.255679882248303,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,2.66943366478961,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0.118332000730565,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,1.41095188908457,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.572824424503484,0.404234377916439,0,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,3.46545788288131,1.32558950291166,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,1.24564449799115,0,0,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,2.88087962239999,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0.61417158655884,1.03325781175765,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0.757301322732344,0.184099797284599,0.80823028409406,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78496817704646,5.00170521059677,0.813795071099207,0.623912584592421,0.178428988797162,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.537101224341368,0.725083469571143,0.255679882248303,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,2.66943366478961,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0.118332000730565,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,1.41095188908457,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.572824424503484,0.404234377916439,0,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr2:241938405..241938416,+ | |short_description=p@chr2:241938405..241938416,+ | ||
}} | }} |
Latest revision as of 08:34, 29 July 2015
Short description: | p@chr2:241938405..241938416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:241938405..241938416, + |
Coexpression cluster: | C1156_Nucleus_Anulus_Mesenchymal_tenocyte_Pericytes_mesenchymal_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.45e-24 | 2 |
nucleus pulposus cell of intervertebral disc | 3.85e-17 | 3 |
smooth muscle cell of the pulmonary artery | 7.68e-13 | 1 |
fibroblast of choroid plexus | 2.74e-07 | 2 |
keratocyte | 4.98e-07 | 2 |
migratory cranial neural crest cell | 4.98e-07 | 2 |