FFCP PHASE1:Hg19::chr2:233385234..233385255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |EntrezGene=646960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |HGNC=39433 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |UniProt=P0CW18 | ||
|association_with_transcript=61bp_to_NM_001195129_5end | |association_with_transcript=61bp_to_NM_001195129_5end | ||
|cluster_id=chr2:233385234..233385255,+ | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_4_at_PRSS56_5end | |description=CAGE_peak_4_at_PRSS56_5end | ||
|id=chr2:233385234..233385255,+ | |id=chr2:233385234..233385255,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.71e-07!254 | |ontology_enrichment_celltype=CL:0000066!4.71e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.77e-51;29 | |||
|ontology_enrichment_disease=DOID:305!2.99e-13!106;DOID:0050687!1.15e-12!143;DOID:162!4.67e-09!235;DOID:14566!8.23e-09!239 | |ontology_enrichment_disease=DOID:305!2.99e-13!106;DOID:0050687!1.15e-12!143;DOID:162!4.67e-09!235;DOID:14566!8.23e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:305;7.50e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.18e-19,106;DOID:0050687,2.67e-14,143;DOID:162,7.82e-10,235;DOID:14566,1.33e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.18e-85!9;UBERON:0001557!1.21e-39!19;UBERON:0008947!7.00e-24!38;UBERON:0003258!7.00e-24!38;UBERON:0000072!1.76e-19!46;UBERON:0000065!1.02e-16!53;UBERON:0001004!6.40e-12!72;UBERON:0000063!2.73e-10!97;UBERON:0001041!3.73e-10!98;UBERON:0000077!3.11e-07!130;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!8.18e-85!9;UBERON:0001557!1.21e-39!19;UBERON:0008947!7.00e-24!38;UBERON:0003258!7.00e-24!38;UBERON:0000072!1.76e-19!46;UBERON:0000065!1.02e-16!53;UBERON:0001004!6.40e-12!72;UBERON:0000063!2.73e-10!97;UBERON:0001041!3.73e-10!98;UBERON:0000077!3.11e-07!130;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.35e-134;9!UBERON:0001557;2.35e-134;9!UBERON:0000072;1.20e-36;37!UBERON:0000065;4.35e-32;44!UBERON:0001004;1.04e-14;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.02e-134,9;UBERON:0001557,1.78e-63,19;UBERON:0008947,5.31e-39,38;UBERON:0003258,5.31e-39,38;UBERON:0000072,2.13e-31,47;UBERON:0000065,3.13e-27,54;UBERON:0001004,1.18e-19,74;UBERON:0001041,1.37e-16,87;UBERON:0004921,7.00e-12,118;UBERON:0001007,1.68e-09,145;UBERON:0001555,1.68e-09,145;UBERON:0007026,1.68e-09,145;UBERON:0001048,1.40e-08,160;UBERON:0004119,1.60e-08,160;UBERON:0000925,1.60e-08,160;UBERON:0006595,1.60e-08,160 | |||
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|short_description=p4@PRSS56 | |short_description=p4@PRSS56 | ||
}} | }} |
Latest revision as of 21:44, 15 September 2015
Short description: | p4@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRSS56_5end |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | 61bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.02e-134 | 9 |
upper respiratory tract | 1.78e-63 | 19 |
respiratory primordium | 5.31e-39 | 38 |
endoderm of foregut | 5.31e-39 | 38 |
segment of respiratory tract | 2.13e-31 | 47 |
respiratory tract | 3.13e-27 | 54 |
respiratory system | 1.18e-19 | 74 |
foregut | 1.37e-16 | 87 |
subdivision of digestive tract | 7.00e-12 | 118 |
digestive system | 1.68e-09 | 145 |
digestive tract | 1.68e-09 | 145 |
primitive gut | 1.68e-09 | 145 |
primordium | 1.40e-08 | 160 |
endoderm-derived structure | 1.60e-08 | 160 |
endoderm | 1.60e-08 | 160 |
presumptive endoderm | 1.60e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.18e-19 | 106 |
cell type cancer | 2.67e-14 | 143 |
cancer | 7.82e-10 | 235 |
disease of cellular proliferation | 1.33e-09 | 239 |