FFCP PHASE1:Hg19::chr2:216259278..216259288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=Q59G22 | |UniProt=Q59G22 | ||
|association_with_transcript=0bp_to_AB209287_5end | |association_with_transcript=0bp_to_AB209287_5end | ||
|cluster_id=chr2:216259278..216259288,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_51_at_FN1_5end | |description=CAGE_peak_51_at_FN1_5end | ||
|id=chr2:216259278..216259288,- | |id=chr2:216259278..216259288,- | ||
|ontology_enrichment_celltype=CL:0000055!2.55e-32!180;CL:0000057!4.41e-24!75;CL:0002371!8.23e-17!591;CL:0000144!7.54e-15!625;CL:0000680!2.34e-13!57;CL:0000056!2.34e-13!57;CL:0000355!2.34e-13!57;CL:0000183!3.33e-12!59;CL:0000187!3.50e-12!54;CL:0000048!1.08e-11!430;CL:0000723!6.24e-11!436;CL:0000393!3.71e-10!60;CL:0000211!3.71e-10!60;CL:0000034!3.91e-10!444;CL:0000548!9.08e-10!679;CL:0000004!9.08e-10!679;CL:0000255!9.08e-10!679;CL:0002620!1.46e-09!23;CL:0000012!2.60e-09!682;CL:0002334!9.15e-09!12;CL:0002494!8.02e-08!16;CL:0000192!1.01e-07!42;CL:0000514!1.01e-07!42;CL:0000220!1.07e-07!246;CL:0000222!1.30e-07!119;CL:0002321!2.23e-07!248;CL:0000359!2.90e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.55e-32!180;CL:0000057!4.41e-24!75;CL:0002371!8.23e-17!591;CL:0000144!7.54e-15!625;CL:0000680!2.34e-13!57;CL:0000056!2.34e-13!57;CL:0000355!2.34e-13!57;CL:0000183!3.33e-12!59;CL:0000187!3.50e-12!54;CL:0000048!1.08e-11!430;CL:0000723!6.24e-11!436;CL:0000393!3.71e-10!60;CL:0000211!3.71e-10!60;CL:0000034!3.91e-10!444;CL:0000548!9.08e-10!679;CL:0000004!9.08e-10!679;CL:0000255!9.08e-10!679;CL:0002620!1.46e-09!23;CL:0000012!2.60e-09!682;CL:0002334!9.15e-09!12;CL:0002494!8.02e-08!16;CL:0000192!1.01e-07!42;CL:0000514!1.01e-07!42;CL:0000220!1.07e-07!246;CL:0000222!1.30e-07!119;CL:0002321!2.23e-07!248;CL:0000359!2.90e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.15e-13;55!CL:0002334;1.32e-11;12!CL:0000723;1.85e-11;61!CL:0000048;1.69e-10;58!CL:0002620;9.24e-10;23!CL:0002320;1.02e-09;188!CL:0000057;1.98e-09;73!CL:0000034;2.02e-09;69!CL:0000349;1.36e-08;19!CL:0002494;6.41e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.11e-25,76;CL:0000048,3.08e-17,427;CL:0000723,2.19e-16,433;CL:0000034,2.69e-15,441;CL:0002320,2.89e-13,361;CL:0002334,9.17e-12,12;CL:0000134,4.44e-11,354;CL:0002620,7.72e-10,23;CL:0000219,7.42e-09,386;CL:0000349,1.21e-08,19;CL:0002494,8.22e-08,16;CL:0000680,2.94e-07,58;CL:0000056,2.94e-07,58;CL:0000355,2.94e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.49e-15!83;UBERON:0002329!2.49e-15!83;UBERON:0003077!2.49e-15!83;UBERON:0003059!2.49e-15!83;UBERON:0007282!2.49e-15!83;UBERON:0009618!2.49e-15!83;UBERON:0007285!2.49e-15!83;UBERON:0005256!3.35e-14!143;UBERON:0004290!5.04e-14!70;UBERON:0000486!7.58e-13!82;UBERON:0001134!1.01e-11!61;UBERON:0002036!1.01e-11!61;UBERON:0003082!1.01e-11!61;UBERON:0002385!1.14e-11!63;UBERON:0001015!1.14e-11!63;UBERON:0000383!1.14e-11!63;UBERON:0002199!2.05e-10!45;UBERON:0002416!2.05e-10!45;UBERON:0004872!5.96e-10!84;UBERON:0003914!6.61e-10!118;UBERON:0002100!1.19e-09!216;UBERON:0002049!1.57e-09!79;UBERON:0007798!1.57e-09!79;UBERON:0003102!5.25e-09!95;UBERON:0004535!8.44e-09!110;UBERON:0004923!1.22e-08!57;UBERON:0001009!1.31e-08!113;UBERON:0002097!3.09e-08!40;UBERON:0000948!7.49e-08!24;UBERON:0005498!7.49e-08!24;UBERON:0004140!7.49e-08!24;UBERON:0009881!7.49e-08!24;UBERON:0004141!7.49e-08!24;UBERON:0003084!7.49e-08!24;UBERON:0007005!7.49e-08!24;UBERON:0004139!7.49e-08!24;UBERON:0004291!7.49e-08!24;UBERON:0001637!9.02e-08!42;UBERON:0003509!9.02e-08!42;UBERON:0004572!9.02e-08!42;UBERON:0000490!1.64e-07!138;UBERON:0001013!2.96e-07!14;UBERON:0005631!3.67e-07!14;UBERON:0000158!3.67e-07!14;UBERON:0007100!3.92e-07!27;UBERON:0000055!4.30e-07!69;UBERON:0000478!7.03e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.93e-09;14!UBERON:0002384;7.15e-08;198!UBERON:0000478;8.50e-08;24!UBERON:0002199;1.16e-07;46!UBERON:0002416;1.16e-07;46!UBERON:0005631;3.66e-07;10!UBERON:0000158;3.66e-07;10!UBERON:0002097;6.71e-07;41!UBERON:0003688;7.32e-07;6!UBERON:0002358;7.32e-07;6!UBERON:0003684;7.32e-07;6!UBERON:0001178;7.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.15e-13,371;UBERON:0002199,1.93e-11,46;UBERON:0002416,1.93e-11,46;UBERON:0001013,9.02e-09,14;UBERON:0002097,1.28e-08,41;UBERON:0007503,3.65e-08,78;UBERON:0000478,6.06e-08,24;UBERON:0005631,7.80e-08,14;UBERON:0000158,7.80e-08,14;UBERON:0007524,9.60e-08,73;UBERON:0002329,1.64e-07,71;UBERON:0003059,1.64e-07,71;UBERON:0007282,1.64e-07,71;UBERON:0004290,1.64e-07,71;UBERON:0009618,1.64e-07,71;UBERON:0003077,2.81e-07,72;UBERON:0007285,2.81e-07,72;UBERON:0004872,4.70e-07,83;UBERON:0003688,5.35e-07,6;UBERON:0002358,5.35e-07,6;UBERON:0003684,5.35e-07,6;UBERON:0001178,5.35e-07,6 | |||
|phase1_expression=3.99692434395225,11.5614282901131,4.65149533516705,7.00513088471913,1.78784437770915,5.23403114460221,5.06599756336621,2.52687949370732,1.04474251279935,0.491467873003018,0.697801167972428,1.96597234917155,3.16520373874144,1.23766352960047,2.31978163009541,0.672325146451775,2.41077811209591,2.92124036154949,2.43966399395253,0.123121058076788,0.816002764977012,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,4.02420515822182,1.02290049474824,2.89151321907653,3.50936537445123,1.59331170856906,29.4255800408907,61.3159936581321,0.283604451492204,0.886917589850256,0.966182642624386,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.10047216776027,0.417989933073621,0.516833518338658,0,1.00416183829401,0,0,0,0,3.24056779152704,0.267899184852239,0,0,1.53316637465883,0,0.183201743930407,0,0,0,11.9273268406876,3.67228483827281,4.63432132846266,18.0707071071753,3.54668382198357,1.12135520028461,2.1349799145941,8.38669664618344,3.42332138939743,3.63718814588158,1.63461903113459,6.65972681637698,4.60940739583999,0.937285727335186,5.30672130611545,0,4.18456305545043,0.939475989150119,0.809364721840658,0.702254033511242,0.61246251376468,0.859840221182376,1.54988671763648,0,1.48360157567134,6.37112953356618,2.15585442544872,1.5150250255866,0.625592599359821,0.277064115484183,0.438977620880838,3.37136575378922,1.05166641234618,1.92834711372036,6.99619579186562,2.13557388818567,4.4505699243508,4.80145753735044,3.81294358182224,9.53269998168828,1.67505170698431,3.88185564154912,3.11798416515836,12.1168211637175,2.39329736469978,3.39456719319505,7.10019185033229,2.21654616100809,1.52604533079439,0.193260853163297,1.90922284413584,0.286804595389004,0,0,0.348581828608555,0.207322110030741,0,0,1.56449532329816,3.85944562915731,2.76269842704961,6.96551892047969,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.614942192715568,0.514703430895577,0.219500570817251,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,0,1.87853910777315,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0.234004265139238,0,0,1.84780341018745,0,1.43293636324557,0.871901815541886,1.15014803749563,0,0,0.207328115540772,0,0,0,0.763976851116555,0,1.71072446022705,1.23392991243988,0,0,1.23344192779897,1.30788020649984,0.80672114403045,2.19761916788222,21.4593867511129,3.381211010224,2.12750493267896,1.04007436911366,1.54324424557285,2.83698264046557,1.5985330740966,1.00084595560703,3.25572963234866,0.823240336780769,0.977208552881205,0.355391948742546,0,1.20575750823834,2.61460037580088,0.699810938274399,1.2162378064119,0,4.21667878966063,2.15662369942424,9.18895486672911,1.42636905040718,1.59259437334337,3.08214483825575,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,2.50085260529839,2.17012018959788,4.15941723061614,12.133171238207,2.99634588564476,2.6942525448324,2.70851489754947,2.27407504055985,4.1389228517002,2.65690239414175,0.921845842708516,1.21637060255316,1.37060810223918,4.11772108573027,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,6.94701861892575,8.5938705041315,7.57782254969299,4.10045277618243,6.65219423786715,7.88184213603677,4.45254199334973,3.85524234506639,4.6166048581413,1.64254312027618,1.55776328755086,2.20799719073923,0.604297247958111,7.01772646061497,0.0920809889358963,0.229628896329213,0.728364672026868,0.786746489756545,0,0.15403067420883,0,1.46139224653261,0.316654886678627,1.13733384070897,0,1.51141141271498,4.62681758070868,1.35473218771926,0,0,0,0,0,0,0,0.656029291399411,0,0.9273691048295,0,0,1.14853107599234,0.650060246036521,0,0.870036464629098,2.92692372517824,3.22357716924872,2.06754858726796,3.75970857038958,5.075584286998,1.36362603865761,0.890320356467374,1.81813406897076,2.11409074101617,2.4246415373971,1.71968227454435,0.929691098594572,21.4072395844835,0.6970372701606,1.23213432070436,0,0,1.11194531462352,0.143124886741991,0.744316738719335,2.53103539774981,0.571890581771475,0.255897791311334,0.855877976067841,0.95460974377781,1.56989728039846,0.539617372749944,1.92175920815238,0.589062011728432,0.404364963146632,1.58510321173008,0.421258456238981,0,0.974853958525138,0,0.272999822815972,0.989838023675989,4.52032466480971,1.65409603063837,0.66343897524122,1.31535265576129,5.20897980840019,0,1.21746226177622,1.239293992399,2.25356482025793,0.430234056612155,1.27723753317057,3.21003946333125,0.709522128141196,0.844430541190656,3.29294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,1.03558180854457,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49112314896687,0.593929361665277,2.15012491469462,0,0,3.56187856073299,0,0,1.19548792950642,0,0,0,0,8.087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| ||
|short_description=p51@FN1 | |short_description=p51@FN1 | ||
}} | }} |
Latest revision as of 03:14, 20 September 2015
Short description: | p51@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_AB209287_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | Q59G22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.11e-25 | 76 |
multi fate stem cell | 3.08e-17 | 427 |
somatic stem cell | 2.19e-16 | 433 |
stem cell | 2.69e-15 | 441 |
connective tissue cell | 2.89e-13 | 361 |
preadipocyte | 9.17e-12 | 12 |
mesenchymal cell | 4.44e-11 | 354 |
skin fibroblast | 7.72e-10 | 23 |
motile cell | 7.42e-09 | 386 |
extraembryonic cell | 1.21e-08 | 19 |
cardiocyte | 8.22e-08 | 16 |
muscle precursor cell | 2.94e-07 | 58 |
myoblast | 2.94e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.94e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.15e-13 | 371 |
integument | 1.93e-11 | 46 |
integumental system | 1.93e-11 | 46 |
adipose tissue | 9.02e-09 | 14 |
skin of body | 1.28e-08 | 41 |
epithelial vesicle | 3.65e-08 | 78 |
extraembryonic structure | 6.06e-08 | 24 |
extraembryonic membrane | 7.80e-08 | 14 |
membranous layer | 7.80e-08 | 14 |
dense mesenchyme tissue | 9.60e-08 | 73 |
somite | 1.64e-07 | 71 |
presomitic mesoderm | 1.64e-07 | 71 |
presumptive segmental plate | 1.64e-07 | 71 |
dermomyotome | 1.64e-07 | 71 |
trunk paraxial mesoderm | 1.64e-07 | 71 |
paraxial mesoderm | 2.81e-07 | 72 |
presumptive paraxial mesoderm | 2.81e-07 | 72 |
splanchnic layer of lateral plate mesoderm | 4.70e-07 | 83 |
omentum | 5.35e-07 | 6 |
peritoneum | 5.35e-07 | 6 |
abdominal cavity | 5.35e-07 | 6 |
visceral peritoneum | 5.35e-07 | 6 |