FFCP PHASE1:Hg19::chr2:21229034..21229041,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-477bp_to_M12413_5end | |association_with_transcript=-477bp_to_M12413_5end | ||
|cluster_id=chr2:21229034..21229041,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_72_at_APOB_5end | |description=CAGE_peak_72_at_APOB_5end | ||
|id=chr2:21229034..21229041,- | |id=chr2:21229034..21229041,- | ||
|ontology_enrichment_celltype=CL:0000181!1.39e-47!12;CL:0000417!1.39e-47!12;CL:0000668!1.39e-47!12;CL:0000414!1.39e-47!12;CL:0000412!1.39e-47!12;CL:0000182!1.39e-47!12;CL:0000223!5.94e-12!59 | |ontology_enrichment_celltype=CL:0000181!1.39e-47!12;CL:0000417!1.39e-47!12;CL:0000668!1.39e-47!12;CL:0000414!1.39e-47!12;CL:0000412!1.39e-47!12;CL:0000182!1.39e-47!12;CL:0000223!5.94e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.00e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.84e-44,12;CL:0000223,1.09e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.59e-48;11!UBERON:0009497;9.82e-41;13!UBERON:0001041;4.37e-18;30!UBERON:0003104;2.43e-17;31!CL:0000223;1.54e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.40e-49!19;UBERON:0006925!2.40e-49!19;UBERON:0008836!2.40e-49!19;UBERON:0008835!1.68e-42!22;UBERON:0003894!1.68e-42!22;UBERON:0009854!1.29e-40!23;UBERON:0007499!2.69e-37!25;UBERON:0009497!2.69e-37!25;UBERON:0000015!2.69e-37!25;UBERON:0002423!2.69e-37!25;UBERON:0006235!2.69e-37!25;UBERON:0004161!2.69e-37!25;UBERON:0005057!7.93e-36!26;UBERON:0009856!7.93e-36!26;UBERON:0002365!6.70e-30!31;UBERON:0002330!6.70e-30!31;UBERON:0002368!2.24e-26!35;UBERON:0003929!1.26e-20!54;UBERON:0000949!2.69e-20!45;UBERON:0002530!8.92e-19!59;UBERON:0005172!2.02e-16!55;UBERON:0005173!2.02e-16!55;UBERON:0002417!1.06e-14!61;UBERON:0000916!1.06e-14!61;UBERON:0004921!1.34e-13!129;UBERON:0004185!1.34e-13!129;UBERON:0005911!3.68e-13!82;UBERON:0001007!4.89e-11!155;UBERON:0001555!4.89e-11!155;UBERON:0007026!4.89e-11!155;UBERON:0004119!5.59e-10!169;UBERON:0000925!5.59e-10!169;UBERON:0006595!5.59e-10!169;UBERON:0001041!9.72e-09!98;UBERON:0000466!4.12e-08!126;UBERON:0005177!6.57e-08!107;UBERON:0000077!8.12e-08!130;UBERON:0002108!1.40e-07!14;UBERON:0009569!1.99e-07!113;UBERON:0000490!2.76e-07!138;UBERON:0002405!3.31e-07!115;UBERON:0003914!4.58e-07!118;UBERON:0005256!5.52e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!2.40e-49!19;UBERON:0006925!2.40e-49!19;UBERON:0008836!2.40e-49!19;UBERON:0008835!1.68e-42!22;UBERON:0003894!1.68e-42!22;UBERON:0009854!1.29e-40!23;UBERON:0007499!2.69e-37!25;UBERON:0009497!2.69e-37!25;UBERON:0000015!2.69e-37!25;UBERON:0002423!2.69e-37!25;UBERON:0006235!2.69e-37!25;UBERON:0004161!2.69e-37!25;UBERON:0005057!7.93e-36!26;UBERON:0009856!7.93e-36!26;UBERON:0002365!6.70e-30!31;UBERON:0002330!6.70e-30!31;UBERON:0002368!2.24e-26!35;UBERON:0003929!1.26e-20!54;UBERON:0000949!2.69e-20!45;UBERON:0002530!8.92e-19!59;UBERON:0005172!2.02e-16!55;UBERON:0005173!2.02e-16!55;UBERON:0002417!1.06e-14!61;UBERON:0000916!1.06e-14!61;UBERON:0004921!1.34e-13!129;UBERON:0004185!1.34e-13!129;UBERON:0005911!3.68e-13!82;UBERON:0001007!4.89e-11!155;UBERON:0001555!4.89e-11!155;UBERON:0007026!4.89e-11!155;UBERON:0004119!5.59e-10!169;UBERON:0000925!5.59e-10!169;UBERON:0006595!5.59e-10!169;UBERON:0001041!9.72e-09!98;UBERON:0000466!4.12e-08!126;UBERON:0005177!6.57e-08!107;UBERON:0000077!8.12e-08!130;UBERON:0002108!1.40e-07!14;UBERON:0009569!1.99e-07!113;UBERON:0000490!2.76e-07!138;UBERON:0002405!3.31e-07!115;UBERON:0003914!4.58e-07!118;UBERON:0005256!5.52e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-62;19!UBERON:0006925;2.55e-62;19!UBERON:0002423;1.50e-47;25!UBERON:0002365;1.46e-38;31!UBERON:0002330;1.46e-38;31!UBERON:0002368;1.15e-30;33!UBERON:0000949;4.17e-24;43!UBERON:0005172;2.94e-16;52!UBERON:0005173;2.94e-16;52!UBERON:0002417;3.15e-14;58!UBERON:0000916;3.15e-14;58!UBERON:0002530;1.42e-13;57!UBERON:0001007;1.53e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.55e-62,19;UBERON:0006925,2.55e-62,19;UBERON:0008836,2.55e-62,19;UBERON:0008835,6.24e-54,22;UBERON:0003894,6.24e-54,22;UBERON:0009854,1.28e-51,23;UBERON:0007499,1.50e-47,25;UBERON:0009497,1.50e-47,25;UBERON:0000015,1.50e-47,25;UBERON:0002423,1.50e-47,25;UBERON:0006235,1.50e-47,25;UBERON:0004161,1.50e-47,25;UBERON:0009856,9.44e-46,26;UBERON:0002365,1.73e-38,31;UBERON:0002330,1.73e-38,31;UBERON:0002368,3.60e-34,35;UBERON:0000949,1.01e-26,45;UBERON:0003929,2.29e-22,54;UBERON:0005172,2.29e-22,54;UBERON:0005173,2.29e-22,54;UBERON:0002530,1.61e-20,59;UBERON:0002417,3.46e-20,60;UBERON:0000916,3.46e-20,60;UBERON:0005911,6.57e-15,82;UBERON:0001041,4.44e-14,87;UBERON:0005177,3.45e-12,101;UBERON:0009569,4.95e-11,112;UBERON:0003914,1.41e-10,117;UBERON:0004921,2.09e-10,118;UBERON:0005256,3.69e-10,122;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0001048,7.94e-08,160;UBERON:0003104,7.94e-08,160;UBERON:0009142,7.94e-08,160;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,0.982827216677626,2.36315962672562,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.988990300573997,1.3480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,0.982827216677626,2.36315962672562,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.988990300573997,1.3480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p72@APOB | |short_description=p72@APOB | ||
}} | }} |
Latest revision as of 23:02, 19 September 2015
Short description: | p72@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_72_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -477bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.84e-44 | 12 |
endodermal cell | 1.09e-09 | 58 |