FFCP PHASE1:Hg19::chr2:19553530..19553547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130497 | |EntrezGene=130497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8111 | |HGNC=8111 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_AB590510,AM393368_5end | |association_with_transcript=18bp_to_AB590510,AM393368_5end | ||
|cluster_id=chr2:19553530..19553547,- | |||
|description=CAGE_peak_3_at_OSR1_5end | |description=CAGE_peak_3_at_OSR1_5end | ||
|id=chr2:19553530..19553547,- | |id=chr2:19553530..19553547,- | ||
|ontology_enrichment_celltype=CL:0000057!3.89e-11!75;CL:0002334!8.58e-08!12 | |ontology_enrichment_celltype=CL:0000057!3.89e-11!75;CL:0002334!8.58e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.26e-25;3!CL:0000349;4.56e-20;19!CL:0002537;6.17e-15;5!CL:0000511;2.54e-09;1!CL:0002625;2.54e-09;1!CL:0000216;2.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.58e-25,3;CL:0000349,5.08e-20,19;CL:0002537,5.37e-15,5;CL:0000511,1.32e-09,1;CL:0002625,1.32e-09,1;CL:0000216,1.32e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.54e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.61e-09!14;UBERON:0000158!1.61e-09!14;UBERON:0004871!3.26e-09!8;UBERON:0004923!1.51e-08!57;UBERON:0000305!7.80e-08!7 | |ontology_enrichment_uberon=UBERON:0005631!1.61e-09!14;UBERON:0000158!1.61e-09!14;UBERON:0004871!3.26e-09!8;UBERON:0004923!1.51e-08!57;UBERON:0000305!7.80e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.44e-19;4!UBERON:0000478;9.84e-16;24!UBERON:0000305;7.94e-11;7!UBERON:0002079;2.54e-09;1!UBERON:0001136;2.54e-09;1!UBERON:0001343;2.54e-09;1!UBERON:0004910;2.54e-09;1!UBERON:0004813;2.54e-09;1!UBERON:0005631;1.00e-07;10!UBERON:0000158;1.00e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.11e-20,14;UBERON:0000158,2.11e-20,14;UBERON:0001987,3.79e-19,4;UBERON:0004340,3.79e-19,4;UBERON:0004871,2.40e-16,8;UBERON:0000478,1.07e-15,24;UBERON:0003124,3.52e-11,7;UBERON:0000305,7.20e-11,7;UBERON:0001136,1.32e-09,1;UBERON:0001343,1.32e-09,1;UBERON:0004910,1.32e-09,1;UBERON:0005154,1.32e-09,1;UBERON:0005295,1.32e-09,1;UBERON:0004813,1.32e-09,1;UBERON:0005297,1.32e-09,1;UBERON:0005294,1.32e-09,1;UBERON:0010141,1.32e-09,1;UBERON:0005891,1.32e-09,1;UBERON:0002079,1.99e-09,1;UBERON:0004923,1.64e-08,66 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0.662045904066094,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0,0,1.23633464639278,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,1.20190447125277,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,0,1.14861935834114,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.783204629850962,1.02943027143257,0,0,0,1.21251028578504,4.99306318531491,2.11673205330776,0.496215615637554,0,0.280660094433074,0.896974044789907,0,0.321707842287215,0,0.462629081407967,0.532685175939381,0.492762936082855,0.519254429183621,0.348631135379878,0,0,0.184161977871793,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0.545999645631943,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.48482340416319,1.53580351049616,0,0,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0.311039587661807,0,0.179021174675609,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.189559738885464,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,1.42939065274673,0.662091970365432,0,3.80099721227599,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,1.77962244319307,0,0.907385542579434,0,0,0.159296767163702,0.449803112163605,0.155262956876259,1.24411862352257,0.265841714557995,0,0,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.655678681511872,0,1.22574160876953,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0,0,0,1.0661699095049,0.952257725854961,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0.435433495793923,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 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|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0.662045904066094,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0,0,1.23633464639278,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,1.20190447125277,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,0,1.14861935834114,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.783204629850962,1.02943027143257,0,0,0,1.21251028578504,4.99306318531491,2.11673205330776,0.496215615637554,0,0.280660094433074,0.896974044789907,0,0.321707842287215,0,0.462629081407967,0.532685175939381,0.492762936082855,0.519254429183621,0.348631135379878,0,0,0.184161977871793,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0.545999645631943,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.48482340416319,1.53580351049616,0,0,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0.311039587661807,0,0.179021174675609,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.189559738885464,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,1.42939065274673,0.662091970365432,0,3.80099721227599,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,1.77962244319307,0,0.907385542579434,0,0,0.159296767163702,0.449803112163605,0.155262956876259,1.24411862352257,0.265841714557995,0,0,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.655678681511872,0,1.22574160876953,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0,0,0,1.0661699095049,0.952257725854961,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0.435433495793923,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p3@OSR1 | |short_description=p3@OSR1 | ||
}} | }} |
Latest revision as of 06:01, 19 September 2015
Short description: | p3@OSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_AB590510, AM393368_5end |
EntrezGene: | OSR1 |
HGNC: | 8111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.58e-25 | 3 |
extraembryonic cell | 5.08e-20 | 19 |
amnion mesenchymal stem cell | 5.37e-15 | 5 |
androgen binding protein secreting cell | 1.32e-09 | 1 |
seminiferous tubule epithelial cell | 1.32e-09 | 1 |
Sertoli cell | 1.32e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.11e-20 | 14 |
membranous layer | 2.11e-20 | 14 |
placenta | 3.79e-19 | 4 |
allantois | 3.79e-19 | 4 |
somatic layer of lateral plate mesoderm | 2.40e-16 | 8 |
extraembryonic structure | 1.07e-15 | 24 |
chorion | 3.52e-11 | 7 |
amnion | 7.20e-11 | 7 |
mesothelium | 1.32e-09 | 1 |
seminiferous tubule of testis | 1.32e-09 | 1 |
epithelium of male gonad | 1.32e-09 | 1 |
epithelial cord | 1.32e-09 | 1 |
sex cord | 1.32e-09 | 1 |
seminiferous tubule epithelium | 1.32e-09 | 1 |
testis sex cord | 1.32e-09 | 1 |
genital ridge | 1.32e-09 | 1 |
primitive sex cord of indifferent gonad | 1.32e-09 | 1 |
coelomic epithelium | 1.32e-09 | 1 |
left cardiac atrium | 1.99e-09 | 1 |
organ component layer | 1.64e-08 | 66 |