FFCP PHASE1:Hg19::chr2:189859546..189859562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189859546..189859562,- | |||
|coexpression_cluster_id=C1051 | |||
|description=CAGE_peak_at_chr2:189859546..189859562,- | |description=CAGE_peak_at_chr2:189859546..189859562,- | ||
|id=chr2:189859546..189859562,- | |id=chr2:189859546..189859562,- | ||
|ontology_enrichment_celltype=CL:0000055!2.96e-20!180;CL:0000057!4.47e-16!75;CL:0000187!9.21e-12!54;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0000183!8.85e-11!59;CL:0000393!1.57e-09!60;CL:0000211!1.57e-09!60;CL:0000048!1.05e-07!430;CL:0000192!1.94e-07!42;CL:0000514!1.94e-07!42;CL:0000723!3.66e-07!436;CL:0000034!9.52e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.96e-20!180;CL:0000057!4.47e-16!75;CL:0000187!9.21e-12!54;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0000183!8.85e-11!59;CL:0000393!1.57e-09!60;CL:0000211!1.57e-09!60;CL:0000048!1.05e-07!430;CL:0000192!1.94e-07!42;CL:0000514!1.94e-07!42;CL:0000723!3.66e-07!436;CL:0000034!9.52e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000499;2.28e-08;28!CL:0000135;4.03e-08;3!CL:0000388;4.03e-08;3!CL:0002504;2.05e-07;3!CL:1000279;2.05e-07;3!CL:1000280;2.05e-07;3!CL:0000136;8.54e-07;13!CL:0002615;9.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,2.22e-08,28;CL:0000135,4.02e-08,3;CL:0000388,4.02e-08,3;CL:0000057,6.62e-08,76;CL:0002504,2.04e-07,3;CL:1000279,2.04e-07,3;CL:1000280,2.04e-07,3;CL:0000136,3.15e-07,15;CL:0000632,7.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.02e-13!70;UBERON:0002385!1.10e-12!63;UBERON:0001015!1.10e-12!63;UBERON:0000383!1.10e-12!63;UBERON:0000914!4.84e-12!83;UBERON:0002329!4.84e-12!83;UBERON:0003077!4.84e-12!83;UBERON:0003059!4.84e-12!83;UBERON:0007282!4.84e-12!83;UBERON:0009618!4.84e-12!83;UBERON:0007285!4.84e-12!83;UBERON:0001134!5.41e-12!61;UBERON:0002036!5.41e-12!61;UBERON:0003082!5.41e-12!61;UBERON:0000486!7.05e-11!82;UBERON:0000478!8.74e-09!24;UBERON:0005256!5.86e-08!143 | |ontology_enrichment_uberon=UBERON:0004290!4.02e-13!70;UBERON:0002385!1.10e-12!63;UBERON:0001015!1.10e-12!63;UBERON:0000383!1.10e-12!63;UBERON:0000914!4.84e-12!83;UBERON:0002329!4.84e-12!83;UBERON:0003077!4.84e-12!83;UBERON:0003059!4.84e-12!83;UBERON:0007282!4.84e-12!83;UBERON:0009618!4.84e-12!83;UBERON:0007285!4.84e-12!83;UBERON:0001134!5.41e-12!61;UBERON:0002036!5.41e-12!61;UBERON:0003082!5.41e-12!61;UBERON:0000486!7.05e-11!82;UBERON:0000478!8.74e-09!24;UBERON:0005256!5.86e-08!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.03e-08;3!UBERON:0000043;4.03e-08;3!UBERON:0007845;4.03e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.02e-08,3;UBERON:0000043,4.02e-08,3;UBERON:0007845,4.02e-08,3 | |||
|phase1_expression=0.363356758541113,1.71280419112787,1.12763523276777,1.0007329835313,9.83314407740033,6.10636966870258,2.53299878168311,0,1.30592814099919,0,0,1.09220686065086,1.05506791291381,1.36142988256051,0.331397375727916,0,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.895037932904712,0.722878304769133,1.00267582127178,5.35932120155048,0,1.94653948121054,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0.662045904066094,2.58152958673932,0,2.24271040056923,0,0.74000264525148,0.622422070799533,1.0776853765575,0.163461903113459,0.151357427644931,1.72852777344,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.309977343527296,0,1.97813543422845,0,1.43723628363248,0,0,0,0,2.14541457059314,1.05166641234618,0.794025282120147,0.358779271377724,1.06778694409284,1.69545520927649,0.300091096084402,0,2.06112432036503,0.930584281657949,0.337552664482532,0.194874010322397,1.00973509697646,0.736399189138395,0.646584227275248,0,0,0.67824236924195,0,0,0,0,0,0.348581828608555,0,0,0,0,1.92972281457866,0,1.39310378409594,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0.797814349754612,2.08014873822732,0,0,0,4.28933980974443,8.13932408087165,0.823240336780769,0.65147236858747,3.19852753868291,3.16780749173372,0.602878754119172,0,0.499864955910285,0,0,0,2.87549826589899,2.29723871668228,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,3.50119364741774,2.44138521329762,6.03115498439341,4.81758269752337,3.6271555457805,0.937131319941706,0,0,2.0694614258501,0,0,0.521301686808497,0,1.37257369524342,0,0,0,0.303127571446259,0,3.32629322662648,0.744323423456331,0.306923946576125,1.68396056659844,0.896974044789907,0,3.05622450172854,0,1.07946785661859,1.59805552781814,0.9033987161519,0.519254429183621,3.95115286763861,0,0,0,1.03333003348146,3.45973219212762,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.48335359146061,0.770243085573222,1.07452572308291,0.275673144969061,0.751941714077915,1.30515024522806,0.511359764496605,6.58837063785856,0,0,0,0,0.464845549297286,0.94443704049192,0,0.924100740528266,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,2.85945290885737,0.255897791311334,0.42793898803392,0.636406495851874,0,2.51821440616641,4.94166653524899,3.06312246098785,0,0,0.421258456238981,0.48763373908959,2.68084838594413,0,1.22849920267187,4.10075752665767,2.26016233240486,0,0,0.438450885253763,0,1.9676842561399,0,0,0.281695602532241,0.717056761020258,2.65272410735427,0,0,0.633322905892992,6.91519275215794,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.569710279235006,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0,3.21031058919516,0,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.627617077873999,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0.429226048136571,0,0.470284307407084,4.32359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0,2.72620834856675,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,2.33713309847224,1.10961172300523,0,1.25783950876288,0,0.457680136793847,2.57092570397506,0.777186002913902,0,0.477890301491107,0,1.24210365501008,0.414706207840855,0.53168342911599,0,6.16056196888596,1.14241563650639,0.406870733204662,0.363697318405119,0.751873899297419,0,1.99047944349308,0,0.686791410365586,1.01024846629776,0,0.192619830407303,0,0,0.680117776536817,0,0,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0.954013051960256,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0.397832444232549,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0.348724276104376,0.695433089210318,0.801711364730253,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0.07717415810794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| ||
|short_description=p@chr2:189859546..189859562,- | |short_description=p@chr2:189859546..189859562,- | ||
}} | }} |
Latest revision as of 04:15, 29 July 2015
Short description: | p@chr2:189859546..189859562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189859546..189859562, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 2.22e-08 | 28 |
fibrocyte | 4.02e-08 | 3 |
tendon cell | 4.02e-08 | 3 |
fibroblast | 6.62e-08 | 76 |
enteric smooth muscle cell | 2.04e-07 | 3 |
smooth muscle cell of large intestine | 2.04e-07 | 3 |
smooth muscle cell of colon | 2.04e-07 | 3 |
fat cell | 3.15e-07 | 15 |
hepatic stellate cell | 7.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.02e-08 | 3 |
tendon | 4.02e-08 | 3 |
regular connective tissue | 4.02e-08 | 3 |