FFCP PHASE1:Hg19::chr14:23395601..23395621,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23395601..23395621,-
|short_description=p3@PRMT5
|description=CAGE_peak_3_at_PRMT5_5end
|association_with_transcript=43bp_to_ENST00000556043_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10419 | |EntrezGene=10419 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10894 | |HGNC=10894 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5T6 | |UniProt=G3V5T6 | ||
|association_with_transcript=43bp_to_ENST00000556043_5end | |||
|cluster_id=chr14:23395601..23395621,- | |||
|description=CAGE_peak_3_at_PRMT5_5end | |||
|id=chr14:23395601..23395621,- | |||
|ontology_enrichment_celltype=CL:0000066!1.16e-23!254;CL:0002076!1.02e-16!43;CL:0002368!3.95e-12!13;CL:0000223!4.61e-11!59;CL:0002159!1.67e-08!13;CL:0000220!6.41e-08!246;CL:0002202!6.54e-08!9;CL:0002632!6.54e-08!9;CL:0002321!9.94e-08!248;CL:0000076!1.67e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002621;6.69e-12;3!CL:0002159;1.72e-11;14!CL:0002166;2.60e-11;3!CL:0002328;6.70e-11;3!CL:0002202;1.67e-09;9!CL:0002632;1.67e-09;9!CL:0002368;5.89e-09;13!CL:0002327;3.47e-08;4!CL:0000349;4.37e-08;19!CL:0000244;8.85e-08;4!CL:0000731;8.85e-08;4!CL:0000312;3.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.22e-21,253;CL:0002621,7.09e-12,3;CL:0002159,2.07e-11,14;CL:0002166,2.80e-11,3;CL:0002328,8.10e-11,3;CL:0002202,1.72e-09,9;CL:0002632,1.72e-09,9;CL:0002368,5.61e-09,13;CL:0002327,2.51e-08,4;CL:0000349,4.91e-08,19;CL:0000244,6.16e-08,4;CL:0000731,6.16e-08,4;CL:0002076,7.66e-08,42;CL:0000312,3.87e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.82e-08!14;DOID:305!8.01e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.10e-13!169;UBERON:0000925!1.10e-13!169;UBERON:0006595!1.10e-13!169;UBERON:0005911!3.01e-10!82;UBERON:0001004!6.66e-10!72;UBERON:0000065!1.62e-09!53;UBERON:0005631!1.92e-09!14;UBERON:0000158!1.92e-09!14;UBERON:0005910!2.78e-08!6;UBERON:0001007!5.97e-08!155;UBERON:0001555!5.97e-08!155;UBERON:0007026!5.97e-08!155;UBERON:0003100!1.31e-07!41;UBERON:0003124!1.34e-07!7;UBERON:0004923!1.68e-07!57;UBERON:0000365!2.54e-07!5;UBERON:0000344!2.76e-07!12;UBERON:0005153!4.23e-07!37;UBERON:0000072!5.31e-07!46;UBERON:0005178!6.21e-07!34;UBERON:0002224!6.21e-07!34;UBERON:0005157!7.41e-07!51;UBERON:0000064!8.13e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.69e-12;3!UBERON:0004807;1.61e-11;22!UBERON:0004815;6.70e-11;3!UBERON:0002031;6.70e-11;3!UBERON:0005911;1.11e-10;36!UBERON:0000486;7.76e-10;12!UBERON:0005631;1.33e-08;10!UBERON:0000158;1.33e-08;10!UBERON:0001708;1.40e-08;4!UBERON:0008895;1.40e-08;4!UBERON:0001911;3.47e-08;4!UBERON:0011159;6.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.09e-12,3;UBERON:0005631,2.81e-11,14;UBERON:0000158,2.81e-11,14;UBERON:0004815,8.10e-11,3;UBERON:0002031,8.10e-11,3;UBERON:0005911,5.02e-09,82;UBERON:0005153,6.64e-09,37;UBERON:0004807,1.29e-08,28;UBERON:0001708,1.47e-08,4;UBERON:0008895,1.47e-08,4;UBERON:0001911,2.51e-08,4;UBERON:0005333,2.51e-08,4;UBERON:0008425,2.51e-08,4;UBERON:0005311,2.51e-08,4;UBERON:0003124,4.91e-08,7;UBERON:0004119,7.04e-08,160;UBERON:0000925,7.04e-08,160;UBERON:0006595,7.04e-08,160;UBERON:0004871,2.49e-07,8;UBERON:0011159,6.44e-07,5 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.737201809504527,1.39560233594486,1.09220686065086,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,3.91567694411725,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46978180500154,4.36393792945335,6.30970109855808,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,2.41450627898976,4.49607013030478,16.0846355858609,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.35174979478403,3.1190521393325,2.4180801129769,1.74380363108377,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,6.36567900037145,0,1.20956117331872,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0.519254429183621,0.116210378459959,0,0.802025881213139,1.74953878978203,0.114814448164607,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,1.52925763827023,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,4.82051789532479,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.991709492165869,1.53752053892085,0.255225424989168,0.6069466851333,0,0,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79044126903985,0.670302275535787,5.44454924306613,0,1.29151611801369,1.68471475667626,0.443430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9372242368845,0,9.82914246717543,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.629078458031288,0.358042349351218,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0,0,0,3.82801391678303,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,4.33899345837827,1.27390116638691,1.30588809870604,0,0.171986032471617,0,0,0,3.006659511141,0.882561266915003,0,0,0,0,1.17330829640882,0.240476460754601,0,0,0,0,0,4.32164393964449,1.61528296235062,0.707082103850386,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,9.86080366330646,8.25235348473615,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,2.80019435264208,0,0,0,0.385239660814607,1.28664954824955,0,0,0,0.734210113519403,0,0.926404341482917,0,2.29695889729645,1.15748422962549,0,0,0,0,0,0.194860308839388,0,0,0,0,25.9913911731111,0,0,0,0.567515953566836,0,1.81843360035278,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0,0,0,0,0,1.31017534008077,3.10497781055795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,1.4460082245969,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.4582137370881,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0,0.672791175483681,0,0.202117188958219,0.653150243690884,8.55583252713203,2.02056159043763,0.143444410785353,0,0.325613074443898,0.426909383510862,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.737201809504527,1.39560233594486,1.09220686065086,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,3.91567694411725,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46978180500154,4.36393792945335,6.30970109855808,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,2.41450627898976,4.49607013030478,16.0846355858609,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.35174979478403,3.1190521393325,2.4180801129769,1.74380363108377,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,6.36567900037145,0,1.20956117331872,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0.519254429183621,0.116210378459959,0,0.802025881213139,1.74953878978203,0.114814448164607,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,1.52925763827023,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,4.82051789532479,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.991709492165869,1.53752053892085,0.255225424989168,0.6069466851333,0,0,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79044126903985,0.670302275535787,5.44454924306613,0,1.29151611801369,1.68471475667626,0.443430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9372242368845,0,9.82914246717543,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.629078458031288,0.358042349351218,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0,0,0,3.82801391678303,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,4.33899345837827,1.27390116638691,1.30588809870604,0,0.171986032471617,0,0,0,3.006659511141,0.882561266915003,0,0,0,0,1.17330829640882,0.240476460754601,0,0,0,0,0,4.32164393964449,1.61528296235062,0.707082103850386,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,9.86080366330646,8.25235348473615,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,2.80019435264208,0,0,0,0.385239660814607,1.28664954824955,0,0,0,0.734210113519403,0,0.926404341482917,0,2.29695889729645,1.15748422962549,0,0,0,0,0,0.194860308839388,0,0,0,0,25.9913911731111,0,0,0,0.567515953566836,0,1.81843360035278,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0,0,0,0,0,1.31017534008077,3.10497781055795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,1.4460082245969,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.4582137370881,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0,0.672791175483681,0,0.202117188958219,0.653150243690884,8.55583252713203,2.02056159043763,0.143444410785353,0,0.325613074443898,0.426909383510862,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p3@PRMT5 | |||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p3@PRMT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRMT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000556043_5end |
EntrezGene: | PRMT5 |
HGNC: | 10894 |
UniProt: | G3V5T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.22e-21 | 253 |
gingival epithelial cell | 7.09e-12 | 3 |
general ecto-epithelial cell | 2.07e-11 | 14 |
epithelial cell of Malassez | 2.80e-11 | 3 |
bronchial epithelial cell | 8.10e-11 | 3 |
epithelial cell of tracheobronchial tree | 1.72e-09 | 9 |
epithelial cell of lower respiratory tract | 1.72e-09 | 9 |
respiratory epithelial cell | 5.61e-09 | 13 |
mammary gland epithelial cell | 2.51e-08 | 4 |
extraembryonic cell | 4.91e-08 | 19 |
transitional epithelial cell | 6.16e-08 | 4 |
urothelial cell | 6.16e-08 | 4 |
endo-epithelial cell | 7.66e-08 | 42 |
keratinocyte | 3.87e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.09e-12 | 3 |
extraembryonic membrane | 2.81e-11 | 14 |
membranous layer | 2.81e-11 | 14 |
lower respiratory tract epithelium | 8.10e-11 | 3 |
epithelium of bronchus | 8.10e-11 | 3 |
endo-epithelium | 5.02e-09 | 82 |
epithelial bud | 6.64e-09 | 37 |
respiratory system epithelium | 1.29e-08 | 28 |
jaw skeleton | 1.47e-08 | 4 |
splanchnocranium | 1.47e-08 | 4 |
mammary gland | 2.51e-08 | 4 |
mammary bud | 2.51e-08 | 4 |
mammary ridge | 2.51e-08 | 4 |
mammary placode | 2.51e-08 | 4 |
chorion | 4.91e-08 | 7 |
endoderm-derived structure | 7.04e-08 | 160 |
endoderm | 7.04e-08 | 160 |
presumptive endoderm | 7.04e-08 | 160 |
somatic layer of lateral plate mesoderm | 2.49e-07 | 8 |
primary subdivision of cranial skeletal system | 6.44e-07 | 5 |