FFCP PHASE1:Hg19::chr8:22442505..22442531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22442505..22442531,+ | |||
|coexpression_cluster_id=C4743 | |||
|description=CAGE_peak_at_chr8:22442505..22442531,+ | |description=CAGE_peak_at_chr8:22442505..22442531,+ | ||
|id=chr8:22442505..22442531,+ | |id=chr8:22442505..22442531,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.14e-08!180;CL:0002334!1.98e-08!12;CL:0000057!1.41e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.14e-08!180;CL:0002334!1.98e-08!12;CL:0000057!1.41e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.37e-16;19!CL:0002559;1.29e-09;5!CL:0000153;6.65e-08;9!CL:0000447;6.65e-08;9!CL:0002577;1.57e-07;3!CL:0002541;3.78e-07;3!CL:0002334;7.02e-07;12!CL:0000346;9.72e-07;3!CL:1000428;9.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.43e-16,19;CL:0002559,1.18e-09,5;CL:0000153,7.19e-08,9;CL:0000447,7.19e-08,9;CL:0002577,1.56e-07,3;CL:0002541,3.72e-07,3;CL:0002334,5.80e-07,12;CL:0000346,9.48e-07,3;CL:1000428,9.48e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.61e-10!14;UBERON:0000158!4.61e-10!14;UBERON:0003124!5.74e-08!7;UBERON:0001737!4.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.28e-14;24!UBERON:0005631;6.98e-13;10!UBERON:0000158;6.98e-13;10!UBERON:0001737;2.57e-10;9!UBERON:0001557;2.57e-10;9!UBERON:0004457;2.90e-10;9!UBERON:0000042;2.90e-10;9!UBERON:0002073;1.29e-09;5!UBERON:0001987;5.05e-09;4!UBERON:0003688;4.19e-08;6!UBERON:0002358;4.19e-08;6!UBERON:0003684;4.19e-08;6!UBERON:0001178;4.19e-08;6!UBERON:0000305;9.64e-08;7!UBERON:0003124;3.78e-07;3!UBERON:0000920;3.78e-07;3!UBERON:0000412;9.72e-07;3!UBERON:0001992;9.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.20e-20,14;UBERON:0000158,5.20e-20,14;UBERON:0003124,1.58e-14,7;UBERON:0000478,4.30e-14,24;UBERON:0001737,1.78e-10,9;UBERON:0004923,4.22e-10,66;UBERON:0002073,1.18e-09,5;UBERON:0005086,1.18e-09,5;UBERON:0004457,2.14e-09,12;UBERON:0000042,2.14e-09,12;UBERON:0001987,4.88e-09,4;UBERON:0004340,4.88e-09,4;UBERON:0003688,4.51e-08,6;UBERON:0002358,4.51e-08,6;UBERON:0003684,4.51e-08,6;UBERON:0001178,4.51e-08,6;UBERON:0000305,9.75e-08,7;UBERON:0000920,3.72e-07,3;UBERON:0000412,9.48e-07,3;UBERON:0001992,9.48e-07,3 | |||
|phase1_expression=2.54349730978779,1.49870366723688,5.21531295155093,0,6.25745532198203,7.85104671690332,0,0,0,0,1.39560233594486,16.1646615376327,8.70431028153897,0.990130823680373,6.2965501388304,0,0,0,0,0.123121058076788,1.83600622119828,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,10.843174571537,11.5307719446255,6.22840031531542,0,4.37971383272372,0.189069634328136,0,0.351339142772504,0.72038491523742,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,0.886413581652058,0.132409180813219,0,0,1.12135520028461,0,0.49333509683432,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,2.75839016219118,0.150238058906597,0,0.179389635688862,1.49490172172997,1.05965950579781,0.900273288253207,0.206105058476878,1.28820270022815,1.11670113798954,0.675105328965065,0.68205903612839,1.26216887122057,0.920498986422993,1.61646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,6.25798129319264,6.43240938192885,5.52539685409922,1.39310378409594,5.77503585335668,1.8929088006375,0.505754070234305,1.20505514941741,1.54411561825352,1.30727666455444,2.37270619111097,1.48314438976181,1.17732879075208,1.53898862778556,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0.939269553886573,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0.358234090811393,0.581267877027924,4.21720947081732,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0.502257091432126,0,5.03212196532324,5.7430967917057,0,0.579125226670317,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.49076596687656,0.500170521059677,0,8.31883446123229,22.3036235996452,8.51593041183247,14.4083940441037,1.80567659836631,0,3.10419213877515,0.664225598535437,0.921845842708516,0,0.391602314925481,0,0,0,0,56.3817282890043,49.9306318531491,34.1701031462539,8.93188108147597,1.99500565274481,2.24528075546459,6.40695746278505,3.07024349440022,4.66476371316462,10.3892646511494,0.462629081407967,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0.241718899183244,0.200506470303285,0,0,0,0,0.902399225814824,0.231046011313244,3.92174884588428,4.38417673959782,0.105551628892876,0,0,0.863663664408557,0,2.98041081298238,4.51520796469368,0.764628819135115,4.98645605357235,4.47749509444357,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0.10115778085555,1.39453664789186,0,0,0,1.06461206063404,0,0,0.572499546967965,0,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,1.27281299170375,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,2.19225442626881,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,17.9441490003015,20.086988470554,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.1090734359319,49.8900663798833,20.5797670406485,0,0,0,0,0,1.19548792950642,0,0,0.409074730008619,0,4.66559381492711,0,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0,0,1.5255219017566,1.41832609060762,0.344743373241465,0,0,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,1.74301541630384,0,0.230850775511391,0,3.91958637459702,0.448788222048861,0.54323685961004,22.3300811812344,15.0220053179054,6.39641731222362,0,0.470940769185074,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0.173559738335131,0,0.783532859223623,0.34945333648406,0.343972064943233,5.99889253992328,5.48169878146392,5.50173562256502,0,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,1.08723364858891,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.709251365692784,0.891727998294968,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,2.21504428321048,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0.895528817321244,0.934853239388898,0,0.757612021100357,0,4.44905610798268,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0.214821114084977,0,1.19428766609585,0.800055529326307,0,0.673498977531838,3.78554694685953,0,3.64550705337374,0,0.226705925512272,0.694567422971502,0,0.358177682162975,0.926404341482917,0.219284049578707,0,0.771656153083659,0,0,12.4354923023231,0,0,0,0,0,0.655219697692825,9.83091635014877,0,0,0,0,1.13503190713367,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,2.0170506870352,0,0,0.327543835020193,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,3.81420191699347,0,0,0.135939465953663,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0.828864656652147,0.6828739083758,0,0,0,0,0,6.8732060563215,0,0,0.671132590786754,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,3.22861517906852,2.34959794949634,0.580120991762195,0,0,1.05868461514708,0,0,0,0.286679166302903,0,0,0,0.5290268405154,1.85997509083376,14.327444487574,1.29787968637137,0,0,0,47.0168505110536,2.6721740526556,40.7094404939363,0,0,0,0,0,0.639701945702943,0,0,0,4.1488789154827,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=2.54349730978779,1.49870366723688,5.21531295155093,0,6.25745532198203,7.85104671690332,0,0,0,0,1.39560233594486,16.1646615376327,8.70431028153897,0.990130823680373,6.2965501388304,0,0,0,0,0.123121058076788,1.83600622119828,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,10.843174571537,11.5307719446255,6.22840031531542,0,4.37971383272372,0.189069634328136,0,0.351339142772504,0.72038491523742,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,0.886413581652058,0.132409180813219,0,0,1.12135520028461,0,0.49333509683432,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,2.75839016219118,0.150238058906597,0,0.179389635688862,1.49490172172997,1.05965950579781,0.900273288253207,0.206105058476878,1.28820270022815,1.11670113798954,0.675105328965065,0.68205903612839,1.26216887122057,0.920498986422993,1.61646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,6.25798129319264,6.43240938192885,5.52539685409922,1.39310378409594,5.77503585335668,1.8929088006375,0.505754070234305,1.20505514941741,1.54411561825352,1.30727666455444,2.37270619111097,1.48314438976181,1.17732879075208,1.53898862778556,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0.939269553886573,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0.358234090811393,0.581267877027924,4.21720947081732,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0.502257091432126,0,5.03212196532324,5.7430967917057,0,0.579125226670317,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.49076596687656,0.500170521059677,0,8.31883446123229,22.3036235996452,8.51593041183247,14.4083940441037,1.80567659836631,0,3.10419213877515,0.664225598535437,0.921845842708516,0,0.391602314925481,0,0,0,0,56.3817282890043,49.9306318531491,34.1701031462539,8.93188108147597,1.99500565274481,2.24528075546459,6.40695746278505,3.07024349440022,4.66476371316462,10.3892646511494,0.462629081407967,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0.241718899183244,0.200506470303285,0,0,0,0,0.902399225814824,0.231046011313244,3.92174884588428,4.38417673959782,0.105551628892876,0,0,0.863663664408557,0,2.98041081298238,4.51520796469368,0.764628819135115,4.98645605357235,4.47749509444357,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0.10115778085555,1.39453664789186,0,0,0,1.06461206063404,0,0,0.572499546967965,0,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,1.27281299170375,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,2.19225442626881,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,17.9441490003015,20.086988470554,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.1090734359319,49.8900663798833,20.5797670406485,0,0,0,0,0,1.19548792950642,0,0,0.409074730008619,0,4.66559381492711,0,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0,0,1.5255219017566,1.41832609060762,0.344743373241465,0,0,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,1.74301541630384,0,0.230850775511391,0,3.91958637459702,0.448788222048861,0.54323685961004,22.3300811812344,15.0220053179054,6.39641731222362,0,0.470940769185074,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0.173559738335131,0,0.783532859223623,0.34945333648406,0.343972064943233,5.99889253992328,5.48169878146392,5.50173562256502,0,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,1.08723364858891,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.709251365692784,0.891727998294968,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,2.21504428321048,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0.895528817321244,0.934853239388898,0,0.757612021100357,0,4.44905610798268,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0.214821114084977,0,1.19428766609585,0.800055529326307,0,0.673498977531838,3.78554694685953,0,3.64550705337374,0,0.226705925512272,0.694567422971502,0,0.358177682162975,0.926404341482917,0.219284049578707,0,0.771656153083659,0,0,12.4354923023231,0,0,0,0,0,0.655219697692825,9.83091635014877,0,0,0,0,1.13503190713367,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,2.0170506870352,0,0,0.327543835020193,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,3.81420191699347,0,0,0.135939465953663,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0.828864656652147,0.6828739083758,0,0,0,0,0,6.8732060563215,0,0,0.671132590786754,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,3.22861517906852,2.34959794949634,0.580120991762195,0,0,1.05868461514708,0,0,0,0.286679166302903,0,0,0,0.5290268405154,1.85997509083376,14.327444487574,1.29787968637137,0,0,0,47.0168505110536,2.6721740526556,40.7094404939363,0,0,0,0,0,0.639701945702943,0,0,0,4.1488789154827,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr8:22442505..22442531,+ | |short_description=p@chr8:22442505..22442531,+ | ||
}} | }} |
Latest revision as of 16:59, 31 July 2015
Short description: | p@chr8:22442505..22442531, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22442505..22442531, + |
Coexpression cluster: | C4743_Placental_amniotic_testicular_chorionic_Olfactory_Synoviocyte_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.43e-16 | 19 |
hair follicle cell | 1.18e-09 | 5 |
GAG secreting cell | 7.19e-08 | 9 |
carbohydrate secreting cell | 7.19e-08 | 9 |
placental epithelial cell | 1.56e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.72e-07 | 3 |
preadipocyte | 5.80e-07 | 12 |
hair follicle dermal papilla cell | 9.48e-07 | 3 |
stem cell of epidermis | 9.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.20e-20 | 14 |
membranous layer | 5.20e-20 | 14 |
chorion | 1.58e-14 | 7 |
extraembryonic structure | 4.30e-14 | 24 |
larynx | 1.78e-10 | 9 |
organ component layer | 4.22e-10 | 66 |
hair follicle | 1.18e-09 | 5 |
hair follicle placode | 1.18e-09 | 5 |
cavity lining | 2.14e-09 | 12 |
serous membrane | 2.14e-09 | 12 |
placenta | 4.88e-09 | 4 |
allantois | 4.88e-09 | 4 |
omentum | 4.51e-08 | 6 |
peritoneum | 4.51e-08 | 6 |
abdominal cavity | 4.51e-08 | 6 |
visceral peritoneum | 4.51e-08 | 6 |
amnion | 9.75e-08 | 7 |
egg chorion | 3.72e-07 | 3 |
dermal papilla | 9.48e-07 | 3 |
papillary layer of dermis | 9.48e-07 | 3 |