FFCP PHASE1:Hg19::chr14:22963623..22963634,+: Difference between revisions
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|id=chr14:22963623..22963634,+
|short_description=p3@uc010ajw.1
|description=CAGE_peak_3_at_uc010ajw.1_5end
|association_with_transcript=86bp_to_uc010ajw.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_uc010ajw.1_5end | |||
|cluster_id=chr14:22963623..22963634,+ | |||
|description=CAGE_peak_3_at_uc010ajw.1_5end | |||
|id=chr14:22963623..22963634,+ | |||
|ontology_enrichment_celltype=CL:0000815!5.95e-13!2;CL:0000792!5.95e-13!2;CL:0002677!5.95e-13!2;CL:0000838!5.48e-12!52;CL:0000542!1.01e-11!53;CL:0000051!1.01e-11!53;CL:0000898!6.33e-09!3;CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24;CL:0002127!1.27e-07!1;CL:0000914!1.27e-07!1;CL:0000911!1.27e-07!1;CL:0000814!1.27e-07!1;CL:0002042!1.27e-07!1;CL:0002039!1.27e-07!1;CL:0002040!1.27e-07!1;CL:0002041!1.27e-07!1;CL:0000946!5.19e-07!1;CL:0000786!5.19e-07!1;CL:0000980!5.19e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.48e-40;1!CL:0000911;1.48e-40;1!CL:0000814;1.48e-40;1!CL:0000945;1.18e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.30e-40,1;CL:0000914,3.30e-40,1;CL:0000911,3.30e-40,1;CL:0000814,3.30e-40,1;CL:0002042,3.30e-40,1;CL:0002039,3.30e-40,1;CL:0002040,3.30e-40,1;CL:0002041,3.30e-40,1;CL:0000893,6.96e-21,2;CL:0002489,6.96e-21,2;CL:0000809,6.96e-21,2;CL:0000808,6.96e-21,2;CL:0000894,6.96e-21,2;CL:0000806,6.96e-21,2;CL:0000807,6.96e-21,2;CL:0000805,6.96e-21,2;CL:0002425,6.96e-21,2;CL:0000945,1.13e-15,24;CL:0000826,1.13e-15,24;CL:0000838,7.48e-13,52;CL:0000542,1.27e-12,53;CL:0000051,1.27e-12,53 | |||
|ontology_enrichment_development_v019=CL:0002425;4.66e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.70e-14!7;UBERON:0002106!8.69e-09!3;UBERON:0004854!8.69e-09!3;UBERON:0009034!8.69e-09!3;UBERON:0002095!8.69e-09!3;UBERON:0004782!8.69e-09!3;UBERON:0003281!8.69e-09!3;UBERON:0009664!8.69e-09!3;UBERON:0002296!8.69e-09!3;UBERON:0005602!8.69e-09!3;UBERON:0001179!8.69e-09!3;UBERON:0006293!8.69e-09!3;UBERON:0001154!3.41e-07!1;UBERON:0001153!3.41e-07!1;UBERON:0002370!6.40e-07!4;UBERON:0005058!6.40e-07!4;UBERON:0009113!6.40e-07!4;UBERON:0003295!6.40e-07!4;UBERON:0005562!6.40e-07!4;UBERON:0002372!6.97e-07!1;UBERON:0001961!6.97e-07!1;UBERON:0001744!6.97e-07!1;UBERON:0001735!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.79e-11,4;UBERON:0005058,3.79e-11,4;UBERON:0009113,3.79e-11,4;UBERON:0003295,3.79e-11,4;UBERON:0005562,3.79e-11,4;UBERON:0003351,7.25e-08,6;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7 | |||
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|short_description=p3@uc010ajw.1 | |||
}} | }} |
Latest revision as of 19:14, 24 July 2015
Short description: | p3@uc010ajw.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc010ajw.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_uc010ajw.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.30e-40 | 1 |
immature NK T cell | 3.30e-40 | 1 |
effector T cell | 3.30e-40 | 1 |
mature NK T cell | 3.30e-40 | 1 |
immature NK T cell stage IV | 3.30e-40 | 1 |
immature NK T cell stage I | 3.30e-40 | 1 |
immature NK T cell stage II | 3.30e-40 | 1 |
immature NK T cell stage III | 3.30e-40 | 1 |
thymocyte | 6.96e-21 | 2 |
double negative thymocyte | 6.96e-21 | 2 |
double-positive, alpha-beta thymocyte | 6.96e-21 | 2 |
DN4 thymocyte | 6.96e-21 | 2 |
DN1 thymic pro-T cell | 6.96e-21 | 2 |
DN2 thymocyte | 6.96e-21 | 2 |
DN3 thymocyte | 6.96e-21 | 2 |
immature single positive thymocyte | 6.96e-21 | 2 |
early T lineage precursor | 6.96e-21 | 2 |
lymphocyte of B lineage | 1.13e-15 | 24 |
pro-B cell | 1.13e-15 | 24 |
lymphoid lineage restricted progenitor cell | 7.48e-13 | 52 |
lymphocyte | 1.27e-12 | 53 |
common lymphoid progenitor | 1.27e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.79e-11 | 4 |
hemolymphoid system gland | 3.79e-11 | 4 |
thymic region | 3.79e-11 | 4 |
pharyngeal gland | 3.79e-11 | 4 |
thymus primordium | 3.79e-11 | 4 |
pharyngeal epithelium | 7.25e-08 | 6 |
hemopoietic organ | 6.39e-07 | 7 |
immune organ | 6.39e-07 | 7 |