FFCP PHASE1:Hg19::chr8:12809300..12809317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_ENST00000528753_5end | |association_with_transcript=149bp_to_ENST00000528753_5end | ||
|cluster_id=chr8:12809300..12809317,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_5_at_KIAA1456_5end | |description=CAGE_peak_5_at_KIAA1456_5end | ||
|id=chr8:12809300..12809317,+ | |id=chr8:12809300..12809317,+ | ||
|ontology_enrichment_celltype=CL:0002620!5.28e-08!23 | |ontology_enrichment_celltype=CL:0002620!5.28e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.94e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.74e-13,23 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.59e-08;1!UBERON:0010227;7.59e-08;1 | |||
|ontology_enrichment_disease=DOID:171!2.30e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.66e-25;10!DOID:3095;5.01e-11;22!DOID:2994;5.01e-11;22!DOID:3119;7.12e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.82e-25,10;DOID:3095,5.06e-11,22;DOID:2994,5.06e-11,22;DOID:3119,7.88e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.54e-13!94;UBERON:0001016!3.54e-13!94;UBERON:0001017!1.86e-12!82;UBERON:0005743!2.07e-12!86;UBERON:0001049!1.36e-11!57;UBERON:0005068!1.36e-11!57;UBERON:0006241!1.36e-11!57;UBERON:0007135!1.36e-11!57;UBERON:0007023!2.34e-11!115;UBERON:0002346!2.50e-11!90;UBERON:0000924!1.74e-09!173;UBERON:0006601!1.74e-09!173;UBERON:0002616!5.63e-09!59;UBERON:0000955!5.79e-09!69;UBERON:0006238!5.79e-09!69;UBERON:0001869!1.63e-08!32;UBERON:0003075!2.24e-08!86;UBERON:0007284!2.24e-08!86;UBERON:0002780!5.45e-08!41;UBERON:0001890!5.45e-08!41;UBERON:0006240!5.45e-08!41;UBERON:0001893!8.62e-08!34;UBERON:0003080!1.08e-07!42;UBERON:0004121!2.43e-07!169;UBERON:0002791!4.41e-07!33;UBERON:0002020!8.97e-07!34;UBERON:0003528!8.97e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.07e-28;4!UBERON:0000923;2.07e-28;4!UBERON:0010316;2.07e-28;4!UBERON:0005291;2.07e-28;4!UBERON:0002050;8.86e-23;5!UBERON:0005423;8.86e-23;5!UBERON:0001905;7.39e-15;2!UBERON:0002757;7.39e-15;2!UBERON:0010134;7.39e-15;2!UBERON:0005408;7.39e-15;2!UBERON:0001899;7.39e-15;2!UBERON:0003296;7.35e-08;4!UBERON:0010133;7.35e-08;4!UBERON:0002784;7.35e-08;4!UBERON:0002079;7.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.40e-15,2;UBERON:0002757,7.40e-15,2;UBERON:0010134,7.40e-15,2;UBERON:0005408,7.40e-15,2;UBERON:0001899,7.40e-15,2;UBERON:0002097,3.78e-09,41;UBERON:0002199,4.92e-08,46;UBERON:0002416,4.92e-08,46;UBERON:0002079,6.63e-08,1;UBERON:0003296,7.36e-08,4;UBERON:0010133,7.36e-08,4;UBERON:0002784,7.36e-08,4 | |||
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| ||
|short_description=p5@KIAA1456 | |short_description=p5@KIAA1456 | ||
}} | }} |
Latest revision as of 04:58, 16 September 2015
Short description: | p5@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KIAA1456_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 149bp_to_ENST00000528753_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.74e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.40e-15 | 2 |
regional part of epithalamus | 7.40e-15 | 2 |
secretory circumventricular organ | 7.40e-15 | 2 |
circumventricular organ | 7.40e-15 | 2 |
epithalamus | 7.40e-15 | 2 |
skin of body | 3.78e-09 | 41 |
integument | 4.92e-08 | 46 |
integumental system | 4.92e-08 | 46 |
left cardiac atrium | 6.63e-08 | 1 |
gland of diencephalon | 7.36e-08 | 4 |
neuroendocrine gland | 7.36e-08 | 4 |
regional part of diencephalon | 7.36e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.82e-25 | 10 |
germ cell and embryonal cancer | 5.06e-11 | 22 |
germ cell cancer | 5.06e-11 | 22 |
gastrointestinal system cancer | 7.88e-08 | 14 |