FFCP PHASE1:Hg19::chr2:12246664..12246694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000449986_5end | |association_with_transcript=-15bp_to_ENST00000449986_5end | ||
|cluster_id=chr2:12246664..12246694,+ | |||
|description=CAGE_peak_1_at_ENST00000449986_5end | |description=CAGE_peak_1_at_ENST00000449986_5end | ||
|id=chr2:12246664..12246694,+ | |id=chr2:12246664..12246694,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.00e-16!180;CL:0002556!3.84e-10!6;CL:0002371!1.98e-09!591;CL:0000144!3.54e-08!625;CL:0000057!5.21e-08!75;CL:0000012!5.63e-08!682;CL:0000062!6.46e-08!11;CL:0000375!6.46e-08!11;CL:0000335!6.46e-08!11;CL:0000548!1.32e-07!679;CL:0000004!1.32e-07!679;CL:0000255!1.32e-07!679;CL:0000035!8.23e-07!20 | |ontology_enrichment_celltype=CL:0000055!2.00e-16!180;CL:0002556!3.84e-10!6;CL:0002371!1.98e-09!591;CL:0000144!3.54e-08!625;CL:0000057!5.21e-08!75;CL:0000012!5.63e-08!682;CL:0000062!6.46e-08!11;CL:0000375!6.46e-08!11;CL:0000335!6.46e-08!11;CL:0000548!1.32e-07!679;CL:0000004!1.32e-07!679;CL:0000255!1.32e-07!679;CL:0000035!8.23e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002564;3.90e-19;3!CL:0002556;1.12e-15;6!CL:0002602;2.63e-13;2!CL:0002367;2.19e-12;2!CL:0002552;2.37e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,4.68e-19,3;CL:0002556,1.02e-15,6;CL:0002602,2.40e-13,2;CL:0002367,1.29e-12,2;CL:0002552,2.06e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;9.90e-08;1!DOID:3347;1.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.91e-08,1;DOID:3347,1.74e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001758!3.84e-10!6;UBERON:0003672!3.84e-10!6;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0002200!6.08e-08!11;UBERON:0006876!6.08e-08!11;UBERON:0000075!2.05e-07!13;UBERON:0005944!2.05e-07!13;UBERON:0004288!2.05e-07!13;UBERON:0003089!2.05e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.19e-30;5!UBERON:0002216;1.19e-30;5!UBERON:0011134;1.19e-30;5!UBERON:0002209;1.19e-30;5!UBERON:0002213;1.19e-30;5!UBERON:0007844;1.19e-30;5!UBERON:0011138;1.19e-30;5!UBERON:0001130;1.19e-30;5!UBERON:0001066;1.19e-30;5!UBERON:0001468;1.19e-30;5!UBERON:0000075;8.54e-29;16!UBERON:0002242;3.90e-19;3!UBERON:0004905;4.22e-19;8!UBERON:0000982;4.22e-19;8!UBERON:0004770;4.22e-19;8!UBERON:0001434;3.77e-18;36!UBERON:0001758;1.12e-15;6!UBERON:0003672;1.12e-15;6!UBERON:0004765;6.06e-14;26!UBERON:0003129;1.83e-13;7!UBERON:0006444;2.63e-13;2!UBERON:0001995;2.63e-13;2!UBERON:0004715;2.63e-13;2!UBERON:0005969;2.19e-12;2!UBERON:0003956;2.19e-12;2!UBERON:0000165;2.01e-09;28!UBERON:0002418;3.69e-09;3!UBERON:0004755;3.69e-09;3!UBERON:0011137;1.28e-08;11!UBERON:0010323;1.28e-08;11!UBERON:0001444;5.27e-08;48!UBERON:0007811;2.37e-07;52!UBERON:0001828;2.91e-07;8!UBERON:0000033;3.37e-07;50!UBERON:0000153;7.28e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.31e-30,5;UBERON:0002216,1.31e-30,5;UBERON:0011134,1.31e-30,5;UBERON:0002209,1.31e-30,5;UBERON:0002213,1.31e-30,5;UBERON:0005856,1.31e-30,5;UBERON:0005866,1.31e-30,5;UBERON:0005863,1.31e-30,5;UBERON:0007844,1.31e-30,5;UBERON:0011138,1.31e-30,5;UBERON:0001130,1.31e-30,5;UBERON:0001066,1.31e-30,5;UBERON:0001468,1.31e-30,5;UBERON:0000075,8.29e-29,16;UBERON:0011137,5.79e-20,14;UBERON:0004905,4.47e-19,8;UBERON:0000982,4.47e-19,8;UBERON:0004770,4.47e-19,8;UBERON:0002242,4.68e-19,3;UBERON:0003068,4.68e-19,3;UBERON:0002328,4.68e-19,3;UBERON:0004880,4.68e-19,3;UBERON:0001758,1.02e-15,6;UBERON:0003672,1.02e-15,6;UBERON:0003129,1.69e-13,7;UBERON:0006444,2.40e-13,2;UBERON:0001995,2.40e-13,2;UBERON:0004715,2.40e-13,2;UBERON:0005969,1.29e-12,2;UBERON:0003956,1.29e-12,2;UBERON:0001444,3.83e-10,49;UBERON:0002418,3.47e-09,3;UBERON:0004755,3.47e-09,3;UBERON:0000165,4.18e-09,29;UBERON:0000930,4.18e-09,29;UBERON:0001434,9.85e-09,100;UBERON:0000033,1.16e-08,56;UBERON:0010323,1.22e-08,11;UBERON:0000153,1.16e-07,62;UBERON:0007811,1.16e-07,62;UBERON:0001828,2.67e-07,8 | |||
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|short_description=p1@ENST00000449986 | |short_description=p1@ENST00000449986 | ||
}} | }} |
Latest revision as of 00:00, 29 July 2015
Short description: | p1@ENST00000449986 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449986_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000449986_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 4.68e-19 | 3 |
fibroblast of periodontium | 1.02e-15 | 6 |
annulus pulposus cell | 2.40e-13 | 2 |
trabecular meshwork cell | 1.29e-12 | 2 |
fibroblast of gingiva | 2.06e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.91e-08 | 1 |
osteosarcoma | 1.74e-07 | 1 |