FFCP PHASE1:Hg19::chr13:49549473..49549480,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:49549473..49549480,+
|short_description=p@chr13:49549473..49549480,+
|description=CAGE_peak_at_chr13:49549473..49549480,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:49549473..49549480,+ | |||
|description=CAGE_peak_at_chr13:49549473..49549480,+ | |||
|id=chr13:49549473..49549480,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.51e-18!18;CL:0000789!2.51e-18!18;CL:0002420!2.51e-18!18;CL:0002419!2.51e-18!18;CL:0000790!2.51e-18!18;CL:0000084!1.97e-14!25;CL:0000827!1.97e-14!25;CL:0000625!7.38e-14!11;CL:0000838!3.36e-12!52;CL:0000542!7.08e-12!53;CL:0000051!7.08e-12!53;CL:0002087!1.83e-09!119;CL:0000738!2.57e-09!140;CL:0002031!7.67e-09!124;CL:0000037!7.80e-09!172;CL:0000566!7.80e-09!172;CL:0000623!5.18e-08!3;CL:0000825!5.18e-08!3;CL:0000988!6.97e-08!182;CL:0000624!2.32e-07!6;CL:0002032!9.44e-07!165;CL:0000837!9.44e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.48e-40;1!CL:0002625;1.48e-40;1!CL:0000216;1.48e-40;1!CL:0000625;2.02e-15;11!CL:0000791;7.75e-10;18!CL:0000789;7.75e-10;18!CL:0002419;7.75e-10;18!CL:0000154;6.33e-08;6!CL:0000084;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.91e-41,1;CL:0002625,9.91e-41,1;CL:0000216,9.91e-41,1;CL:0000625,1.74e-15,11;CL:0000791,7.10e-10,18;CL:0000789,7.10e-10,18;CL:0002420,7.10e-10,18;CL:0002419,7.10e-10,18;CL:0000790,7.10e-10,18;CL:0000154,5.92e-08,6;CL:0000084,2.20e-07,25;CL:0000827,2.20e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.75e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0001136;1.48e-40;1!UBERON:0001343;1.48e-40;1!UBERON:0004910;1.48e-40;1!UBERON:0004813;1.48e-40;1!UBERON:0004177;1.69e-32;5!UBERON:0005057;1.69e-32;5!UBERON:0004909;4.66e-21;2!UBERON:0005904;3.10e-11;4!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.91e-41,1;UBERON:0001343,9.91e-41,1;UBERON:0004910,9.91e-41,1;UBERON:0005154,9.91e-41,1;UBERON:0005295,9.91e-41,1;UBERON:0004813,9.91e-41,1;UBERON:0005297,9.91e-41,1;UBERON:0005294,9.91e-41,1;UBERON:0010141,9.91e-41,1;UBERON:0005891,9.91e-41,1;UBERON:0002370,4.94e-40,4;UBERON:0005058,4.94e-40,4;UBERON:0009113,4.94e-40,4;UBERON:0003295,4.94e-40,4;UBERON:0005562,4.94e-40,4;UBERON:0003351,4.06e-27,6;UBERON:0004177,2.02e-23,7;UBERON:0005057,2.02e-23,7;UBERON:0004909,3.81e-21,2;UBERON:0000974,9.54e-17,10;UBERON:0003408,9.54e-17,10;UBERON:0001042,9.54e-17,10;UBERON:0009145,9.54e-17,10;UBERON:0006562,2.51e-15,11;UBERON:0009722,2.51e-15,11;UBERON:0007690,2.51e-15,11;UBERON:0005904,2.80e-11,4;UBERON:0008814,8.86e-10,18;UBERON:0001557,2.56e-09,19 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.637130828648193,1.30216690771284,0,0.150575119077773,0.383959833463255,0,0.236777252044017,1.64225599384209,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0.212574920101683,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0,0,1.0334225573761,1.24149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:49549473..49549480,+ | |||
}} | }} |
Latest revision as of 16:34, 24 July 2015
Short description: | p@chr13:49549473..49549480, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49549473..49549480, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.91e-41 | 1 |
seminiferous tubule epithelial cell | 9.91e-41 | 1 |
Sertoli cell | 9.91e-41 | 1 |
CD8-positive, alpha-beta T cell | 1.74e-15 | 11 |
mature alpha-beta T cell | 7.10e-10 | 18 |
alpha-beta T cell | 7.10e-10 | 18 |
immature T cell | 7.10e-10 | 18 |
mature T cell | 7.10e-10 | 18 |
immature alpha-beta T cell | 7.10e-10 | 18 |
protein secreting cell | 5.92e-08 | 6 |
T cell | 2.20e-07 | 25 |
pro-T cell | 2.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.91e-41 | 1 |
seminiferous tubule of testis | 9.91e-41 | 1 |
epithelium of male gonad | 9.91e-41 | 1 |
epithelial cord | 9.91e-41 | 1 |
sex cord | 9.91e-41 | 1 |
seminiferous tubule epithelium | 9.91e-41 | 1 |
testis sex cord | 9.91e-41 | 1 |
genital ridge | 9.91e-41 | 1 |
primitive sex cord of indifferent gonad | 9.91e-41 | 1 |
coelomic epithelium | 9.91e-41 | 1 |
thymus | 4.94e-40 | 4 |
hemolymphoid system gland | 4.94e-40 | 4 |
thymic region | 4.94e-40 | 4 |
pharyngeal gland | 4.94e-40 | 4 |
thymus primordium | 4.94e-40 | 4 |
pharyngeal epithelium | 4.06e-27 | 6 |
hemopoietic organ | 2.02e-23 | 7 |
immune organ | 2.02e-23 | 7 |
epithelium of gonad | 3.81e-21 | 2 |
neck | 9.54e-17 | 10 |
gland of gut | 9.54e-17 | 10 |
chordate pharynx | 9.54e-17 | 10 |
pharyngeal region of foregut | 9.54e-17 | 10 |
pharynx | 2.51e-15 | 11 |
entire pharyngeal arch endoderm | 2.51e-15 | 11 |
early pharyngeal endoderm | 2.51e-15 | 11 |
duct of male reproductive system | 2.80e-11 | 4 |
pharyngeal arch system | 8.86e-10 | 18 |
upper respiratory tract | 2.56e-09 | 19 |