FFCP PHASE1:Hg19::chr7:116139744..116139818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=858 | |EntrezGene=858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |HGNC=1528 | ||
|TSSclassifier=strong | |||
|UniProt=P51636 | |UniProt=P51636 | ||
|association_with_transcript=0bp_to_ENST00000343213_5end | |association_with_transcript=0bp_to_ENST00000343213_5end | ||
|cluster_id=chr7:116139744..116139818,+ | |||
|coexpression_cluster_id=C2874 | |||
|description=CAGE_peak_1_at_CAV2_5end | |description=CAGE_peak_1_at_CAV2_5end | ||
|id=chr7:116139744..116139818,+ | |id=chr7:116139744..116139818,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.13e-20!254;CL:0000220!4.27e-18!246;CL:0002321!1.72e-17!248;CL:0000076!2.14e-15!62;CL:0000222!2.82e-12!119;CL:0002139!1.94e-11!24;CL:0000213!1.39e-10!57;CL:0000215!1.39e-10!57;CL:0002076!3.78e-09!43;CL:0000115!4.81e-09!35;CL:0000057!3.27e-08!75;CL:0000071!3.82e-08!18;CL:0002546!3.82e-08!18;CL:0002078!5.04e-08!44;CL:0000136!2.53e-07!15;CL:0000223!5.39e-07!59;CL:0000055!7.37e-07!180 | |ontology_enrichment_celltype=CL:0000066!6.13e-20!254;CL:0000220!4.27e-18!246;CL:0002321!1.72e-17!248;CL:0000076!2.14e-15!62;CL:0000222!2.82e-12!119;CL:0002139!1.94e-11!24;CL:0000213!1.39e-10!57;CL:0000215!1.39e-10!57;CL:0002076!3.78e-09!43;CL:0000115!4.81e-09!35;CL:0000057!3.27e-08!75;CL:0000071!3.82e-08!18;CL:0002546!3.82e-08!18;CL:0002078!5.04e-08!44;CL:0000136!2.53e-07!15;CL:0000223!5.39e-07!59;CL:0000055!7.37e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.66e-11;24!CL:0000071;3.40e-08;18!CL:0000115;3.59e-08;36!CL:0000076;6.95e-08;63!CL:0000136;2.46e-07;13!CL:0000213;4.02e-07;58!CL:0000215;4.02e-07;58!CL:0002076;4.55e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.36e-20,253;CL:0002321,4.33e-18,250;CL:0000076,1.06e-15,63;CL:0000222,5.80e-13,121;CL:0002139,1.70e-11,24;CL:0000213,3.62e-11,58;CL:0000215,3.62e-11,58;CL:0000115,1.26e-09,36;CL:0002076,6.14e-09,42;CL:0002078,1.41e-08,45;CL:0000057,1.96e-08,76;CL:0000071,3.50e-08,18;CL:0002546,3.50e-08,18;CL:0000136,2.34e-07,15;CL:0000223,7.77e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.40e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.01e-14!659;UBERON:0002100!2.31e-12!216;UBERON:0003102!2.76e-12!95;UBERON:0000055!5.41e-12!69;UBERON:0000467!8.43e-12!625;UBERON:0000475!9.19e-12!365;UBERON:0000480!9.99e-12!626;UBERON:0002049!1.08e-11!79;UBERON:0007798!1.08e-11!79;UBERON:0000119!1.14e-11!312;UBERON:0000483!2.40e-11!309;UBERON:0004872!8.54e-11!84;UBERON:0003914!1.14e-10!118;UBERON:0004923!1.41e-10!57;UBERON:0003104!2.14e-10!238;UBERON:0009142!2.14e-10!238;UBERON:0000477!4.62e-10!286;UBERON:0000490!6.95e-10!138;UBERON:0004119!8.08e-10!169;UBERON:0000925!8.08e-10!169;UBERON:0006595!8.08e-10!169;UBERON:0000481!1.02e-09!347;UBERON:0004111!2.03e-09!241;UBERON:0001981!4.04e-09!60;UBERON:0007500!4.04e-09!60;UBERON:0004537!4.04e-09!60;UBERON:0006965!4.04e-09!60;UBERON:0001009!5.03e-09!113;UBERON:0005256!5.70e-09!143;UBERON:0000487!2.59e-08!22;UBERON:0004535!3.10e-08!110;UBERON:0001986!3.82e-08!18;UBERON:0004638!3.82e-08!18;UBERON:0004852!3.82e-08!18;UBERON:0000064!6.99e-08!219;UBERON:0000486!9.19e-08!82;UBERON:0005631!1.95e-07!14;UBERON:0000158!1.95e-07!14;UBERON:0006914!3.72e-07!25;UBERON:0002199!4.28e-07!45;UBERON:0002416!4.28e-07!45;UBERON:0000466!9.27e-07!126;UBERON:0000464!9.60e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.27e-08;22!UBERON:0004638;3.40e-08;18!UBERON:0001986;3.40e-08;18!UBERON:0004852;3.40e-08;18!UBERON:0000490;1.65e-07;33!UBERON:0006914;3.03e-07;25!UBERON:0004923;4.79e-07;55!UBERON:0005631;6.43e-07;10!UBERON:0000158;6.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.50e-14,99;UBERON:0000490,7.06e-12,148;UBERON:0000055,9.04e-12,68;UBERON:0000119,1.07e-11,309;UBERON:0004923,1.52e-11,66;UBERON:0002049,1.78e-11,78;UBERON:0007798,1.78e-11,78;UBERON:0000483,2.27e-11,306;UBERON:0002100,3.07e-11,199;UBERON:0003914,1.43e-10,117;UBERON:0004872,1.65e-10,83;UBERON:0004119,7.91e-10,160;UBERON:0000925,7.91e-10,160;UBERON:0006595,7.91e-10,160;UBERON:0004111,4.77e-09,240;UBERON:0007500,6.76e-09,59;UBERON:0001981,6.76e-09,59;UBERON:0004537,6.76e-09,59;UBERON:0006965,6.76e-09,59;UBERON:0001009,1.58e-08,112;UBERON:0000487,2.36e-08,22;UBERON:0004638,3.50e-08,18;UBERON:0001986,3.50e-08,18;UBERON:0004852,3.50e-08,18;UBERON:0000486,5.64e-08,83;UBERON:0005256,8.87e-08,122;UBERON:0004535,9.37e-08,109;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14;UBERON:0002199,2.64e-07,46;UBERON:0002416,2.64e-07,46;UBERON:0006914,3.16e-07,25;UBERON:0002050,6.00e-07,564;UBERON:0005423,7.51e-07,581;UBERON:0003104,7.90e-07,160;UBERON:0009142,7.90e-07,160 | |||
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| ||
|short_description=p1@CAV2 | |short_description=p1@CAV2 | ||
}} | }} |
Latest revision as of 07:20, 25 September 2015
Short description: | p1@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAV2_5end |
Coexpression cluster: | C2874_mature_neuroblastoma_oral_pharyngeal_normal_neuroectodermal_mesothelioma |
Association with transcript: | 0bp_to_ENST00000343213_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.36e-20 | 253 |
embryonic cell | 4.33e-18 | 250 |
squamous epithelial cell | 1.06e-15 | 63 |
mesodermal cell | 5.80e-13 | 121 |
endothelial cell of vascular tree | 1.70e-11 | 24 |
lining cell | 3.62e-11 | 58 |
barrier cell | 3.62e-11 | 58 |
endothelial cell | 1.26e-09 | 36 |
endo-epithelial cell | 6.14e-09 | 42 |
meso-epithelial cell | 1.41e-08 | 45 |
fibroblast | 1.96e-08 | 76 |
blood vessel endothelial cell | 3.50e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-08 | 18 |
fat cell | 2.34e-07 | 15 |
endodermal cell | 7.77e-07 | 58 |