FFCP PHASE1:Hg19::chr21:43733776..43733803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7033 | |EntrezGene=7033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11757 | |HGNC=11757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489676_5end | |association_with_transcript=0bp_to_ENST00000489676_5end | ||
|cluster_id=chr21:43733776..43733803,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_3_at_TFF3_5end | |description=CAGE_peak_3_at_TFF3_5end | ||
|id=chr21:43733776..43733803,- | |id=chr21:43733776..43733803,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;8.63e-11;3!CL:0002549;1.44e-07;2!CL:0000094;5.08e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.46e-11,3;CL:0002549,1.68e-07,2;CL:0000094,4.21e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-15!115;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.83e-15!115;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.91e-14;22!UBERON:0000160;7.85e-12;17!UBERON:0004921;1.50e-11;33!UBERON:0000341;2.90e-08;2!UBERON:0000059;4.31e-08;11!UBERON:0005629;1.44e-07;2!UBERON:0005358;1.44e-07;2!UBERON:0001886;1.44e-07;2!UBERON:0004086;1.44e-07;2!UBERON:0005282;1.44e-07;2!UBERON:0005281;1.44e-07;2!UBERON:0000178;2.47e-07;15!UBERON:0000179;2.47e-07;15!UBERON:0000463;2.47e-07;15!UBERON:0002108;2.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.07e-17,25;UBERON:0000160,7.09e-12,17;UBERON:0007023,5.01e-09,114;UBERON:0001007,1.14e-08,145;UBERON:0001555,1.14e-08,145;UBERON:0007026,1.14e-08,145;UBERON:0004921,1.52e-08,118;UBERON:0000341,3.66e-08,2;UBERON:0000059,3.97e-08,11;UBERON:0005629,1.68e-07,2;UBERON:0005358,1.68e-07,2;UBERON:0001886,1.68e-07,2;UBERON:0004086,1.68e-07,2;UBERON:0005282,1.68e-07,2;UBERON:0005281,1.68e-07,2;UBERON:0000178,2.28e-07,15;UBERON:0000179,2.28e-07,15;UBERON:0000463,2.28e-07,15;UBERON:0004119,2.47e-07,160;UBERON:0000925,2.47e-07,160;UBERON:0006595,2.47e-07,160;UBERON:0002108,2.51e-07,4;UBERON:0000945,4.21e-07,8;UBERON:0010039,4.21e-07,8 | |||
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| ||
|short_description=p3@TFF3 | |short_description=p3@TFF3 | ||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p3@TFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFF3_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000489676_5end |
EntrezGene: | TFF3 |
HGNC: | 11757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.46e-11 | 3 |
fibroblast of choroid plexus | 1.68e-07 | 2 |
granulocyte | 4.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.07e-17 | 25 |
intestine | 7.09e-12 | 17 |
adult organism | 5.01e-09 | 114 |
digestive system | 1.14e-08 | 145 |
digestive tract | 1.14e-08 | 145 |
primitive gut | 1.14e-08 | 145 |
subdivision of digestive tract | 1.52e-08 | 118 |
throat | 3.66e-08 | 2 |
large intestine | 3.97e-08 | 11 |
vascular plexus | 1.68e-07 | 2 |
ventricle of nervous system | 1.68e-07 | 2 |
choroid plexus | 1.68e-07 | 2 |
brain ventricle | 1.68e-07 | 2 |
ventricular system of brain | 1.68e-07 | 2 |
ventricular system of central nervous system | 1.68e-07 | 2 |
blood | 2.28e-07 | 15 |
haemolymphatic fluid | 2.28e-07 | 15 |
organism substance | 2.28e-07 | 15 |
endoderm-derived structure | 2.47e-07 | 160 |
endoderm | 2.47e-07 | 160 |
presumptive endoderm | 2.47e-07 | 160 |
small intestine | 2.51e-07 | 4 |
stomach | 4.21e-07 | 8 |
food storage organ | 4.21e-07 | 8 |