FFCP PHASE1:Hg19::chr7:100203376..100203387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-384bp_to_ENST00000472348_5end | |association_with_transcript=-384bp_to_ENST00000472348_5end | ||
|cluster_id=chr7:100203376..100203387,+ | |||
|coexpression_cluster_id=C1982 | |||
|description=CAGE_peak_15_at_PCOLCE_5end | |description=CAGE_peak_15_at_PCOLCE_5end | ||
|id=chr7:100203376..100203387,+ | |id=chr7:100203376..100203387,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.06e-36!180;CL:0000057!3.54e-22!75;CL:0002620!4.19e-13!23;CL:0000680!1.20e-12!57;CL:0000056!1.20e-12!57;CL:0000355!1.20e-12!57;CL:0000048!3.52e-12!430;CL:0000034!7.96e-12!444;CL:0000393!1.62e-11!60;CL:0000211!1.62e-11!60;CL:0000723!1.97e-11!436;CL:0000187!2.04e-11!54;CL:0000183!2.30e-11!59;CL:0000499!4.63e-09!27;CL:0000192!2.15e-08!42;CL:0000514!2.15e-08!42;CL:0000327!9.07e-08!14;CL:0002371!1.01e-07!591 | |ontology_enrichment_celltype=CL:0000055!3.06e-36!180;CL:0000057!3.54e-22!75;CL:0002620!4.19e-13!23;CL:0000680!1.20e-12!57;CL:0000056!1.20e-12!57;CL:0000355!1.20e-12!57;CL:0000048!3.52e-12!430;CL:0000034!7.96e-12!444;CL:0000393!1.62e-11!60;CL:0000211!1.62e-11!60;CL:0000723!1.97e-11!436;CL:0000187!2.04e-11!54;CL:0000183!2.30e-11!59;CL:0000499!4.63e-09!27;CL:0000192!2.15e-08!42;CL:0000514!2.15e-08!42;CL:0000327!9.07e-08!14;CL:0002371!1.01e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002570;5.14e-10;8!CL:0000499;1.54e-09;28!CL:0000135;1.38e-08;3!CL:0000388;1.38e-08;3!CL:0002564;2.84e-08;3!CL:0000723;2.00e-07;61!CL:0002559;2.13e-07;5!CL:0002320;3.22e-07;188!CL:0002552;3.94e-07;5!CL:0000134;6.96e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.10e-17,76;CL:0002320,1.79e-11,361;CL:0000048,2.13e-11,427;CL:0000723,5.42e-11,433;CL:0000034,1.81e-10,441;CL:0002570,3.90e-10,8;CL:0000499,1.01e-09,28;CL:0000135,1.25e-08,3;CL:0000388,1.25e-08,3;CL:0002564,2.63e-08,3;CL:0000134,3.10e-08,354;CL:0002559,1.04e-07,5;CL:0002552,3.87e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.26e-18!83;UBERON:0002329!2.26e-18!83;UBERON:0003077!2.26e-18!83;UBERON:0003059!2.26e-18!83;UBERON:0007282!2.26e-18!83;UBERON:0009618!2.26e-18!83;UBERON:0007285!2.26e-18!83;UBERON:0004290!5.83e-16!70;UBERON:0000486!2.51e-13!82;UBERON:0001134!6.01e-13!61;UBERON:0002036!6.01e-13!61;UBERON:0003082!6.01e-13!61;UBERON:0002385!7.35e-13!63;UBERON:0001015!7.35e-13!63;UBERON:0000383!7.35e-13!63;UBERON:0005256!8.19e-12!143;UBERON:0002199!4.21e-11!45;UBERON:0002416!4.21e-11!45;UBERON:0003102!4.25e-11!95;UBERON:0002097!3.80e-09!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.29e-14;8!UBERON:0000982;5.29e-14;8!UBERON:0004770;5.29e-14;8!UBERON:0011135;5.93e-12;5!UBERON:0002216;5.93e-12;5!UBERON:0011134;5.93e-12;5!UBERON:0002209;5.93e-12;5!UBERON:0002213;5.93e-12;5!UBERON:0007844;5.93e-12;5!UBERON:0011138;5.93e-12;5!UBERON:0001130;5.93e-12;5!UBERON:0001066;5.93e-12;5!UBERON:0001468;5.93e-12;5!UBERON:0000075;5.56e-10;16!UBERON:0001434;2.26e-09;36!UBERON:0007846;1.38e-08;3!UBERON:0000043;1.38e-08;3!UBERON:0007845;1.38e-08;3!UBERON:0004765;1.61e-08;26!UBERON:0002242;2.84e-08;3!UBERON:0002073;2.13e-07;5!UBERON:0002384;3.99e-07;198!UBERON:0002204;4.32e-07;70!UBERON:0001013;4.59e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.76e-14,8;UBERON:0000982,3.76e-14,8;UBERON:0004770,3.76e-14,8;UBERON:0011135,5.42e-12,5;UBERON:0002216,5.42e-12,5;UBERON:0011134,5.42e-12,5;UBERON:0002209,5.42e-12,5;UBERON:0002213,5.42e-12,5;UBERON:0005856,5.42e-12,5;UBERON:0005866,5.42e-12,5;UBERON:0005863,5.42e-12,5;UBERON:0007844,5.42e-12,5;UBERON:0011138,5.42e-12,5;UBERON:0001130,5.42e-12,5;UBERON:0001066,5.42e-12,5;UBERON:0001468,5.42e-12,5;UBERON:0003102,6.61e-12,99;UBERON:0002384,2.68e-11,371;UBERON:0000075,5.81e-10,16;UBERON:0002199,1.02e-08,46;UBERON:0002416,1.02e-08,46;UBERON:0007846,1.25e-08,3;UBERON:0000043,1.25e-08,3;UBERON:0007845,1.25e-08,3;UBERON:0002242,2.63e-08,3;UBERON:0003068,2.63e-08,3;UBERON:0002328,2.63e-08,3;UBERON:0004880,2.63e-08,3;UBERON:0002073,1.04e-07,5;UBERON:0005086,1.04e-07,5;UBERON:0011137,3.68e-07,14;UBERON:0001013,3.99e-07,14;UBERON:0007524,8.56e-07,73 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0.697801167972428,0,0,2.22779435328084,1.65698687863958,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.44575660953827,0.50133791063589,2.75208386025565,0.795285947051099,1.94653948121054,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,7.74458876021797,2.83734705758686,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0,0.302714855289863,2.30470369792,0,1.5608003841516,0,2.54062756938062,0.822041490506354,0.161872944368132,0.421352420106746,0.408308342509787,1.10550885580591,1.85986406116378,1.18800285728205,3.4617370098998,0,2.87447256726495,0,1.12606667884768,0,0.438977620880838,1.83892677479412,1.05166641234618,0.113432183160021,1.61450672119976,0.85422955527427,0.635795703478686,2.10063767259082,0.721367704669072,2.57640540045629,0.558350568994769,2.02531598689519,0.974370051611986,0.757301322732344,0.828449087780694,2.58633690910099,2.4850671476163,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,3.85944562915731,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,4.41026134156626,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,1.30788020649984,0.07333828582095,0.129271715757778,10.7296933755565,2.535908257668,0.531876233169741,0,0.514414748524284,1.41849132023278,1.5985330740966,0.428933980974443,3.7983512377401,0.823240336780769,0,0,1.58390374586686,0,0,0,0,0,0,0,2.29723871668228,0,0.289562613335158,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,3.18997878469764,6.5022167737758,2.71265023699736,0.831883446123229,2.3195768543631,0.788512075169673,0.468565659970853,0.902838299183157,0,3.10419213877515,0,0.553107505625109,0.955719759148911,0.783204629850962,3.43143423810856,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0,1.02341449813341,0,0,1.85051632563187,4.26148140751505,0.328508624055237,2.59627214591811,2.44041794765914,0,0,0,0.459257792658427,2.36718518408732,3.93373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.308097234229289,1.5350367472613,0.413509717453592,1.18162269355101,2.32026710262766,0.511359764496605,0.445160178233687,0,0,0,0,0,3.77774816196768,0.6970372701606,0,0,0,0.37064843820784,0,0.372158369359667,0.949138274156178,0.190630193923825,1.02359116524534,0,0.95460974377781,0.78494864019923,0.539617372749944,0.823611089208164,0.824686816419805,0.202182481573316,0,0,0,1.46228093778771,0,1.09199929126389,2.2624869112594,1.13008116620243,0.551365343546124,0,0,0,1.31178950409327,0,0.6196469961995,0.563391205064483,0,0.491245205065606,0,1.41904425628239,3.58882980006029,2.96365403663912,0.379473173765715,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.32681539055697,0,0.307801034015188,0.113942055847001,0,0,0,0,0.824378340616761,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.343972064943233,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.305994652908965,0.577901179803038,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0.275078873194468,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,1.02232813071253,0.113312091520126,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,1.16856654923612,1.66441758450784,0.568209015825267,4.27665432979378,3.55924488638614,0.915360273587694,1.05861646634267,1.08806040407946,0.295710299979268,0,0,0.155262956876259,1.65882483136342,0,1.5652351854352,0,0,0,0.545545977607678,0.214821114084977,0.928067519756987,0.398095888698616,0,3.77735275701072,2.69399591012735,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0.54604819096007,0.169732529954025,0.212574920101683,0,0,0,0,0,4.93746321166957,0.918736432059601,0,0,0,0,0,0,0.16147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| ||
|short_description=p15@PCOLCE | |short_description=p15@PCOLCE | ||
}} | }} |
Latest revision as of 07:48, 20 September 2015
Short description: | p15@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PCOLCE_5end |
Coexpression cluster: | C1982_Fibroblast_Mesenchymal_tenocyte_Hair_normal_Synoviocyte_mesenchymal |
Association with transcript: | -384bp_to_ENST00000472348_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.10e-17 | 76 |
connective tissue cell | 1.79e-11 | 361 |
multi fate stem cell | 2.13e-11 | 427 |
somatic stem cell | 5.42e-11 | 433 |
stem cell | 1.81e-10 | 441 |
mesenchymal stem cell of adipose | 3.90e-10 | 8 |
stromal cell | 1.01e-09 | 28 |
fibrocyte | 1.25e-08 | 3 |
tendon cell | 1.25e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 2.63e-08 | 3 |
mesenchymal cell | 3.10e-08 | 354 |
hair follicle cell | 1.04e-07 | 5 |
fibroblast of gingiva | 3.87e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.76e-14 | 8 |
skeletal joint | 3.76e-14 | 8 |
articular system | 3.76e-14 | 8 |
intervertebral cartilage | 5.42e-12 | 5 |
symphysis | 5.42e-12 | 5 |
nonsynovial joint | 5.42e-12 | 5 |
fibrous joint | 5.42e-12 | 5 |
cartilaginous joint | 5.42e-12 | 5 |
developing mesenchymal condensation | 5.42e-12 | 5 |
pre-cartilage condensation | 5.42e-12 | 5 |
cartilaginous condensation | 5.42e-12 | 5 |
cartilage element | 5.42e-12 | 5 |
post-cranial axial skeletal system | 5.42e-12 | 5 |
vertebral column | 5.42e-12 | 5 |
intervertebral disk | 5.42e-12 | 5 |
intervertebral joint | 5.42e-12 | 5 |
surface structure | 6.61e-12 | 99 |
connective tissue | 2.68e-11 | 371 |
subdivision of skeletal system | 5.81e-10 | 16 |
integument | 1.02e-08 | 46 |
integumental system | 1.02e-08 | 46 |
dense regular connective tissue | 1.25e-08 | 3 |
tendon | 1.25e-08 | 3 |
regular connective tissue | 1.25e-08 | 3 |
nucleus pulposus | 2.63e-08 | 3 |
axial mesoderm | 2.63e-08 | 3 |
notochord | 2.63e-08 | 3 |
chordamesoderm | 2.63e-08 | 3 |
hair follicle | 1.04e-07 | 5 |
hair follicle placode | 1.04e-07 | 5 |
axial skeletal system | 3.68e-07 | 14 |
adipose tissue | 3.99e-07 | 14 |
dense mesenchyme tissue | 8.56e-07 | 73 |