FFCP PHASE1:Hg19::chr6:64516227..64516239,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346007 | |EntrezGene=346007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21555 | |HGNC=21555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000486069_5end | |association_with_transcript=-94bp_to_ENST00000486069_5end | ||
|cluster_id=chr6:64516227..64516239,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_EYS_5end | |description=CAGE_peak_3_at_EYS_5end | ||
|id=chr6:64516227..64516239,- | |id=chr6:64516227..64516239,- | ||
|ontology_enrichment_celltype=CL:0000223!3.33e-12!59;CL:0000066!6.15e-12!254;CL:0002076!1.70e-07!43 | |ontology_enrichment_celltype=CL:0000223!3.33e-12!59;CL:0000066!6.15e-12!254;CL:0002076!1.70e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.74e-27;12!CL:0002231;7.76e-08;3!CL:0000307;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.19e-27,12;CL:0000223,2.91e-12,58;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3;CL:0002231,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.03e-14;13!UBERON:0001041;6.19e-11;30!CL:0000223;1.98e-09;58!UBERON:0004161;3.76e-08;11!UBERON:0009847;5.73e-08;3!UBERON:0003353;5.73e-08;3!CL:0000377;7.76e-08;3 | |||
|ontology_enrichment_disease=DOID:305!3.27e-12!106;DOID:0050687!2.08e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:4556;7.76e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,7.26e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.42e-19!155;UBERON:0001555!7.42e-19!155;UBERON:0007026!7.42e-19!155;UBERON:0004119!1.98e-18!169;UBERON:0000925!1.98e-18!169;UBERON:0006595!1.98e-18!169;UBERON:0005911!3.80e-18!82;UBERON:0004921!4.32e-16!129;UBERON:0004185!4.32e-16!129;UBERON:0003929!7.90e-14!54;UBERON:0000077!4.02e-13!130;UBERON:0003104!7.29e-11!238;UBERON:0009142!7.29e-11!238;UBERON:0005153!9.18e-11!37;UBERON:0001041!1.52e-10!98;UBERON:0008947!2.68e-10!38;UBERON:0003258!2.68e-10!38;UBERON:0002100!1.77e-09!216;UBERON:0001004!3.92e-09!72;UBERON:0002367!1.58e-08!11;UBERON:0010147!1.58e-08!11;UBERON:0009846!1.58e-08!11;UBERON:0003353!1.58e-08!11;UBERON:0004902!1.58e-08!11;UBERON:0003820!1.58e-08!11;UBERON:0009847!1.58e-08!11;UBERON:0000065!2.01e-08!53;UBERON:0005177!6.56e-08!107;UBERON:0000162!7.82e-08!14;UBERON:0001353!7.82e-08!14;UBERON:0000163!7.82e-08!14;UBERON:0006866!7.82e-08!14;UBERON:0000164!7.82e-08!14;UBERON:0000931!7.82e-08!14;UBERON:0009497!9.71e-08!25;UBERON:0000015!9.71e-08!25;UBERON:0002423!9.71e-08!25;UBERON:0006235!9.71e-08!25;UBERON:0004161!9.71e-08!25;UBERON:0003937!1.14e-07!12;UBERON:0005399!1.14e-07!12;UBERON:0000481!1.37e-07!347;UBERON:0000161!2.57e-07!35;UBERON:0004122!3.56e-07!15;UBERON:0005256!4.72e-07!143;UBERON:0007499!6.80e-07!25;UBERON:0008835!9.80e-07!22;UBERON:0003894!9.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.32e-28;25!UBERON:0002107;2.58e-26;19!UBERON:0006925;2.58e-26;19!UBERON:0002365;9.32e-17;31!UBERON:0002330;9.32e-17;31!UBERON:0002368;1.85e-13;33!UBERON:0002530;9.06e-11;57!UBERON:0000949;1.19e-08;43!UBERON:0005172;3.80e-08;52!UBERON:0005173;3.80e-08;52!UBERON:0002367;3.83e-08;11!UBERON:0010147;3.83e-08;11!UBERON:0003937;1.54e-07;12!UBERON:0005399;1.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.68e-32,22;UBERON:0003894,1.68e-32,22;UBERON:0009854,4.28e-31,23;UBERON:0007499,1.28e-28,25;UBERON:0009497,1.28e-28,25;UBERON:0000015,1.28e-28,25;UBERON:0002423,1.28e-28,25;UBERON:0006235,1.28e-28,25;UBERON:0004161,1.28e-28,25;UBERON:0009856,1.60e-27,26;UBERON:0002107,2.45e-26,19;UBERON:0006925,2.45e-26,19;UBERON:0008836,2.45e-26,19;UBERON:0003929,3.31e-23,54;UBERON:0005911,3.35e-19,82;UBERON:0002530,2.77e-16,59;UBERON:0002365,3.09e-16,31;UBERON:0002330,3.09e-16,31;UBERON:0004921,3.14e-16,118;UBERON:0002368,2.11e-14,35;UBERON:0001041,2.76e-14,87;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0000949,3.11e-11,45;UBERON:0005256,4.30e-10,122;UBERON:0002100,1.63e-09,199;UBERON:0005177,2.11e-09,101;UBERON:0005172,2.23e-09,54;UBERON:0005173,2.23e-09,54;UBERON:0009569,1.90e-08,112;UBERON:0002417,1.90e-08,60;UBERON:0000916,1.90e-08,60;UBERON:0011216,2.87e-08,223;UBERON:0000490,3.05e-08,148;UBERON:0002367,4.04e-08,11;UBERON:0010147,4.04e-08,11;UBERON:0009846,4.04e-08,11;UBERON:0003353,4.04e-08,11;UBERON:0004902,4.04e-08,11;UBERON:0003820,4.04e-08,11;UBERON:0009847,4.04e-08,11;UBERON:0003104,1.37e-07,160;UBERON:0009142,1.37e-07,160;UBERON:0001048,1.40e-07,160;UBERON:0003937,1.62e-07,12;UBERON:0005399,1.62e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,5.07020139287323,3.9313088667105,4.72631925345123,0,0.983907508344908,0,0,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0,1.0877350463246,0.200506470303285,0.184161977871793,0.459257792658427,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0,0.340906509664404,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.673554789078584,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.492692742319255,0,0,0,0.548167698587004,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.720273989940749,0.621262677827163,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,2.95282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,1.90080605734932,0.537862017998534,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,2.93104467356165,0,0,0,0.684347351537318,0,0.106787412567695,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,3.33694205676207,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0.255640214277473,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.78894425931944,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,5.07020139287323,3.9313088667105,4.72631925345123,0,0.983907508344908,0,0,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0,1.0877350463246,0.200506470303285,0.184161977871793,0.459257792658427,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0,0.340906509664404,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.673554789078584,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.492692742319255,0,0,0,0.548167698587004,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.720273989940749,0.621262677827163,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,2.95282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,1.90080605734932,0.537862017998534,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,2.93104467356165,0,0,0,0.684347351537318,0,0.106787412567695,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,3.33694205676207,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0.255640214277473,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.78894425931944,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@EYS | |short_description=p3@EYS | ||
}} | }} |
Latest revision as of 13:04, 19 September 2015
Short description: | p3@EYS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EYS_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -94bp_to_ENST00000486069_5end |
EntrezGene: | EYS |
HGNC: | 21555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.19e-27 | 12 |
endodermal cell | 2.91e-12 | 58 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
epithelial cell of prostate | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 7.26e-08 | 3 |