FFCP PHASE1:Hg19::chr20:5903694..5903708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903694..5903708,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903694..5903708,+ | |description=CAGE_peak_at_chr20:5903694..5903708,+ | ||
|id=chr20:5903694..5903708,+ | |id=chr20:5903694..5903708,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-54;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr20:5903694..5903708,+ | |short_description=p@chr20:5903694..5903708,+ | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903694..5903708, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903694..5903708, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.28e-37 | 2 |
cerebellum | 2.32e-27 | 6 |
rhombic lip | 2.32e-27 | 6 |
gland of diencephalon | 3.57e-19 | 4 |
neuroendocrine gland | 3.57e-19 | 4 |
regional part of metencephalon | 1.68e-18 | 9 |
metencephalon | 1.68e-18 | 9 |
future metencephalon | 1.68e-18 | 9 |
segmental subdivision of hindbrain | 4.72e-14 | 12 |
hindbrain | 4.72e-14 | 12 |
presumptive hindbrain | 4.72e-14 | 12 |
segmental subdivision of nervous system | 5.05e-13 | 13 |
regional part of nervous system | 7.40e-12 | 53 |
regional part of brain | 7.40e-12 | 53 |
diencephalon | 2.18e-11 | 7 |
future diencephalon | 2.18e-11 | 7 |
posterior neural tube | 2.26e-11 | 15 |
chordal neural plate | 2.26e-11 | 15 |
neural tube | 3.16e-11 | 56 |
neural rod | 3.16e-11 | 56 |
future spinal cord | 3.16e-11 | 56 |
neural keel | 3.16e-11 | 56 |
middle temporal gyrus | 2.99e-10 | 2 |
nervous system | 2.93e-09 | 89 |
brain | 4.13e-09 | 68 |
future brain | 4.13e-09 | 68 |
central nervous system | 1.19e-07 | 81 |
neural plate | 1.19e-07 | 82 |
presumptive neural plate | 1.19e-07 | 82 |
adult organism | 2.10e-07 | 114 |
neurectoderm | 2.73e-07 | 86 |
duodenum | 3.35e-07 | 2 |