FFCP PHASE1:Hg19::chr20:5903160..5903179,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903160..5903179,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903160..5903179,+ | |description=CAGE_peak_at_chr20:5903160..5903179,+ | ||
|id=chr20:5903160..5903179,+ | |id=chr20:5903160..5903179,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.27e-32;3!UBERON:0010227;1.32e-11;1!UBERON:0006601;1.33e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-48!57;UBERON:0005068!1.49e-48!57;UBERON:0006241!1.49e-48!57;UBERON:0007135!1.49e-48!57;UBERON:0002616!1.40e-46!59;UBERON:0002780!1.42e-43!41;UBERON:0001890!1.42e-43!41;UBERON:0006240!1.42e-43!41;UBERON:0000955!1.69e-42!69;UBERON:0006238!1.69e-42!69;UBERON:0003080!2.33e-42!42;UBERON:0001017!1.29e-38!82;UBERON:0007023!3.72e-37!115;UBERON:0005743!2.44e-36!86;UBERON:0000073!6.31e-36!94;UBERON:0001016!6.31e-36!94;UBERON:0003075!1.29e-34!86;UBERON:0007284!1.29e-34!86;UBERON:0002346!1.32e-32!90;UBERON:0001893!2.63e-32!34;UBERON:0001869!9.16e-32!32;UBERON:0002791!2.37e-30!33;UBERON:0002020!9.45e-30!34;UBERON:0003528!9.45e-30!34;UBERON:0003056!8.75e-29!61;UBERON:0002619!6.50e-28!22;UBERON:0001950!1.72e-27!20;UBERON:0000033!3.20e-25!123;UBERON:0000956!3.77e-24!25;UBERON:0000203!3.77e-24!25;UBERON:0000153!1.55e-23!129;UBERON:0007811!1.55e-23!129;UBERON:0004121!1.00e-21!169;UBERON:0000924!6.07e-21!173;UBERON:0006601!6.07e-21!173;UBERON:0001871!2.35e-15!7;UBERON:0001894!3.09e-13!7;UBERON:0006222!3.09e-13!7;UBERON:0003296!5.75e-12!4;UBERON:0010133!5.75e-12!4;UBERON:0000369!1.07e-10!4;UBERON:0002435!1.07e-10!4;UBERON:0000204!1.07e-10!4;UBERON:0010082!1.07e-10!4;UBERON:0000200!1.94e-10!6;UBERON:0004733!2.09e-10!12;UBERON:0002028!2.09e-10!12;UBERON:0007277!2.09e-10!12;UBERON:0002420!3.97e-10!9;UBERON:0007245!3.97e-10!9;UBERON:0010009!3.97e-10!9;UBERON:0010011!3.97e-10!9;UBERON:0000454!3.97e-10!9;UBERON:0000025!8.79e-10!194;UBERON:0004732!1.64e-09!13;UBERON:0004111!5.22e-09!241;UBERON:0005383!1.18e-08!3;UBERON:0005382!1.18e-08!3;UBERON:0000349!1.83e-08!5;UBERON:0001872!2.28e-08!5;UBERON:0002771!2.87e-08!3;UBERON:0003076!4.43e-08!15;UBERON:0003057!4.43e-08!15;UBERON:0002680!7.85e-08!9;UBERON:0001895!7.85e-08!9;UBERON:0010092!7.85e-08!9;UBERON:0000481!9.31e-08!347;UBERON:0002108!3.85e-07!14;UBERON:0002308!3.91e-07!9;UBERON:0000125!3.91e-07!9;UBERON:0000007!6.10e-07!2;UBERON:0000064!6.38e-07!219;UBERON:0000475!9.58e-07!365 | |||
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| ||
|short_description=p@chr20:5903160..5903179,+ | |short_description=p@chr20:5903160..5903179,+ | ||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903160..5903179, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903160..5903179, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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gastrointestinal system cancer | 1.73e-07 | 14 |