FFCP PHASE1:Hg19::chr6:42110342..42110365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=647024 | |EntrezGene=647024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21288 | |HGNC=21288 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000356542_5end | |association_with_transcript=0bp_to_ENST00000356542_5end | ||
|cluster_id=chr6:42110342..42110365,- | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_C6orf132_5end | |description=CAGE_peak_1_at_C6orf132_5end | ||
|id=chr6:42110342..42110365,- | |id=chr6:42110342..42110365,- | ||
|ontology_enrichment_celltype=CL:0000066!3.27e-35!254;CL:0002076!1.35e-15!43;CL:0000223!1.77e-13!59;CL:0002251!1.31e-08!21;CL:0002368!1.11e-07!13;CL:0002321!9.57e-07!248 | |ontology_enrichment_celltype=CL:0000066!3.27e-35!254;CL:0002076!1.35e-15!43;CL:0000223!1.77e-13!59;CL:0002251!1.31e-08!21;CL:0002368!1.11e-07!13;CL:0002321!9.57e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.05e-16;42!CL:0002251;9.05e-11;20!CL:0002368;6.77e-10;13!CL:0002202;4.85e-07;9!CL:0002632;4.85e-07;9!CL:1000507;7.62e-07;10!CL:1000494;7.62e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-38,253;CL:0002076,6.70e-21,42;CL:0000223,9.06e-19,58;CL:0002251,9.15e-11,20;CL:0002368,6.95e-10,13;CL:0000076,5.19e-09,63;CL:0002202,4.91e-07,9;CL:0002632,4.91e-07,9;CL:1000507,8.38e-07,10;CL:1000494,8.38e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-09;58!UBERON:0006595;8.06e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.12e-20!106;DOID:0050687!2.53e-12!143;DOID:1749!3.61e-09!14;DOID:299!5.97e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-11;14!DOID:299;3.98e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.63e-16,106;DOID:1749,1.52e-11,14;DOID:0050687,5.72e-11,143;DOID:299,3.65e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.10e-24!169;UBERON:0000925!3.10e-24!169;UBERON:0006595!3.10e-24!169;UBERON:0001007!4.02e-19!155;UBERON:0001555!4.02e-19!155;UBERON:0007026!4.02e-19!155;UBERON:0004921!2.42e-17!129;UBERON:0004185!2.42e-17!129;UBERON:0000464!1.32e-16!104;UBERON:0000077!1.61e-16!130;UBERON:0000466!4.79e-16!126;UBERON:0001004!6.80e-15!72;UBERON:0003104!8.05e-13!238;UBERON:0009142!8.05e-13!238;UBERON:0000065!3.22e-12!53;UBERON:0001041!1.18e-11!98;UBERON:0009569!2.61e-10!113;UBERON:0001048!3.41e-10!168;UBERON:0005911!5.61e-10!82;UBERON:0005178!1.94e-09!34;UBERON:0002224!1.94e-09!34;UBERON:0000072!2.37e-09!46;UBERON:0000915!3.35e-09!52;UBERON:0008947!3.66e-09!38;UBERON:0003258!3.66e-09!38;UBERON:0000481!3.93e-09!347;UBERON:0005181!7.79e-09!35;UBERON:0005177!1.13e-08!107;UBERON:0002553!1.22e-08!70;UBERON:0005156!1.86e-08!59;UBERON:0000990!1.86e-08!59;UBERON:0005153!3.44e-08!37;UBERON:0002100!4.09e-08!216;UBERON:0000062!6.24e-08!511;UBERON:0000161!7.59e-08!35;UBERON:0003133!1.08e-07!48;UBERON:0001008!1.25e-07!45;UBERON:0006554!2.58e-07!44;UBERON:0000063!2.96e-07!97;UBERON:0000468!5.30e-07!659;UBERON:0005157!6.84e-07!51;UBERON:0007196!9.42e-07!14;UBERON:0001558!9.42e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.51e-11;33!UBERON:0005178;4.31e-09;34!UBERON:0002224;4.31e-09;34!UBERON:0005181;1.61e-08;35!UBERON:0006554;5.94e-08;30!UBERON:0001008;5.94e-08;30!UBERON:0001555;9.51e-08;54!UBERON:0005911;1.24e-07;36!UBERON:0001041;2.68e-07;14!UBERON:0004807;2.86e-07;22!UBERON:0000161;2.98e-07;19!UBERON:0000166;2.98e-07;19!UBERON:0007196;4.55e-07;15!UBERON:0001558;4.55e-07;15!UBERON:0000165;5.96e-07;28!UBERON:0004211;7.62e-07;10!UBERON:0009773;7.62e-07;10!UBERON:0001231;7.62e-07;10!UBERON:0004810;7.62e-07;10!UBERON:0002048;9.59e-07;22!UBERON:0000117;9.59e-07;22!UBERON:0000171;9.59e-07;22!UBERON:0000170;9.59e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-26,160;UBERON:0000925,1.39e-26,160;UBERON:0006595,1.39e-26,160;UBERON:0001007,1.88e-20,145;UBERON:0001555,1.88e-20,145;UBERON:0007026,1.88e-20,145;UBERON:0004921,1.83e-17,118;UBERON:0001004,3.71e-13,74;UBERON:0005177,4.60e-13,101;UBERON:0005911,3.11e-12,82;UBERON:0001008,1.22e-11,48;UBERON:0006554,3.32e-11,47;UBERON:0001041,3.46e-11,87;UBERON:0009569,6.54e-11,112;UBERON:0005178,2.54e-10,34;UBERON:0002224,2.54e-10,34;UBERON:0000161,5.63e-10,36;UBERON:0005181,8.63e-10,35;UBERON:0005153,9.64e-10,37;UBERON:0000065,3.82e-09,54;UBERON:0005157,2.33e-08,47;UBERON:0000166,3.12e-08,22;UBERON:0000915,6.09e-08,52;UBERON:0005631,1.05e-07,14;UBERON:0000158,1.05e-07,14;UBERON:0007196,5.41e-07,15;UBERON:0001558,5.41e-07,15;UBERON:0002530,5.98e-07,59;UBERON:0005156,7.89e-07,59;UBERON:0000990,7.89e-07,59;UBERON:0004810,8.38e-07,10;UBERON:0002048,9.74e-07,22;UBERON:0000117,9.74e-07,22;UBERON:0000171,9.74e-07,22;UBERON:0000170,9.74e-07,22;UBERON:0005597,9.74e-07,22;UBERON:0000118,9.74e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,38.5802280307369,105.367976363837,18.1306338868043,17.9361545195348,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.612002073732759,0,0,0,0,0,0,0,0,0,0.464448369948228,34.0185853057203,48.4941529232983,41.4124491386802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,7.13835961462534,93.2595938028908,78.9770863130835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,53.6395684135317,0.993943903390637,0,0,0,1.41867352879343,6.16745360156538,0,0.24666754841716,0,0.134710672069688,0,0,0,0.937285727335186,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,1.43723628363248,0,0,0,1.31693286264251,0,0.300476117813194,0.680593098960126,0.717558542755448,0,0.211931901159562,0,0.103052529238439,0.772921620136887,0.18611685633159,0.675105328965065,0.68205903612839,0.757301322732344,0.184099797284599,0,0.710019185033229,0.10075209822764,0.339121184620975,33.2408667440871,21.2741974060851,30.6880917066234,22.4431619278456,24.9155964444392,17.4290914304278,10.4697665565524,22.2042348770553,17.8838905947157,0,0.643240938192885,0,0,0,0.591534000199219,0.505754070234305,0.723033089650446,0.55146986366197,1.74303555273925,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,0,1.40241773803446,2.4694440679884,4.41026134156626,0,0,0,0,23.6137802002778,0.171567810298526,36.6565953264809,41.5886487053192,30.1586917234893,25.3692339734371,0,1.03993478527958,0,0,0.234817388471643,0,0,0,16.5942923571448,19.7451817281821,0,0,0,25.3081351764298,19.8218911274654,27.7879190595077,23.016540334632,21.2162775115192,50.2231309706427,0,0,0.829312462163088,1.29707958075265,1.2624243342638,0.253991577168676,0,0,3.4214489204541,0,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0.387815147273333,0,0,1.06375246633948,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0.823240336780769,0,0,0,2.1100756394171,0.871533458600294,8.69765023283896,0,0,0,0.479249710983165,2.29723871668228,0,1.01346914667305,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,3.46945313074656,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,18.4907818582218,31.6227335069944,21.4697108264073,0.248107807818777,0.306923946576125,0.841980283299221,0.256278298511402,1.02341449813341,1.12597744800525,0,0.154209693802656,0,0.492762936082855,0,0.697262270759755,15.5908689973193,30.4769834860993,79.1896504848708,0,0,0.131124414959424,36.9983682584078,13.4006686561682,14.1182958451834,11.6911379722609,2.11103257785751,0,0,3.23873874153209,0,4.06419656315779,9.03041592938736,21.4096069357832,39.06057241965,10.2982387172202,0,0,0.512900250232778,2.29610251989794,1.30151357865721,3.81251743096572,0,0,75.2287854774986,45.5042172225565,3.21367859688319,0,0,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0,27.1067261192004,31.9035511826076,12.5060458244692,48.4545770298084,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0,0,0.179872457583315,0,0.235624804691373,1.01091240786658,0,0.421258456238981,0.975267478179181,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0,0,0.876901770507525,1.15755106853338,0.655894752046633,1.01455188481352,0.92947049429925,0,0.286822704408103,0.196498082026242,1.426684205925,0.354761064070598,3.79993743535795,5.92730807327823,0.379473173765715,0.349934720244983,34.0626279048313,42.8993456342904,49.0009431875952,3.20088922641049,29.2743653416436,38.7484394035539,48.7773168890343,10.3375530093132,0,0,0,0,0,0,0,0,0,0,41.9018769327564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8426486367398,0.293016358543788,0,0,0,89.5291817766337,17.8178808499583,108.12056713893,0,0,0,0,3.80025734630388,4.18420775327246,6.90709788827869,3.77899121781414,0,0,2.17727711363265,42.4178617415383,50.842013607873,0,8.38468947913936,0,3.33410970433911,0,0,0,21.6155041700744,49.6772799978392,4.34999745260876,16.841430346254,23.89984312752,19.8565652685067,0.344743373241465,0,0,0,0,0,0.331737779793674,0,0,0,47.1252255661679,26.4708889253062,0,34.1234578494329,10.232371462714,29.8780272785522,13.3980487087406,3.20591576906518,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0.843992258112108,26.7701805381002,32.7939125726743,0.216388639742091,15.9241908972561,39.9828191555093,13.4426631885398,0,0,0,0.067401132980677,0,0,0,21.5231080825299,0,2.76209081994573,12.0990716048664,0.30607276163049,0.189559738885464,0.901940516486955,1.24425829676697,0,0,0,0,10.8151627491321,0,44.604852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| ||
|short_description=p1@C6orf132 | |short_description=p1@C6orf132 | ||
}} | }} |
Latest revision as of 19:42, 18 September 2015
Short description: | p1@C6orf132 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf132_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000356542_5end |
EntrezGene: | C6orf132 |
HGNC: | 21288 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-38 | 253 |
endo-epithelial cell | 6.70e-21 | 42 |
endodermal cell | 9.06e-19 | 58 |
epithelial cell of alimentary canal | 9.15e-11 | 20 |
respiratory epithelial cell | 6.95e-10 | 13 |
squamous epithelial cell | 5.19e-09 | 63 |
epithelial cell of tracheobronchial tree | 4.91e-07 | 9 |
epithelial cell of lower respiratory tract | 4.91e-07 | 9 |
kidney tubule cell | 8.38e-07 | 10 |
nephron tubule epithelial cell | 8.38e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.63e-16 | 106 |
squamous cell carcinoma | 1.52e-11 | 14 |
cell type cancer | 5.72e-11 | 143 |
adenocarcinoma | 3.65e-08 | 25 |