FFCP PHASE1:Hg19::chr13:29001955..29001966,-: Difference between revisions
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|id=chr13:29001955..29001966,-
|short_description=p@chr13:29001955..29001966,-
|description=CAGE_peak_at_chr13:29001955..29001966,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:29001955..29001966,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:29001955..29001966,- | |||
|id=chr13:29001955..29001966,- | |||
|ontology_enrichment_celltype=CL:0002541!1.11e-10!3;CL:0002057!4.79e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.99e-45;3!CL:0000349;1.75e-16;19!CL:0002537;6.13e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.00e-45,3;CL:0000349,1.75e-16,19;CL:0002537,6.13e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.79e-11!115;UBERON:0000476!1.11e-10!3;UBERON:0000920!1.11e-10!3;UBERON:0002081!6.69e-08!2;UBERON:0005631!7.88e-08!14;UBERON:0000158!7.88e-08!14;UBERON:0003124!1.20e-07!7;UBERON:0000478!2.50e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.99e-45;3!UBERON:0000920;4.99e-45;3!UBERON:0002134;7.06e-34;1!UBERON:0005208;7.06e-34;1!UBERON:0004145;7.06e-34;1!UBERON:0005946;7.06e-34;1!UBERON:0005965;7.06e-34;1!UBERON:0002078;7.06e-34;1!UBERON:0005631;1.68e-30;10!UBERON:0000158;1.68e-30;10!UBERON:0002081;1.07e-17;2!UBERON:0002133;1.07e-17;2!UBERON:0000478;3.20e-13;24!UBERON:0003978;2.89e-12;3!UBERON:0004151;2.89e-12;3!UBERON:0000946;2.89e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.00e-45,3;UBERON:0002134,5.05e-34,1;UBERON:0005208,5.05e-34,1;UBERON:0005946,5.05e-34,1;UBERON:0005965,5.05e-34,1;UBERON:0002078,5.05e-34,1;UBERON:0005631,4.67e-22,14;UBERON:0000158,4.67e-22,14;UBERON:0003124,5.35e-20,7;UBERON:0002081,9.07e-18,2;UBERON:0002133,9.07e-18,2;UBERON:0010227,9.07e-18,2;UBERON:0000478,3.20e-13,24;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0004151,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0004145,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0004923,1.32e-08,66 | |||
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| ||
|short_description=p@chr13:29001955..29001966,- | |||
}} | }} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29001955..29001966, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29001955..29001966, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.00e-45 | 3 |
extraembryonic cell | 1.75e-16 | 19 |
amnion mesenchymal stem cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.00e-45 | 3 |
tricuspid valve | 5.05e-34 | 1 |
right atrium valve | 5.05e-34 | 1 |
outflow tract of atrium | 5.05e-34 | 1 |
outflow part of right atrium | 5.05e-34 | 1 |
right cardiac atrium | 5.05e-34 | 1 |
extraembryonic membrane | 4.67e-22 | 14 |
membranous layer | 4.67e-22 | 14 |
chorion | 5.35e-20 | 7 |
cardiac atrium | 9.07e-18 | 2 |
atrioventricular valve | 9.07e-18 | 2 |
future cardiac atrium | 9.07e-18 | 2 |
extraembryonic structure | 3.20e-13 | 24 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardiac chamber | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
outflow tract | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
organ component layer | 1.32e-08 | 66 |