FFCP PHASE1:Hg19::chr13:27335128..27335165,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:27335128..27335165,-
|short_description=p2@GPR12
|description=CAGE_peak_2_at_GPR12_5end
|association_with_transcript=-206bp_to_ENST00000405846,NM_005288,u...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2835 | |EntrezGene=2835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4466 | |HGNC=4466 | ||
|TSSclassifier=strong | |||
|UniProt=P47775,A8K2F5 | |UniProt=P47775,A8K2F5 | ||
|association_with_transcript=-206bp_to_ENST00000405846,NM_005288,uc010aal.2,uc010tdl.1_5end | |||
|cluster_id=chr13:27335128..27335165,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_GPR12_5end | |||
|id=chr13:27335128..27335165,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.76e-10;2!CL:0000242;2.76e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.29e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.53e-15;3!UBERON:0006601;8.53e-14;82!UBERON:0010122;6.09e-11;2!UBERON:0003056;5.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-57!57;UBERON:0005068!1.26e-57!57;UBERON:0006241!1.26e-57!57;UBERON:0007135!1.26e-57!57;UBERON:0005743!1.33e-53!86;UBERON:0000073!5.99e-53!94;UBERON:0001016!5.99e-53!94;UBERON:0001017!2.70e-52!82;UBERON:0007023!4.55e-50!115;UBERON:0002616!4.91e-50!59;UBERON:0002780!2.49e-49!41;UBERON:0001890!2.49e-49!41;UBERON:0006240!2.49e-49!41;UBERON:0003080!6.65e-48!42;UBERON:0000955!4.34e-47!69;UBERON:0006238!4.34e-47!69;UBERON:0001893!6.73e-44!34;UBERON:0002020!1.23e-43!34;UBERON:0003528!1.23e-43!34;UBERON:0003075!7.00e-43!86;UBERON:0007284!7.00e-43!86;UBERON:0002791!4.49e-42!33;UBERON:0001869!6.48e-41!32;UBERON:0002346!2.74e-40!90;UBERON:0004121!1.83e-36!169;UBERON:0003056!1.32e-35!61;UBERON:0000924!3.63e-35!173;UBERON:0006601!3.63e-35!173;UBERON:0001950!3.77e-34!20;UBERON:0002619!9.05e-34!22;UBERON:0000033!1.84e-33!123;UBERON:0000153!1.77e-32!129;UBERON:0007811!1.77e-32!129;UBERON:0000956!4.58e-29!25;UBERON:0000203!4.58e-29!25;UBERON:0002308!3.19e-16!9;UBERON:0000125!3.19e-16!9;UBERON:0002420!3.31e-16!9;UBERON:0007245!3.31e-16!9;UBERON:0010009!3.31e-16!9;UBERON:0010011!3.31e-16!9;UBERON:0000454!3.31e-16!9;UBERON:0009663!3.20e-13!7;UBERON:0000025!4.45e-12!194;UBERON:0000200!8.13e-12!6;UBERON:0004111!1.23e-11!241;UBERON:0001871!1.74e-11!7;UBERON:0000064!3.73e-11!219;UBERON:0003076!5.48e-11!15;UBERON:0003057!5.48e-11!15;UBERON:0004732!8.69e-11!13;UBERON:0001872!1.57e-10!5;UBERON:0002021!1.70e-10!5;UBERON:0000062!1.55e-09!511;UBERON:0000477!1.66e-09!286;UBERON:0004733!2.50e-09!12;UBERON:0002028!2.50e-09!12;UBERON:0007277!2.50e-09!12;UBERON:0000369!5.43e-09!4;UBERON:0002435!5.43e-09!4;UBERON:0000204!5.43e-09!4;UBERON:0010082!5.43e-09!4;UBERON:0000475!1.17e-08!365;UBERON:0000483!7.20e-08!309;UBERON:0002298!8.78e-08!8;UBERON:0000119!1.19e-07!312;UBERON:0000922!1.20e-07!612;UBERON:0002680!1.75e-07!9;UBERON:0001895!1.75e-07!9;UBERON:0010092!1.75e-07!9;UBERON:0005383!3.63e-07!3;UBERON:0005382!3.63e-07!3;UBERON:0001894!5.83e-07!7;UBERON:0006222!5.83e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.18e-53;20!UBERON:0001869;2.49e-51;32!UBERON:0001893;5.12e-49;34!UBERON:0002619;1.99e-48;22!UBERON:0002791;7.59e-47;32!UBERON:0003528;3.36e-43;34!UBERON:0002020;3.36e-43;34!UBERON:0000956;2.03e-42;25!UBERON:0000203;2.03e-42;25!UBERON:0002780;2.04e-40;41!UBERON:0001890;2.04e-40;41!UBERON:0000073;8.03e-34;53!UBERON:0002616;8.03e-34;53!UBERON:0000955;2.47e-28;68!UBERON:0001017;3.72e-25;75!UBERON:0001872;1.19e-23;5!UBERON:0001016;8.91e-23;83!UBERON:0000369;9.93e-20;4!UBERON:0002435;9.93e-20;4!UBERON:0000204;9.93e-20;4!UBERON:0000200;7.15e-19;6!UBERON:0002021;1.56e-15;5!UBERON:0005383;3.08e-15;3!UBERON:0005382;3.08e-15;3!UBERON:0009663;2.53e-11;7!UBERON:0001873;6.09e-11;2!UBERON:0001871;8.72e-11;6!UBERON:0007023;1.29e-10;114!UBERON:0001897;2.03e-10;2!UBERON:0010225;2.03e-10;2!UBERON:0002771;7.69e-10;2!UBERON:0011216;8.96e-10;132!UBERON:0004732;6.24e-09;13!UBERON:0002420;8.07e-09;9!UBERON:0000125;8.07e-09;9!UBERON:0007245;8.07e-09;9!UBERON:0002308;8.07e-09;9!UBERON:0010009;8.07e-09;9!UBERON:0010011;8.07e-09;9!UBERON:0000454;8.07e-09;9!UBERON:0002037;5.47e-08;6!UBERON:0001870;5.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.12e-62,53;UBERON:0002616,2.12e-62,53;UBERON:0002780,3.47e-59,41;UBERON:0001890,3.47e-59,41;UBERON:0003080,3.47e-59,41;UBERON:0006240,3.47e-59,41;UBERON:0001049,8.80e-59,56;UBERON:0005068,8.80e-59,56;UBERON:0006241,8.80e-59,56;UBERON:0007135,8.80e-59,56;UBERON:0001869,3.72e-58,32;UBERON:0001017,7.10e-55,81;UBERON:0001893,1.50e-54,34;UBERON:0000955,3.34e-54,68;UBERON:0006238,3.34e-54,68;UBERON:0001950,1.83e-53,20;UBERON:0002791,1.87e-52,32;UBERON:0001016,4.80e-52,89;UBERON:0003528,3.45e-49,34;UBERON:0002020,3.45e-49,34;UBERON:0002619,1.70e-48,22;UBERON:0003056,2.03e-45,61;UBERON:0003075,1.36e-44,82;UBERON:0007284,1.36e-44,82;UBERON:0000956,1.77e-42,25;UBERON:0000203,1.77e-42,25;UBERON:0002346,3.11e-42,86;UBERON:0010371,4.01e-39,104;UBERON:0004121,1.42e-31,171;UBERON:0000924,1.42e-31,171;UBERON:0006601,1.42e-31,171;UBERON:0007023,2.33e-30,114;UBERON:0010314,2.74e-27,132;UBERON:0001872,1.96e-23,5;UBERON:0011216,5.93e-21,223;UBERON:0000369,1.12e-19,4;UBERON:0002435,1.12e-19,4;UBERON:0000204,1.12e-19,4;UBERON:0010082,1.12e-19,4;UBERON:0000200,6.03e-19,6;UBERON:0002021,1.27e-15,5;UBERON:0005383,3.09e-15,3;UBERON:0005382,3.09e-15,3;UBERON:0000025,6.80e-13,192;UBERON:0009663,2.71e-11,7;UBERON:0001873,5.95e-11,2;UBERON:0010122,5.95e-11,2;UBERON:0001871,7.77e-11,6;UBERON:0001897,2.76e-10,2;UBERON:0010225,2.76e-10,2;UBERON:0004111,4.93e-10,240;UBERON:0002771,7.69e-10,2;UBERON:0004732,6.30e-09,13;UBERON:0002420,8.49e-09,9;UBERON:0000125,8.49e-09,9;UBERON:0007245,8.49e-09,9;UBERON:0002308,8.49e-09,9;UBERON:0010009,8.49e-09,9;UBERON:0010011,8.49e-09,9;UBERON:0000454,8.49e-09,9;UBERON:0000483,8.67e-09,306;UBERON:0000119,1.23e-08,309;UBERON:0002037,5.16e-08,6;UBERON:0006215,5.16e-08,6;UBERON:0001870,4.21e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,4.69045542936177,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.6179558283122,1.99613798001194,0,0,0,0,0.254253650292766,0.236387681767936,4.82640722538051,0,0,5.31444831488303,3.37670028151142,6.10326945268333,6.19243855614858,2.65992857058193,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0.802577647298789,4.2167600230561,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,3.16373037092745,0,0,2.84898581801454,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,2.30848315300494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,1.8778639605975,0,1.10929051536852,0.869349641179368,0,0,0,0.285465333544967,0,1.40500471742064,3.62302571527063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,3.08300280463006,1.41696576325585,0.957803154342908,2.66651273512982,10.0828678488687,3.38870537074668,2.26065903884592,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,3.24180406168294,2.34323429584154,2.27355476151302,2.28296916698065,6.01672289920042,0.548257766857182,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.475788130837822,2.63091094251396,0.118193840883968,0,0,2.35673384874003,0,0.913158720509496,0,0,2.93053831124291,0,0,0,0,0,0,0,3.01159151174194,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.588925401344836,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0.430018749454354,0,2.85564258801842,6.10890966476528,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,4.1458471972939,1.13776295448085,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,4.69045542936177,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.6179558283122,1.99613798001194,0,0,0,0,0.254253650292766,0.236387681767936,4.82640722538051,0,0,5.31444831488303,3.37670028151142,6.10326945268333,6.19243855614858,2.65992857058193,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0.802577647298789,4.2167600230561,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,3.16373037092745,0,0,2.84898581801454,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,2.30848315300494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,1.8778639605975,0,1.10929051536852,0.869349641179368,0,0,0,0.285465333544967,0,1.40500471742064,3.62302571527063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,3.08300280463006,1.41696576325585,0.957803154342908,2.66651273512982,10.0828678488687,3.38870537074668,2.26065903884592,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,3.24180406168294,2.34323429584154,2.27355476151302,2.28296916698065,6.01672289920042,0.548257766857182,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.475788130837822,2.63091094251396,0.118193840883968,0,0,2.35673384874003,0,0.913158720509496,0,0,2.93053831124291,0,0,0,0,0,0,0,3.01159151174194,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.588925401344836,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0.430018749454354,0,2.85564258801842,6.10890966476528,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,4.1458471972939,1.13776295448085,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@GPR12 | |||
}} | }} |
Latest revision as of 22:38, 16 September 2015
Short description: | p2@GPR12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR12_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -206bp_to_ENST00000405846, NM_005288, uc010aal.2, uc010tdl.1_5end |
EntrezGene: | GPR12 |
HGNC: | 4466 |
UniProt: | P47775A8K2F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.29e-10 | 2 |