FFCP PHASE1:Hg19::chr6:31895335..31895346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=717 | |EntrezGene=717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1248 | |HGNC=1248 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3N2 | |UniProt=F2Z3N2 | ||
|association_with_transcript=33bp_to_ENST00000447952_5end | |association_with_transcript=33bp_to_ENST00000447952_5end | ||
|cluster_id=chr6:31895335..31895346,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_C2_5end | |description=CAGE_peak_6_at_C2_5end | ||
|id=chr6:31895335..31895346,+ | |id=chr6:31895335..31895346,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.34e-31!12;CL:0000417!1.34e-31!12;CL:0000668!1.34e-31!12;CL:0000414!1.34e-31!12;CL:0000412!1.34e-31!12;CL:0000182!1.34e-31!12;CL:0000319!1.19e-11!1;CL:0002563!2.92e-11!4;CL:0000223!1.48e-10!59 | |ontology_enrichment_celltype=CL:0000181!1.34e-31!12;CL:0000417!1.34e-31!12;CL:0000668!1.34e-31!12;CL:0000414!1.34e-31!12;CL:0000412!1.34e-31!12;CL:0000182!1.34e-31!12;CL:0000319!1.19e-11!1;CL:0002563!2.92e-11!4;CL:0000223!1.48e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-53;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.37e-53,12;CL:0000223,4.54e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.54e-41;11!UBERON:0009497;1.43e-34;13!UBERON:0001041;2.14e-21;30!UBERON:0003104;1.36e-14;31!CL:0000223;2.39e-08;58 | |||
|ontology_enrichment_disease=DOID:3030!1.19e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.28e-35!19;UBERON:0006925!4.28e-35!19;UBERON:0008836!4.28e-35!19;UBERON:0005057!6.15e-32!26;UBERON:0008835!3.35e-30!22;UBERON:0003894!3.35e-30!22;UBERON:0009854!7.46e-29!23;UBERON:0007499!1.76e-26!25;UBERON:0009497!1.76e-26!25;UBERON:0000015!1.76e-26!25;UBERON:0002423!1.76e-26!25;UBERON:0006235!1.76e-26!25;UBERON:0004161!1.76e-26!25;UBERON:0009856!1.98e-25!26;UBERON:0002365!3.42e-21!31;UBERON:0002330!3.42e-21!31;UBERON:0002368!1.14e-18!35;UBERON:0003929!2.74e-18!54;UBERON:0005172!6.97e-18!55;UBERON:0005173!6.97e-18!55;UBERON:0005911!7.93e-17!82;UBERON:0002417!5.43e-16!61;UBERON:0000916!5.43e-16!61;UBERON:0000949!2.54e-14!45;UBERON:0005177!1.87e-12!107;UBERON:0002171!7.76e-12!1;UBERON:0006518!7.76e-12!1;UBERON:0008949!7.76e-12!1;UBERON:0000101!7.76e-12!1;UBERON:0002167!7.76e-12!1;UBERON:0004921!8.73e-12!129;UBERON:0004185!8.73e-12!129;UBERON:0009569!1.07e-11!113;UBERON:0001301!1.47e-11!1;UBERON:0001041!1.67e-11!98;UBERON:0001242!2.92e-11!4;UBERON:0001262!2.92e-11!4;UBERON:0004786!2.92e-11!4;UBERON:0004808!2.92e-11!4;UBERON:0001277!2.92e-11!4;UBERON:0002530!1.06e-10!59;UBERON:0000466!2.64e-10!126;UBERON:0000077!6.28e-10!130;UBERON:0001007!1.72e-09!155;UBERON:0001555!1.72e-09!155;UBERON:0007026!1.72e-09!155;UBERON:0003350!3.44e-09!5;UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-60;19!UBERON:0006925;4.84e-60;19!UBERON:0002423;1.35e-45;25!UBERON:0002365;2.54e-35;31!UBERON:0002330;2.54e-35;31!UBERON:0002368;3.64e-31;33!UBERON:0000949;9.41e-23;43!UBERON:0002171;4.69e-19;1!UBERON:0006518;4.69e-19;1!UBERON:0008949;4.69e-19;1!UBERON:0000101;4.69e-19;1!UBERON:0002167;4.69e-19;1!UBERON:0005172;1.34e-13;52!UBERON:0005173;1.34e-13;52!UBERON:0002417;6.30e-12;58!UBERON:0000916;6.30e-12;58!UBERON:0002530;8.65e-12;57!UBERON:0001007;2.39e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.48e-60,19;UBERON:0006925,4.48e-60,19;UBERON:0008836,4.48e-60,19;UBERON:0008835,7.26e-52,22;UBERON:0003894,7.26e-52,22;UBERON:0009854,1.33e-49,23;UBERON:0007499,1.27e-45,25;UBERON:0009497,1.27e-45,25;UBERON:0000015,1.27e-45,25;UBERON:0002423,1.27e-45,25;UBERON:0006235,1.27e-45,25;UBERON:0004161,1.27e-45,25;UBERON:0009856,7.35e-44,26;UBERON:0002365,9.40e-37,31;UBERON:0002330,9.40e-37,31;UBERON:0002368,1.59e-32,35;UBERON:0000949,3.10e-25,45;UBERON:0003929,5.65e-21,54;UBERON:0005172,5.65e-21,54;UBERON:0005173,5.65e-21,54;UBERON:0002530,3.63e-19,59;UBERON:0002171,5.62e-19,1;UBERON:0006518,5.62e-19,1;UBERON:0008949,5.62e-19,1;UBERON:0000101,5.62e-19,1;UBERON:0002167,5.62e-19,1;UBERON:0002417,7.69e-19,60;UBERON:0000916,7.69e-19,60;UBERON:0005911,2.91e-17,82;UBERON:0001041,3.06e-16,87;UBERON:0005177,6.49e-14,101;UBERON:0009569,1.72e-12,112;UBERON:0004921,1.01e-11,118;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0003914,1.95e-09,117;UBERON:0005256,5.01e-09,122;UBERON:0001048,1.50e-08,160;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0000490,2.44e-07,148;UBERON:0000025,5.76e-07,192;UBERON:0003104,9.61e-07,160;UBERON:0009142,9.61e-07,160;UBERON:0002100,9.84e-07,199 | |||
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|short_description=p6@C2 | |short_description=p6@C2 | ||
}} | }} |
Latest revision as of 00:53, 18 September 2015
Short description: | p6@C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_ENST00000447952_5end |
EntrezGene: | C2 |
HGNC: | 1248 |
UniProt: | F2Z3N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.37e-53 | 12 |
endodermal cell | 4.54e-11 | 58 |