FFCP PHASE1:Hg19::chr13:110652808..110652820,+: Difference between revisions
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|id=chr13:110652808..110652820,+
|short_description=p@chr13:110652808..110652820,+
|description=CAGE_peak_at_chr13:110652808..110652820,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:110652808..110652820,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:110652808..110652820,+ | |||
|id=chr13:110652808..110652820,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.56e-27!3;CL:0002537!4.61e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000349;1.39e-19;19!CL:0002537;3.22e-09;5!CL:0000197;6.78e-08;6!CL:0000098;6.78e-08;6!CL:0002167;6.78e-08;6!CL:0000134;4.51e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000349,1.31e-19,19;CL:0002537,2.97e-09,5;CL:0000197,7.25e-08,6;CL:0000098,7.25e-08,6;CL:0002167,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.21e-40;1!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease=DOID:5093!6.93e-10!4;DOID:1612!6.93e-10!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.76e-39!14;UBERON:0000158!2.76e-39!14;UBERON:0003124!1.72e-31!7;UBERON:0000476!3.56e-27!3;UBERON:0000920!3.56e-27!3;UBERON:0000478!1.57e-22!24;UBERON:0000305!6.05e-12!7;UBERON:0004923!3.26e-11!57;UBERON:0004871!1.62e-10!8;UBERON:0001301!5.79e-10!1;UBERON:0001987!7.91e-10!4;UBERON:0004340!7.91e-10!4;UBERON:0007190!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0005631;2.70e-36;10!UBERON:0000158;2.70e-36;10!UBERON:0000478;5.55e-27;24!UBERON:0001987;3.42e-11;4!UBERON:0000305;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-53,3;UBERON:0003124,2.30e-51,7;UBERON:0005631,1.25e-45,14;UBERON:0000158,1.25e-45,14;UBERON:0000478,5.19e-27,24;UBERON:0001987,3.42e-11,4;UBERON:0004340,3.42e-11,4;UBERON:0004923,2.65e-10,66;UBERON:0000305,5.70e-07,7 | |||
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|short_description=p@chr13:110652808..110652820,+ | |||
}} | }} |
Latest revision as of 14:28, 24 July 2015
Short description: | p@chr13:110652808..110652820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110652808..110652820, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-53 | 3 |
extraembryonic cell | 1.31e-19 | 19 |
amnion mesenchymal stem cell | 2.97e-09 | 5 |
receptor cell | 7.25e-08 | 6 |
sensory epithelial cell | 7.25e-08 | 6 |
olfactory epithelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.28e-53 | 3 |
chorion | 2.30e-51 | 7 |
extraembryonic membrane | 1.25e-45 | 14 |
membranous layer | 1.25e-45 | 14 |
extraembryonic structure | 5.19e-27 | 24 |
placenta | 3.42e-11 | 4 |
allantois | 3.42e-11 | 4 |
organ component layer | 2.65e-10 | 66 |
amnion | 5.70e-07 | 7 |