FFCP PHASE1:Hg19::chr20:21378152..21378169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644524 | |EntrezGene=644524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7837 | |HGNC=7837 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2Z4 | |UniProt=Q9H2Z4 | ||
|association_with_transcript=-105bp_to_NM_033176,uc010gcz.2_5end | |association_with_transcript=-105bp_to_NM_033176,uc010gcz.2_5end | ||
|cluster_id=chr20:21378152..21378169,- | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_1_at_NKX2-4_5end | |description=CAGE_peak_1_at_NKX2-4_5end | ||
|id=chr20:21378152..21378169,- | |id=chr20:21378152..21378169,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.34e-09;2!CL:0000242;4.34e-09;2!CL:0002535;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.34e-09,2;CL:0002535,4.70e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.68e-07;10!UBERON:0007687;5.68e-07;10 | |||
|ontology_enrichment_disease=DOID:162!3.68e-13!235;DOID:14566!9.52e-13!239;DOID:0050687!2.44e-11!143 | |ontology_enrichment_disease=DOID:162!3.68e-13!235;DOID:14566!9.52e-13!239;DOID:0050687!2.44e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:4362;2.09e-13;5!DOID:3193;3.71e-09;2!DOID:962;3.71e-09;2!DOID:4468;7.79e-09;2!DOID:171;4.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.97e-13,5;DOID:3193,3.71e-09,2;DOID:962,3.71e-09,2;DOID:4468,7.49e-09,2;DOID:171,4.39e-07,10;DOID:162,8.64e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.22e-09!8;UBERON:0003135!4.95e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;2.49e-11;6!UBERON:0001560;2.49e-11;6!UBERON:0003714;3.71e-09;2!UBERON:0006955;5.08e-09;2!UBERON:0004801;5.08e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,2.36e-11,6;UBERON:0001560,2.36e-11,6;UBERON:0003714,3.71e-09,2;UBERON:0006955,4.70e-09,2;UBERON:0004801,4.70e-09,2 | |||
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|short_description=p1@NKX2-4 | |short_description=p1@NKX2-4 | ||
}} | }} |
Latest revision as of 18:02, 24 September 2015
Short description: | p1@NKX2-4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-4_5end |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | -105bp_to_NM_033176, uc010gcz.2_5end |
EntrezGene: | NKX2-4 |
HGNC: | 7837 |
UniProt: | Q9H2Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.34e-09 | 2 |
epithelial cell of cervix | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 2.36e-11 | 6 |
neck of organ | 2.36e-11 | 6 |
neural tissue | 3.71e-09 | 2 |
uterine epithelium | 4.70e-09 | 2 |
cervix epithelium | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.97e-13 | 5 |
peripheral nerve sheath neoplasm | 3.71e-09 | 2 |
neurofibroma | 3.71e-09 | 2 |
clear cell adenocarcinoma | 7.49e-09 | 2 |
neuroectodermal tumor | 4.39e-07 | 10 |
cancer | 8.64e-07 | 235 |