FFCP PHASE1:Hg19::chr6:142623784..142623795,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57211 | |EntrezGene=57211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13841 | |HGNC=13841 | ||
|TSSclassifier=strong | |||
|UniProt=F5H054 | |UniProt=F5H054 | ||
|association_with_transcript=21bp_to_ENST00000435011,ENST00000545477_5end | |association_with_transcript=21bp_to_ENST00000435011,ENST00000545477_5end | ||
|cluster_id=chr6:142623784..142623795,+ | |||
|coexpression_cluster_id=C4569 | |||
|description=CAGE_peak_5_at_GPR126_5end | |description=CAGE_peak_5_at_GPR126_5end | ||
|id=chr6:142623784..142623795,+ | |id=chr6:142623784..142623795,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.66e-28!254;CL:0000223!7.31e-14!59;CL:0000077!1.73e-11!19;CL:0000076!2.73e-11!62;CL:0002076!1.19e-08!43 | |ontology_enrichment_celltype=CL:0000066!4.66e-28!254;CL:0000223!7.31e-14!59;CL:0000077!1.73e-11!19;CL:0000076!2.73e-11!62;CL:0002076!1.19e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.26e-20;19!CL:0000182;1.55e-08;12!CL:0002097;2.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.41e-20,19;CL:0000066,2.14e-18,253;CL:0000076,7.43e-14,63;CL:0000223,2.80e-09,58;CL:0000182,1.52e-08,12;CL:0002097,2.69e-07,2;CL:0000213,6.16e-07,58;CL:0000215,6.16e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.64e-22!106;DOID:0050687!5.98e-19!143;DOID:162!3.13e-11!235;DOID:14566!1.61e-10!239;DOID:1749!4.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-09;14!DOID:170;1.86e-08;6!DOID:7;3.34e-07;39!DOID:4074;5.58e-07;2!DOID:4905;5.58e-07;2!DOID:3498;5.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.42e-16,106;DOID:0050687,3.56e-13,143;DOID:162,8.86e-13,235;DOID:14566,2.68e-12,239;DOID:1749,2.03e-09,14;DOID:170,2.31e-08,6;DOID:7,3.64e-07,39;DOID:4074,6.49e-07,2;DOID:4905,6.49e-07,2;DOID:3498,6.49e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.46e-22!169;UBERON:0000925!1.46e-22!169;UBERON:0006595!1.46e-22!169;UBERON:0000077!1.30e-21!130;UBERON:0004921!4.86e-20!129;UBERON:0004185!4.86e-20!129;UBERON:0001007!2.25e-19!155;UBERON:0001555!2.25e-19!155;UBERON:0007026!2.25e-19!155;UBERON:0005911!1.51e-16!82;UBERON:0001041!2.94e-16!98;UBERON:0000065!1.27e-11!53;UBERON:0003929!2.26e-11!54;UBERON:0001004!3.81e-11!72;UBERON:0005177!5.65e-11!107;UBERON:0005157!1.42e-10!51;UBERON:0002530!3.15e-10!59;UBERON:0000466!1.28e-09!126;UBERON:0005153!2.38e-09!37;UBERON:0003104!5.31e-09!238;UBERON:0009142!5.31e-09!238;UBERON:0000072!1.04e-07!46;UBERON:0007499!1.09e-07!25;UBERON:0000161!1.67e-07!35;UBERON:0009497!1.92e-07!25;UBERON:0000015!1.92e-07!25;UBERON:0002423!1.92e-07!25;UBERON:0006235!1.92e-07!25;UBERON:0004161!1.92e-07!25;UBERON:0009569!1.99e-07!113;UBERON:0009856!3.22e-07!26;UBERON:0008947!4.58e-07!38;UBERON:0003258!4.58e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.46e-10;3!UBERON:0001235;2.46e-10;3!UBERON:0006858;2.46e-10;3!UBERON:0000949;3.45e-08;43!UBERON:0002368;4.18e-08;33!UBERON:0002107;7.49e-07;19!UBERON:0006925;7.49e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,8.65e-11,82;UBERON:0002369,3.16e-10,3;UBERON:0001235,3.16e-10,3;UBERON:0006858,3.16e-10,3;UBERON:0004119,7.05e-10,160;UBERON:0000925,7.05e-10,160;UBERON:0006595,7.05e-10,160;UBERON:0002530,2.62e-09,59;UBERON:0004921,1.78e-08,118;UBERON:0000949,1.81e-08,45;UBERON:0002368,2.83e-08,35;UBERON:0003929,8.62e-08,54;UBERON:0008835,1.55e-07,22;UBERON:0003894,1.55e-07,22;UBERON:0009854,3.79e-07,23;UBERON:0002107,7.07e-07,19;UBERON:0006925,7.07e-07,19;UBERON:0008836,7.07e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.77883131343355,0.33472061276467,0,0,0,0,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.474541238222193,0,0.196221465125346,0.38474715694639,0,0,0,0,8.87285243752816,2.94848165003288,3.54473944008842,0,3.68965315629341,0,0.439001141634502,0,0.301586917234893,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,2.65890789101569,1.80455823272956,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.4875642382488,0.192190067365106,2.29702882490251,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0,0,8.09636686680301,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.09714191347956,0,0.568272293612826,0.23874448473769,2.37571744666111,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,2.78591888556713,0.179021174675609,0,0.493217028184668,0,0,0,0,0,2.3438498497671,0.262379999988587,0,0.682760689712998,0.254253650292766,2.83665218121524,0,0,0,0,0,0,0,0,0.219385397153973,0.653630781113941,2.50962739701486,0.230850775511391,0,0,0,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.706765357169704,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,1.17398771359254,5.09838797021595,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,1.42304773014896,0,0,1.27390116638691,1.04471047896483,0,0,0.677294319023596,0.803982487948041,0.410577285266046,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0.400794101257669,0.213452994739353,0,0.432271251462318,4.46692725047071,0,0.576219191952599,0,5.42096279618629,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,2.59984501613838,1.07140615895516,2.62873821031321,0.492137407573744,0,0,0,0,0,0,0,2.32140586367385,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,1.53532157855556,0,0,0,0,0,0,1.19730191562487,0,12.0975495467649,0.339936274560377,2.78449243988357,0,0,0,0.684347351537318,0,0.213574825135389,3.61569901729232,0.414239055347196,0,0,0.243585196761792,5.74507131993164,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0,0.0620964029413835,0,0.249960815924213,0.606596470166591,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,9.64987161187166,1.30497145982606,1.36023555307363,1.15761237161917,3.67105056759701,1.07453304648892,16.6752781466925,2.85069264452319,0.530067437837643,9.066959798733,8.61606447330671,0.256241518587947,5.87231580943038,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,4.38997531371285,0,0,0,0.0752103283492573,0,0,0.261906694481422,2.78412259767164,0.295712172434091,0,0,0,0,0,1.64477330057155,0.496211178389294,0,3.19406069098988,0,0,0,0,17.3856645518772,0,0,0.0679697329768317,0,7.56440581657396,3.78186766433035,0.470958557103084,0,4.48435461302062,0,0.215927591218621,0,0,0,2.09234565662625,0,0,0.414432328326074,0.17071847709395,0,0.860454717640555,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,3.39252483350749,0,0.882655033580851,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,2.005660314339,0,0.267964130156178,0,0,1.0661699095049,0.23806443146374,0.0645889098360061,0.496597714366863,0.224263725161227,0,0.202117188958219,0.653150243690884,1.02669990325584,0.606168477131288,0.430333232356058,0.332660356546013,1.62806537221949,1.92109222579888,0,0.0898252021065869,4.69281884806909,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.77883131343355,0.33472061276467,0,0,0,0,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.474541238222193,0,0.196221465125346,0.38474715694639,0,0,0,0,8.87285243752816,2.94848165003288,3.54473944008842,0,3.68965315629341,0,0.439001141634502,0,0.301586917234893,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,2.65890789101569,1.80455823272956,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.4875642382488,0.192190067365106,2.29702882490251,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0,0,8.09636686680301,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.09714191347956,0,0.568272293612826,0.23874448473769,2.37571744666111,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,2.78591888556713,0.179021174675609,0,0.493217028184668,0,0,0,0,0,2.3438498497671,0.262379999988587,0,0.682760689712998,0.254253650292766,2.83665218121524,0,0,0,0,0,0,0,0,0.219385397153973,0.653630781113941,2.50962739701486,0.230850775511391,0,0,0,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.706765357169704,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,1.17398771359254,5.09838797021595,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,1.42304773014896,0,0,1.27390116638691,1.04471047896483,0,0,0.677294319023596,0.803982487948041,0.410577285266046,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0.400794101257669,0.213452994739353,0,0.432271251462318,4.46692725047071,0,0.576219191952599,0,5.42096279618629,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,2.59984501613838,1.07140615895516,2.62873821031321,0.492137407573744,0,0,0,0,0,0,0,2.32140586367385,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,1.53532157855556,0,0,0,0,0,0,1.19730191562487,0,12.0975495467649,0.339936274560377,2.78449243988357,0,0,0,0.684347351537318,0,0.213574825135389,3.61569901729232,0.414239055347196,0,0,0.243585196761792,5.74507131993164,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0,0.0620964029413835,0,0.249960815924213,0.606596470166591,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,9.64987161187166,1.30497145982606,1.36023555307363,1.15761237161917,3.67105056759701,1.07453304648892,16.6752781466925,2.85069264452319,0.530067437837643,9.066959798733,8.61606447330671,0.256241518587947,5.87231580943038,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,4.38997531371285,0,0,0,0.0752103283492573,0,0,0.261906694481422,2.78412259767164,0.295712172434091,0,0,0,0,0,1.64477330057155,0.496211178389294,0,3.19406069098988,0,0,0,0,17.3856645518772,0,0,0.0679697329768317,0,7.56440581657396,3.78186766433035,0.470958557103084,0,4.48435461302062,0,0.215927591218621,0,0,0,2.09234565662625,0,0,0.414432328326074,0.17071847709395,0,0.860454717640555,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,3.39252483350749,0,0.882655033580851,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,2.005660314339,0,0.267964130156178,0,0,1.0661699095049,0.23806443146374,0.0645889098360061,0.496597714366863,0.224263725161227,0,0.202117188958219,0.653150243690884,1.02669990325584,0.606168477131288,0.430333232356058,0.332660356546013,1.62806537221949,1.92109222579888,0,0.0898252021065869,4.69281884806909,0,0,0.665756774185513,0,0 | ||
|short_description=p5@GPR126 | |short_description=p5@GPR126 | ||
}} | }} |
Latest revision as of 07:31, 25 September 2015
Short description: | p5@GPR126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR126_5end |
Coexpression cluster: | C4569_placenta_mesothelioma_liposarcoma_rectal_prostate_Intestinal_adrenal |
Association with transcript: | 21bp_to_ENST00000435011, ENST00000545477_5end |
EntrezGene: | GPR126 |
HGNC: | 13841 |
UniProt: | F5H054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.41e-20 | 19 |
epithelial cell | 2.14e-18 | 253 |
squamous epithelial cell | 7.43e-14 | 63 |
endodermal cell | 2.80e-09 | 58 |
hepatocyte | 1.52e-08 | 12 |
cortical cell of adrenal gland | 2.69e-07 | 2 |
lining cell | 6.16e-07 | 58 |
barrier cell | 6.16e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 8.65e-11 | 82 |
adrenal gland | 3.16e-10 | 3 |
adrenal cortex | 3.16e-10 | 3 |
adrenal/interrenal gland | 3.16e-10 | 3 |
endoderm-derived structure | 7.05e-10 | 160 |
endoderm | 7.05e-10 | 160 |
presumptive endoderm | 7.05e-10 | 160 |
gland | 2.62e-09 | 59 |
subdivision of digestive tract | 1.78e-08 | 118 |
endocrine system | 1.81e-08 | 45 |
endocrine gland | 2.83e-08 | 35 |
gut epithelium | 8.62e-08 | 54 |
hepatic diverticulum | 1.55e-07 | 22 |
liver primordium | 1.55e-07 | 22 |
digestive tract diverticulum | 3.79e-07 | 23 |
liver | 7.07e-07 | 19 |
digestive gland | 7.07e-07 | 19 |
liver bud | 7.07e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.42e-16 | 106 |
cell type cancer | 3.56e-13 | 143 |
cancer | 8.86e-13 | 235 |
disease of cellular proliferation | 2.68e-12 | 239 |
squamous cell carcinoma | 2.03e-09 | 14 |
endocrine gland cancer | 2.31e-08 | 6 |
disease of anatomical entity | 3.64e-07 | 39 |
pancreas adenocarcinoma | 6.49e-07 | 2 |
pancreatic carcinoma | 6.49e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.49e-07 | 2 |