FFCP PHASE1:Hg19::chr6:138820515..138820531,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000479393_5end | |association_with_transcript=-10bp_to_ENST00000479393_5end | ||
|cluster_id=chr6:138820515..138820531,- | |||
|description=CAGE_peak_8_at_NHSL1_5end | |description=CAGE_peak_8_at_NHSL1_5end | ||
|id=chr6:138820515..138820531,- | |id=chr6:138820515..138820531,- | ||
|ontology_enrichment_celltype=CL:0000223!3.44e-08!59 | |ontology_enrichment_celltype=CL:0000223!3.44e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.80e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.15e-13,12;CL:0000223,3.04e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;7.47e-14;13!UBERON:0004161;3.09e-13;11!UBERON:0003104;1.75e-10;31!UBERON:0001041;7.40e-08;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.08e-12;25!UBERON:0002107;1.22e-11;19!UBERON:0006925;1.22e-11;19!UBERON:0005409;3.35e-11;22!UBERON:0002365;3.58e-10;31!UBERON:0002330;3.58e-10;31!UBERON:0000160;5.49e-10;17!UBERON:0002368;1.23e-07;33!UBERON:0004921;6.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.45e-12,25;UBERON:0000015,7.45e-12,25;UBERON:0002423,7.45e-12,25;UBERON:0006235,7.45e-12,25;UBERON:0004161,7.45e-12,25;UBERON:0008835,8.66e-12,22;UBERON:0003894,8.66e-12,22;UBERON:0002107,1.26e-11,19;UBERON:0006925,1.26e-11,19;UBERON:0008836,1.26e-11,19;UBERON:0009854,3.65e-11,23;UBERON:0002365,1.37e-10,31;UBERON:0002330,1.37e-10,31;UBERON:0007499,4.56e-10,25;UBERON:0000160,4.62e-10,17;UBERON:0004921,7.24e-10,118;UBERON:0005409,1.08e-09,25;UBERON:0009856,1.39e-09,26;UBERON:0002368,8.40e-08,35;UBERON:0001007,2.25e-07,145;UBERON:0001555,2.25e-07,145;UBERON:0007026,2.25e-07,145;UBERON:0003929,8.43e-07,54;UBERON:0002530,9.78e-07,59 | |||
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| ||
|short_description=p8@NHSL1 | |short_description=p8@NHSL1 | ||
}} | }} |
Latest revision as of 05:00, 25 September 2015
Short description: | p8@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NHSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000479393_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.15e-13 | 12 |
endodermal cell | 3.04e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 7.45e-12 | 25 |
anatomical boundary | 7.45e-12 | 25 |
hepatobiliary system | 7.45e-12 | 25 |
foregut-midgut junction | 7.45e-12 | 25 |
septum transversum | 7.45e-12 | 25 |
hepatic diverticulum | 8.66e-12 | 22 |
liver primordium | 8.66e-12 | 22 |
liver | 1.26e-11 | 19 |
digestive gland | 1.26e-11 | 19 |
liver bud | 1.26e-11 | 19 |
digestive tract diverticulum | 3.65e-11 | 23 |
exocrine gland | 1.37e-10 | 31 |
exocrine system | 1.37e-10 | 31 |
epithelial sac | 4.56e-10 | 25 |
intestine | 4.62e-10 | 17 |
subdivision of digestive tract | 7.24e-10 | 118 |
gastrointestinal system | 1.08e-09 | 25 |
sac | 1.39e-09 | 26 |
endocrine gland | 8.40e-08 | 35 |
digestive system | 2.25e-07 | 145 |
digestive tract | 2.25e-07 | 145 |
primitive gut | 2.25e-07 | 145 |
gut epithelium | 8.43e-07 | 54 |
gland | 9.78e-07 | 59 |