FFCP PHASE1:Hg19::chr5:30104176..30104187,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:30104176..30104187,- | |||
|coexpression_cluster_id=C2694 | |||
|description=CAGE_peak_at_chr5:30104176..30104187,- | |description=CAGE_peak_at_chr5:30104176..30104187,- | ||
|id=chr5:30104176..30104187,- | |id=chr5:30104176..30104187,- | ||
|ontology_enrichment_celltype=CL:0002564!2.83e-16!3;CL:0002602!1.64e-11!2;CL:0002549!3.33e-11!2;CL:0002590!8.80e-08!3;CL:0000708!1.11e-07!3;CL:0002603!1.35e-07!3;CL:0002592!2.66e-07!3;CL:0002150!4.54e-07!3;CL:0000861!4.54e-07!3 | |ontology_enrichment_celltype=CL:0002564!2.83e-16!3;CL:0002602!1.64e-11!2;CL:0002549!3.33e-11!2;CL:0002590!8.80e-08!3;CL:0000708!1.11e-07!3;CL:0002603!1.35e-07!3;CL:0002592!2.66e-07!3;CL:0002150!4.54e-07!3;CL:0000861!4.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002564;4.94e-60;3!CL:0002602;6.63e-41;2!CL:0002549;3.89e-11;2!CL:0002590;5.18e-08;3!CL:0000708;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.46e-60,3;CL:0002602,5.99e-41,2;CL:0002549,3.70e-11,2;CL:0002590,5.18e-08,3;CL:0000708,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;3.89e-11;2!DOID:1907;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,4.09e-11,2;DOID:1907,4.09e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0011135;4.21e-99;5!UBERON:0002216;4.21e-99;5!UBERON:0011134;4.21e-99;5!UBERON:0002209;4.21e-99;5!UBERON:0002213;4.21e-99;5!UBERON:0007844;4.21e-99;5!UBERON:0011138;4.21e-99;5!UBERON:0001130;4.21e-99;5!UBERON:0001066;4.21e-99;5!UBERON:0001468;4.21e-99;5!UBERON:0004905;3.87e-62;8!UBERON:0000982;3.87e-62;8!UBERON:0004770;3.87e-62;8!UBERON:0002242;4.94e-60;3!UBERON:0006444;6.63e-41;2!UBERON:0001995;6.63e-41;2!UBERON:0004715;6.63e-41;2!UBERON:0000075;2.86e-31;16!UBERON:0002418;1.14e-27;3!UBERON:0004755;1.14e-27;3!UBERON:0004765;2.37e-19;26!UBERON:0005284;7.82e-17;5!UBERON:0005629;3.89e-11;2!UBERON:0005358;3.89e-11;2!UBERON:0001886;3.89e-11;2!UBERON:0004086;3.89e-11;2!UBERON:0005282;3.89e-11;2!UBERON:0005281;3.89e-11;2!UBERON:0001434;2.04e-09;36!UBERON:0006876;3.56e-08;11!UBERON:0003210;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,4.22e-99,5;UBERON:0002216,4.22e-99,5;UBERON:0011134,4.22e-99,5;UBERON:0002209,4.22e-99,5;UBERON:0002213,4.22e-99,5;UBERON:0005856,4.22e-99,5;UBERON:0005866,4.22e-99,5;UBERON:0005863,4.22e-99,5;UBERON:0007844,4.22e-99,5;UBERON:0011138,4.22e-99,5;UBERON:0001130,4.22e-99,5;UBERON:0001066,4.22e-99,5;UBERON:0001468,4.22e-99,5;UBERON:0004905,3.87e-62,8;UBERON:0000982,3.87e-62,8;UBERON:0004770,3.87e-62,8;UBERON:0002242,5.46e-60,3;UBERON:0003068,5.46e-60,3;UBERON:0002328,5.46e-60,3;UBERON:0004880,5.46e-60,3;UBERON:0006444,5.99e-41,2;UBERON:0001995,5.99e-41,2;UBERON:0004715,5.99e-41,2;UBERON:0000075,2.86e-31,16;UBERON:0002418,1.06e-27,3;UBERON:0004755,1.06e-27,3;UBERON:0005284,7.51e-17,5;UBERON:0011137,1.75e-13,14;UBERON:0005629,3.70e-11,2;UBERON:0005358,3.70e-11,2;UBERON:0001886,3.70e-11,2;UBERON:0004086,3.70e-11,2;UBERON:0005282,3.70e-11,2;UBERON:0005281,3.70e-11,2;UBERON:0006876,3.50e-08,11;UBERON:0003210,6.78e-08,3 | |||
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|short_description=p@chr5:30104176..30104187,- | |short_description=p@chr5:30104176..30104187,- | ||
}} | }} |
Latest revision as of 14:16, 30 July 2015
Short description: | p@chr5:30104176..30104187, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:30104176..30104187, - |
Coexpression cluster: | C2694_Nucleus_Anulus_Smooth_Hep2_Fibroblast_Meningeal_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.46e-60 | 3 |
annulus pulposus cell | 5.99e-41 | 2 |
fibroblast of choroid plexus | 3.70e-11 | 2 |
smooth muscle cell of the brain vasculature | 5.18e-08 | 3 |
leptomeningeal cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 4.09e-11 | 2 |
malignant fibroxanthoma | 4.09e-11 | 2 |