FFCP PHASE1:Hg19::chr5:30104120..30104173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:30104120..30104173,- | |||
|coexpression_cluster_id=C2694 | |||
|description=CAGE_peak_at_chr5:30104120..30104173,- | |description=CAGE_peak_at_chr5:30104120..30104173,- | ||
|id=chr5:30104120..30104173,- | |id=chr5:30104120..30104173,- | ||
|ontology_enrichment_celltype=CL:0000055!9.56e-11!180;CL:0000183!2.84e-09!59;CL:0000188!3.36e-09!9;CL:0000680!1.23e-08!57;CL:0000056!1.23e-08!57;CL:0000355!1.23e-08!57;CL:1000306!1.85e-08!4;CL:0002547!1.85e-08!4;CL:0000187!2.78e-08!54;CL:0002564!4.17e-08!3;CL:0002590!1.18e-07!3;CL:0000708!2.82e-07!3;CL:0000128!3.66e-07!7;CL:0000126!3.66e-07!7;CL:0000127!3.66e-07!7;CL:0002453!3.66e-07!7;CL:0000393!5.23e-07!60;CL:0000211!5.23e-07!60;CL:0002150!6.33e-07!3;CL:0000861!6.33e-07!3;CL:0000548!9.59e-07!679;CL:0000004!9.59e-07!679;CL:0000255!9.59e-07!679 | |ontology_enrichment_celltype=CL:0000055!9.56e-11!180;CL:0000183!2.84e-09!59;CL:0000188!3.36e-09!9;CL:0000680!1.23e-08!57;CL:0000056!1.23e-08!57;CL:0000355!1.23e-08!57;CL:1000306!1.85e-08!4;CL:0002547!1.85e-08!4;CL:0000187!2.78e-08!54;CL:0002564!4.17e-08!3;CL:0002590!1.18e-07!3;CL:0000708!2.82e-07!3;CL:0000128!3.66e-07!7;CL:0000126!3.66e-07!7;CL:0000127!3.66e-07!7;CL:0002453!3.66e-07!7;CL:0000393!5.23e-07!60;CL:0000211!5.23e-07!60;CL:0002150!6.33e-07!3;CL:0000861!6.33e-07!3;CL:0000548!9.59e-07!679;CL:0000004!9.59e-07!679;CL:0000255!9.59e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.21e-13;3!CL:0002590;8.45e-13;3!CL:0002602;1.01e-09;2!CL:0002549;3.20e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.21e-13,3;CL:0002590,8.13e-13,3;CL:0002602,1.01e-09,2;CL:0002549,3.20e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.72e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;9.21e-09;2!DOID:1907;9.21e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,9.77e-09,2;DOID:1907,9.77e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.45e-20!9;UBERON:0005284!1.03e-11!5;UBERON:0002200!1.51e-11!11;UBERON:0006876!1.51e-11!11;UBERON:0001557!2.83e-10!19;UBERON:0000415!1.85e-08!4;UBERON:0007240!1.85e-08!4;UBERON:0005742!1.85e-08!4;UBERON:0005734!1.85e-08!4;UBERON:0004664!1.85e-08!4;UBERON:0004663!1.85e-08!4;UBERON:0002242!4.17e-08!3;UBERON:0003068!4.17e-08!3;UBERON:0002328!4.17e-08!3;UBERON:0004880!4.17e-08!3;UBERON:0001134!9.35e-08!61;UBERON:0002036!9.35e-08!61;UBERON:0003082!9.35e-08!61;UBERON:0002385!2.32e-07!63;UBERON:0001015!2.32e-07!63;UBERON:0000383!2.32e-07!63;UBERON:0003210!2.82e-07!3;UBERON:0004290!6.65e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.34e-36;9!UBERON:0001557;5.34e-36;9!UBERON:0011135;1.27e-21;5!UBERON:0002216;1.27e-21;5!UBERON:0011134;1.27e-21;5!UBERON:0002209;1.27e-21;5!UBERON:0002213;1.27e-21;5!UBERON:0007844;1.27e-21;5!UBERON:0011138;1.27e-21;5!UBERON:0001130;1.27e-21;5!UBERON:0001066;1.27e-21;5!UBERON:0001468;1.27e-21;5!UBERON:0005284;2.76e-20;5!UBERON:0002242;1.21e-13;3!UBERON:0004905;2.21e-13;8!UBERON:0000982;2.21e-13;8!UBERON:0004770;2.21e-13;8!UBERON:0006876;1.59e-12;11!UBERON:0006444;1.01e-09;2!UBERON:0001995;1.01e-09;2!UBERON:0004715;1.01e-09;2!UBERON:0005629;3.20e-09;2!UBERON:0005358;3.20e-09;2!UBERON:0001886;3.20e-09;2!UBERON:0004086;3.20e-09;2!UBERON:0005282;3.20e-09;2!UBERON:0005281;3.20e-09;2!UBERON:0000072;3.34e-07;37!UBERON:0004765;8.04e-07;26!UBERON:0002418;9.96e-07;3!UBERON:0004755;9.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.13e-36,9;UBERON:0011135,1.27e-21,5;UBERON:0002216,1.27e-21,5;UBERON:0011134,1.27e-21,5;UBERON:0002209,1.27e-21,5;UBERON:0002213,1.27e-21,5;UBERON:0005856,1.27e-21,5;UBERON:0005866,1.27e-21,5;UBERON:0005863,1.27e-21,5;UBERON:0007844,1.27e-21,5;UBERON:0011138,1.27e-21,5;UBERON:0001130,1.27e-21,5;UBERON:0001066,1.27e-21,5;UBERON:0001468,1.27e-21,5;UBERON:0005284,2.65e-20,5;UBERON:0001557,3.89e-16,19;UBERON:0002242,1.21e-13,3;UBERON:0003068,1.21e-13,3;UBERON:0002328,1.21e-13,3;UBERON:0004880,1.21e-13,3;UBERON:0004905,2.21e-13,8;UBERON:0000982,2.21e-13,8;UBERON:0004770,2.21e-13,8;UBERON:0006876,1.51e-12,11;UBERON:0006444,1.01e-09,2;UBERON:0001995,1.01e-09,2;UBERON:0004715,1.01e-09,2;UBERON:0005629,3.20e-09,2;UBERON:0005358,3.20e-09,2;UBERON:0001886,3.20e-09,2;UBERON:0004086,3.20e-09,2;UBERON:0005282,3.20e-09,2;UBERON:0005281,3.20e-09,2;UBERON:0008947,3.24e-07,38;UBERON:0003258,3.24e-07,38;UBERON:0002418,9.96e-07,3;UBERON:0004755,9.96e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,87.0077461309128,71.2504357815019,0,0,0,0,2.09305798730539,5.50801866359483,0,0.286235987131057,0.273748850145768,4.14290710662849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.283604451492204,1.55210578223795,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,3.16576279161449,0.397227542439656,0.573673241497627,1.77334191099179,11.7742296029885,0,1.48000529050296,0.622422070799533,0,0.163461903113459,6.05429710579726,14.404398112,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5517364049008,11.1265895451547,11.8095404642906,14.1176285097464,14.1621638660064,10.9144484791104,13.0786368915359,11.9695093726461,10.0034260806062,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,2.7003999674239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,3.81245686774226,0.87192013766656,11.3674343022473,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23024624278115,11.4861935834114,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1148196699299,112.538367238427,48.2851742185529,0,0,0,0,0,0,8.27784570340039,0,3.13427586520895,0,4.89502893656851,0.686286847621712,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94324324491925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.340906509664404,0,0,0,0,0.10115778085555,0,0,0,0,3.19383618190213,0,0,0,7.07100901783368,65.4905409167763,3.24071329670502,0,0,0,0.78494864019923,0.539617372749944,0,0.353437207037059,2.62837226045311,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,1.16107597546902,2.33885814675794,1.23173185579814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.489473409012935,4.11904334487421,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,9.08025525706937,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,9.82631505060581,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,1.55723962648897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,87.0077461309128,71.2504357815019,0,0,0,0,2.09305798730539,5.50801866359483,0,0.286235987131057,0.273748850145768,4.14290710662849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.283604451492204,1.55210578223795,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,3.16576279161449,0.397227542439656,0.573673241497627,1.77334191099179,11.7742296029885,0,1.48000529050296,0.622422070799533,0,0.163461903113459,6.05429710579726,14.404398112,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5517364049008,11.1265895451547,11.8095404642906,14.1176285097464,14.1621638660064,10.9144484791104,13.0786368915359,11.9695093726461,10.0034260806062,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,2.7003999674239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,3.81245686774226,0.87192013766656,11.3674343022473,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23024624278115,11.4861935834114,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1148196699299,112.538367238427,48.2851742185529,0,0,0,0,0,0,8.27784570340039,0,3.13427586520895,0,4.89502893656851,0.686286847621712,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94324324491925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.340906509664404,0,0,0,0,0.10115778085555,0,0,0,0,3.19383618190213,0,0,0,7.07100901783368,65.4905409167763,3.24071329670502,0,0,0,0.78494864019923,0.539617372749944,0,0.353437207037059,2.62837226045311,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,1.16107597546902,2.33885814675794,1.23173185579814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.489473409012935,4.11904334487421,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,9.08025525706937,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,9.82631505060581,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,1.55723962648897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:30104120..30104173,- | |short_description=p@chr5:30104120..30104173,- | ||
}} | }} |
Latest revision as of 14:16, 30 July 2015
Short description: | p@chr5:30104120..30104173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:30104120..30104173, - |
Coexpression cluster: | C2694_Nucleus_Anulus_Smooth_Hep2_Fibroblast_Meningeal_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.21e-13 | 3 |
smooth muscle cell of the brain vasculature | 8.13e-13 | 3 |
annulus pulposus cell | 1.01e-09 | 2 |
fibroblast of choroid plexus | 3.20e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 9.77e-09 | 2 |
malignant fibroxanthoma | 9.77e-09 | 2 |