FFCP PHASE1:Hg19::chr5:180018601..180018622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QR1 | |UniProt=Q96QR1 | ||
|association_with_transcript=-61bp_to_ENST00000292641_5end | |association_with_transcript=-61bp_to_ENST00000292641_5end | ||
|cluster_id=chr5:180018601..180018622,- | |||
|coexpression_cluster_id=C4490 | |||
|description=CAGE_peak_5_at_SCGB3A1_5end | |description=CAGE_peak_5_at_SCGB3A1_5end | ||
|id=chr5:180018601..180018622,- | |id=chr5:180018601..180018622,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000875;6.92e-20;3!CL:0002396;6.92e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,6.94e-20,3;CL:0002396,6.94e-20,3;CL:0002393,5.78e-07,9;CL:0002397,5.78e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.79e-08;1!UBERON:0008801;3.20e-08;1!UBERON:0006242;6.10e-08;1!UBERON:0010227;1.26e-07;1!UBERON:0005425;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.49e-21!115;UBERON:0000153!8.30e-09!129;UBERON:0007811!8.30e-09!129;UBERON:0003887!4.48e-08!21;UBERON:0006555!3.71e-07!17;UBERON:0005103!3.71e-07!17;UBERON:0000083!3.71e-07!17;UBERON:0009201!3.71e-07!17;UBERON:0004819!3.71e-07!17;UBERON:0006553!3.71e-07!17;UBERON:0003074!3.71e-07!17;UBERON:0003060!3.71e-07!17;UBERON:0004876!4.60e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.41e-15;2!UBERON:0003127;1.14e-14;2!UBERON:0000341;7.06e-14;2!UBERON:0000007;7.06e-14;2!UBERON:0001044;6.69e-11;6!UBERON:0003293;6.69e-11;6!UBERON:0003294;6.69e-11;6!UBERON:0010047;6.69e-11;6!UBERON:0003408;6.69e-11;6!UBERON:0000167;6.69e-11;6!UBERON:0002110;1.50e-09;3!UBERON:0001736;2.79e-08;1!UBERON:0001831;3.20e-08;1!UBERON:0001567;3.20e-08;1!UBERON:0002171;4.07e-08;1!UBERON:0006518;4.07e-08;1!UBERON:0008949;4.07e-08;1!UBERON:0000101;4.07e-08;1!UBERON:0002167;4.07e-08;1!UBERON:0001301;6.10e-08;1!UBERON:0002079;1.26e-07;1!UBERON:0000941;1.26e-07;1!UBERON:0001785;1.26e-07;1!UBERON:0002464;1.26e-07;1!UBERON:0004904;1.26e-07;1!UBERON:0001021;1.26e-07;1!UBERON:0003296;2.27e-07;4!UBERON:0010133;2.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.88e-15,2;UBERON:0003127,1.18e-14,2;UBERON:0000341,5.44e-14,2;UBERON:0000007,7.07e-14,2;UBERON:0001044,6.59e-11,6;UBERON:0003293,6.59e-11,6;UBERON:0003294,6.59e-11,6;UBERON:0010047,6.59e-11,6;UBERON:0000167,6.59e-11,6;UBERON:0007023,5.67e-10,114;UBERON:0002110,1.06e-09,3;UBERON:0006242,1.06e-09,3;UBERON:0001736,2.70e-08,1;UBERON:0006298,2.70e-08,1;UBERON:0001831,3.10e-08,1;UBERON:0001567,3.10e-08,1;UBERON:0008801,3.10e-08,1;UBERON:0002171,4.07e-08,1;UBERON:0006518,4.07e-08,1;UBERON:0008949,4.07e-08,1;UBERON:0000101,4.07e-08,1;UBERON:0002167,4.07e-08,1;UBERON:0001301,6.10e-08,1;UBERON:0002079,1.35e-07,1;UBERON:0000941,1.44e-07,1;UBERON:0001785,1.44e-07,1;UBERON:0002464,1.44e-07,1;UBERON:0004904,1.44e-07,1;UBERON:0001021,1.44e-07,1;UBERON:0003902,1.44e-07,1;UBERON:0005425,1.44e-07,1;UBERON:0003296,2.27e-07,4;UBERON:0010133,2.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0,0,0,1.99508920618874,3.58050018958362,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,1.85041349099558,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,1.56869953835371,0,0.105551628892876,0,0.340187410553031,0.215915916102139,6.16909010761157,0,0.501689773854853,0,0,0,0,0,0.769350375349168,0.656029291399411,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,2.98092366383228,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,2.77020930613669,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,1.95551382734803,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,6.72760699176477,0.943225830597996,5.38510771951354,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.138314504928436,0,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,8.77212426971492,0.496211178389294,0,1.78867398695433,0,0.336283722218824,1.82089681270989,2.04895972216168,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.549451649953598,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0,0,0,0,0.339854229375634,0.751871343838829,0.644578879735772,0,0,0,0,0,14.6793370689453,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.530450887527676,0.267964130156178,0,0,1.91910583710883,2.61870874610114,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.684466602170562,0.202056159043763,4.94883217209467,14.6370556880246,0.407016343054873,0,0,0,0,0.244482888365733,0,0,0,0 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| ||
|short_description=p5@SCGB3A1 | |short_description=p5@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:45, 17 September 2015
Short description: | p5@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCGB3A1_5end |
Coexpression cluster: | C4490_trachea_parotid_submaxillary_salivary_throat_aorta_lung |
Association with transcript: | -61bp_to_ENST00000292641_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 6.94e-20 | 3 |
CD14-low, CD16-positive monocyte | 6.94e-20 | 3 |
intermediate monocyte | 5.78e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.88e-15 | 2 |
open tracheal system trachea | 1.18e-14 | 2 |
throat | 5.44e-14 | 2 |
pituitary gland | 7.07e-14 | 2 |
saliva-secreting gland | 6.59e-11 | 6 |
gland of oral region | 6.59e-11 | 6 |
gland of foregut | 6.59e-11 | 6 |
oral gland | 6.59e-11 | 6 |
oral cavity | 6.59e-11 | 6 |
adult organism | 5.67e-10 | 114 |
gallbladder | 1.06e-09 | 3 |
gall bladder primordium | 1.06e-09 | 3 |
submandibular gland | 2.70e-08 | 1 |
submandibular gland primordium | 2.70e-08 | 1 |
parotid gland | 3.10e-08 | 1 |
cheek | 3.10e-08 | 1 |
parotid gland primordium | 3.10e-08 | 1 |
lower lobe of right lung | 4.07e-08 | 1 |
right lung lobe | 4.07e-08 | 1 |
lower lobe of lung | 4.07e-08 | 1 |
lobe of lung | 4.07e-08 | 1 |
right lung | 4.07e-08 | 1 |
epididymis | 6.10e-08 | 1 |
left cardiac atrium | 1.35e-07 | 1 |
cranial nerve II | 1.44e-07 | 1 |
cranial nerve | 1.44e-07 | 1 |
nerve trunk | 1.44e-07 | 1 |
nerve connecting eye with brain | 1.44e-07 | 1 |
nerve | 1.44e-07 | 1 |
retinal neural layer | 1.44e-07 | 1 |
presumptive neural retina | 1.44e-07 | 1 |
gland of diencephalon | 2.27e-07 | 4 |
neuroendocrine gland | 2.27e-07 | 4 |