FFCP PHASE1:Hg19::chr1:26573244..26573248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489882_5end | |association_with_transcript=0bp_to_ENST00000489882_5end | ||
|cluster_id=chr1:26573244..26573248,+ | |||
|description=CAGE_peak_1_at_ENST00000489882_5end | |description=CAGE_peak_1_at_ENST00000489882_5end | ||
|id=chr1:26573244..26573248,+ | |id=chr1:26573244..26573248,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.96e-12;3!CL:0000067;1.96e-12;3!CL:0005012;1.96e-12;3!CL:0002304;1.96e-12;3!CL:0002521;2.31e-12;3!CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4!CL:0002540;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.07e-12,3;CL:0000067,2.07e-12,3;CL:0005012,2.07e-12,3;CL:0002304,2.07e-12,3;CL:0002521,2.31e-12,3;CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4;CL:0002540,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;2.18e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.84e-34,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.95e-13;11!UBERON:0001778;1.96e-12;3!UBERON:0001775;1.96e-12;3!UBERON:0002190;2.31e-12;3!UBERON:0001801;1.85e-10;14!UBERON:0000488;1.17e-09;4!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0000019;5.83e-08;19!UBERON:0000047;5.83e-08;19!UBERON:0004088;5.83e-08;19!UBERON:0010230;5.83e-08;19!UBERON:0002072;6.13e-08;5!UBERON:0000970;1.31e-07;20!UBERON:0002104;2.73e-07;21!UBERON:0001456;2.73e-07;21!UBERON:0002203;7.37e-07;6!UBERON:0001768;7.37e-07;6!UBERON:0002200;7.37e-07;6!UBERON:0000020;9.81e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.10e-13,11;UBERON:0001778,2.07e-12,3;UBERON:0001775,2.07e-12,3;UBERON:0002190,2.31e-12,3;UBERON:0001801,1.90e-10,14;UBERON:0000488,1.22e-09,4;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4;UBERON:0002072,6.13e-08,5;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0001456,5.40e-07,22;UBERON:0002203,7.58e-07,6;UBERON:0001768,7.58e-07,6;UBERON:0002200,7.58e-07,6 | |||
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| ||
|short_description=p1@ENST00000489882 | |short_description=p1@ENST00000489882 | ||
}} | }} |
Latest revision as of 06:33, 28 July 2015
Short description: | p1@ENST00000489882 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000489882_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000489882_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.07e-12 | 3 |
ciliated epithelial cell | 2.07e-12 | 3 |
multi-ciliated epithelial cell | 2.07e-12 | 3 |
non-pigmented ciliary epithelial cell | 2.07e-12 | 3 |
subcutaneous fat cell | 2.31e-12 | 3 |
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
mesenchymal stem cell of the bone marrow | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 5.10e-13 | 11 |
ciliary epithelium | 2.07e-12 | 3 |
ciliary body | 2.07e-12 | 3 |
subcutaneous adipose tissue | 2.31e-12 | 3 |
anterior segment of eyeball | 1.90e-10 | 14 |
atypical epithelium | 1.22e-09 | 4 |
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |
hypodermis | 6.13e-08 | 5 |
camera-type eye | 1.33e-07 | 20 |
simple eye | 1.33e-07 | 20 |
immature eye | 1.33e-07 | 20 |
ocular region | 1.33e-07 | 20 |
eyeball of camera-type eye | 1.33e-07 | 20 |
optic cup | 1.33e-07 | 20 |
optic vesicle | 1.33e-07 | 20 |
eye primordium | 1.33e-07 | 20 |
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
face | 5.40e-07 | 22 |
vasculature of eye | 7.58e-07 | 6 |
uvea | 7.58e-07 | 6 |
vasculature of head | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.84e-34 | 1 |