FFCP PHASE1:Hg19::chr5:135290683..135290694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3950 | |EntrezGene=3950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6550 | |HGNC=6550 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGX8 | |UniProt=D6RGX8 | ||
|association_with_transcript=-12bp_to_ENST00000514447_5end | |association_with_transcript=-12bp_to_ENST00000514447_5end | ||
|cluster_id=chr5:135290683..135290694,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_LECT2_5end | |description=CAGE_peak_3_at_LECT2_5end | ||
|id=chr5:135290683..135290694,- | |id=chr5:135290683..135290694,- | ||
|ontology_enrichment_celltype=CL:0000181!1.23e-15!12;CL:0000417!1.23e-15!12;CL:0000668!1.23e-15!12;CL:0000414!1.23e-15!12;CL:0000412!1.23e-15!12;CL:0000182!1.23e-15!12;CL:0002253!4.09e-11!2 | |ontology_enrichment_celltype=CL:0000181!1.23e-15!12;CL:0000417!1.23e-15!12;CL:0000668!1.23e-15!12;CL:0000414!1.23e-15!12;CL:0000412!1.23e-15!12;CL:0000182!1.23e-15!12;CL:0002253!4.09e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.48e-11;11!UBERON:0009497;1.29e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.19e-26!19;UBERON:0006925!3.19e-26!19;UBERON:0008836!3.19e-26!19;UBERON:0008835!1.10e-22!22;UBERON:0003894!1.10e-22!22;UBERON:0009854!1.04e-21!23;UBERON:0001301!6.31e-21!1;UBERON:0007190!9.43e-21!1;UBERON:0007499!5.39e-20!25;UBERON:0009497!5.39e-20!25;UBERON:0000015!5.39e-20!25;UBERON:0002423!5.39e-20!25;UBERON:0006235!5.39e-20!25;UBERON:0004161!5.39e-20!25;UBERON:0005057!3.10e-19!26;UBERON:0009856!3.10e-19!26;UBERON:0002365!3.62e-16!31;UBERON:0002330!3.62e-16!31;UBERON:0002368!2.43e-14!35;UBERON:0003929!3.72e-13!54;UBERON:0005172!6.33e-13!55;UBERON:0005173!6.33e-13!55;UBERON:0002417!1.20e-11!61;UBERON:0000916!1.20e-11!61;UBERON:0000949!3.47e-11!45;UBERON:0005911!1.25e-08!82;UBERON:0002530!1.49e-08!59;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.50e-37;19!UBERON:0006925;3.50e-37;19!UBERON:0002423;2.13e-28;25!UBERON:0002365;6.22e-23;31!UBERON:0002330;6.22e-23;31!UBERON:0002368;7.84e-20;33!UBERON:0000949;2.25e-14;43!UBERON:0005172;2.30e-10;52!UBERON:0005173;2.30e-10;52!UBERON:0002417;4.98e-08;58!UBERON:0000916;4.98e-08;58!UBERON:0002530;1.42e-07;57!UBERON:0001007;1.92e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.50e-37,19;UBERON:0006925,3.50e-37,19;UBERON:0008836,3.50e-37,19;UBERON:0008835,3.42e-32,22;UBERON:0003894,3.42e-32,22;UBERON:0009854,8.10e-31,23;UBERON:0007499,2.13e-28,25;UBERON:0009497,2.13e-28,25;UBERON:0000015,2.13e-28,25;UBERON:0002423,2.13e-28,25;UBERON:0006235,2.13e-28,25;UBERON:0004161,2.13e-28,25;UBERON:0009856,2.51e-27,26;UBERON:0002365,5.30e-23,31;UBERON:0002330,5.30e-23,31;UBERON:0002368,1.98e-20,35;UBERON:0000949,5.48e-16,45;UBERON:0003929,2.18e-13,54;UBERON:0005172,2.18e-13,54;UBERON:0005173,2.18e-13,54;UBERON:0002530,2.77e-12,59;UBERON:0002417,4.38e-12,60;UBERON:0000916,4.38e-12,60;UBERON:0005911,6.33e-09,82;UBERON:0001041,1.99e-08,87;UBERON:0005177,2.72e-07,101 | |||
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|short_description=p3@LECT2 | |short_description=p3@LECT2 | ||
}} | }} |
Latest revision as of 18:59, 24 September 2015
Short description: | p3@LECT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LECT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -12bp_to_ENST00000514447_5end |
EntrezGene: | LECT2 |
HGNC: | 6550 |
UniProt: | D6RGX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.50e-37 | 19 |
digestive gland | 3.50e-37 | 19 |
liver bud | 3.50e-37 | 19 |
hepatic diverticulum | 3.42e-32 | 22 |
liver primordium | 3.42e-32 | 22 |
digestive tract diverticulum | 8.10e-31 | 23 |
epithelial sac | 2.13e-28 | 25 |
epithelium of foregut-midgut junction | 2.13e-28 | 25 |
anatomical boundary | 2.13e-28 | 25 |
hepatobiliary system | 2.13e-28 | 25 |
foregut-midgut junction | 2.13e-28 | 25 |
septum transversum | 2.13e-28 | 25 |
sac | 2.51e-27 | 26 |
exocrine gland | 5.30e-23 | 31 |
exocrine system | 5.30e-23 | 31 |
endocrine gland | 1.98e-20 | 35 |
endocrine system | 5.48e-16 | 45 |
gut epithelium | 2.18e-13 | 54 |
abdomen element | 2.18e-13 | 54 |
abdominal segment element | 2.18e-13 | 54 |
gland | 2.77e-12 | 59 |
abdominal segment of trunk | 4.38e-12 | 60 |
abdomen | 4.38e-12 | 60 |
endo-epithelium | 6.33e-09 | 82 |
foregut | 1.99e-08 | 87 |
trunk region element | 2.72e-07 | 101 |