FFCP PHASE1:Hg19::chr1:209974525..209974529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209974525..209974529,- | |||
|description=CAGE_peak_at_chr1:209974525..209974529,- | |description=CAGE_peak_at_chr1:209974525..209974529,- | ||
|id=chr1:209974525..209974529,- | |id=chr1:209974525..209974529,- | ||
|ontology_enrichment_celltype=CL:0002076!2.37e-10!43;CL:0002251!4.09e-09!21;CL:0000066!3.04e-08!254;CL:0000223!7.01e-08!59 | |ontology_enrichment_celltype=CL:0002076!2.37e-10!43;CL:0002251!4.09e-09!21;CL:0000066!3.04e-08!254;CL:0000223!7.01e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0001014;9.25e-08;2!CL:0001016;9.25e-08;2!CL:0000047;1.16e-07;2!CL:0002535;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.25e-08,2;CL:0001016,9.25e-08,2;CL:0002535,1.45e-07,2;CL:0000076,9.56e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.18e-13;1!UBERON:0008814;1.16e-07;2!UBERON:0010056;1.16e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!3.74e-16!14;DOID:305!2.20e-07!106 | |ontology_enrichment_disease=DOID:1749!3.74e-16!14;DOID:305!2.20e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.63e-31;14!DOID:3151;1.18e-13;1!DOID:3149;1.18e-13;1!DOID:3451;1.81e-07;2!DOID:4159;1.81e-07;2!DOID:4074;1.81e-07;2!DOID:4905;1.81e-07;2!DOID:0060122;1.81e-07;2!DOID:3498;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.02e-31,14;DOID:3151,2.07e-13,1;DOID:3149,2.07e-13,1;DOID:305,1.82e-08,106;DOID:4074,1.36e-07,2;DOID:4905,1.36e-07,2;DOID:3498,1.36e-07,2;DOID:3451,2.40e-07,2;DOID:4159,2.40e-07,2;DOID:0060122,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.55e-10!12;UBERON:0003729!3.61e-09!5;UBERON:0003343!1.28e-07!4;UBERON:0004785!1.28e-07!4;UBERON:0000002!2.16e-07!6;UBERON:0001560!2.16e-07!6;UBERON:0000974!3.02e-07!10;UBERON:0004119!6.93e-07!169;UBERON:0000925!6.93e-07!169;UBERON:0006595!6.93e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.83e-14;1!UBERON:0005056;4.83e-14;1!UBERON:0004176;4.83e-14;1!UBERON:0002134;1.18e-13;1!UBERON:0000941;1.18e-13;1!UBERON:0001785;1.18e-13;1!UBERON:0002464;1.18e-13;1!UBERON:0004904;1.18e-13;1!UBERON:0001021;1.18e-13;1!UBERON:0005208;1.18e-13;1!UBERON:0004145;1.18e-13;1!UBERON:0005946;1.18e-13;1!UBERON:0005965;1.18e-13;1!UBERON:0002078;1.18e-13;1!UBERON:0003343;1.83e-13;4!UBERON:0004785;1.83e-13;4!UBERON:0000974;2.78e-09;6!UBERON:0006562;1.81e-07;2!UBERON:0003714;1.81e-07;2!UBERON:0005162;1.81e-07;2!UBERON:0000122;1.81e-07;2!UBERON:0002081;1.81e-07;2!UBERON:0002133;1.81e-07;2!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.85e-14,1;UBERON:0005056,5.85e-14,1;UBERON:0002134,9.73e-14,1;UBERON:0005208,9.73e-14,1;UBERON:0005946,9.73e-14,1;UBERON:0005965,9.73e-14,1;UBERON:0002078,9.73e-14,1;UBERON:0000941,1.10e-13,1;UBERON:0001785,1.10e-13,1;UBERON:0002464,1.10e-13,1;UBERON:0004904,1.10e-13,1;UBERON:0001021,1.10e-13,1;UBERON:0003902,1.10e-13,1;UBERON:0005425,1.10e-13,1;UBERON:0003343,1.95e-13,4;UBERON:0004785,1.95e-13,4;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2;UBERON:0002081,1.64e-07,2;UBERON:0002133,1.64e-07,2;UBERON:0010227,1.64e-07,2;UBERON:0003714,1.75e-07,2;UBERON:0005162,1.75e-07,2;UBERON:0000122,1.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.603173834469785,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.716468181622786,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,2.4246415373971,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.975966209950223,0.461701551022782,0,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,1.9566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,2.15583274311631,1.56706571844725,0.52418000472609,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0.674921674654501,6.96421759102155,0,1.0063040627978,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,1.29766695682514,0.366857197043358,2.31051332300676,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,1.14986184875636,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.609589624911347,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0,0,0.452888530700021,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.25458863311266,0,0,0,0.5388164241167,0.286888821570705,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.603173834469785,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.716468181622786,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,2.4246415373971,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.975966209950223,0.461701551022782,0,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,1.9566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,2.15583274311631,1.56706571844725,0.52418000472609,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0.674921674654501,6.96421759102155,0,1.0063040627978,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,1.29766695682514,0.366857197043358,2.31051332300676,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,1.14986184875636,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.609589624911347,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0,0,0.452888530700021,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.25458863311266,0,0,0,0.5388164241167,0.286888821570705,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:209974525..209974529,- | |short_description=p@chr1:209974525..209974529,- | ||
}} | }} |
Latest revision as of 03:27, 28 July 2015
Short description: | p@chr1:209974525..209974529, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209974525..209974529, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.25e-08 | 2 |
immature CD1a-positive Langerhans cell | 9.25e-08 | 2 |
epithelial cell of cervix | 1.45e-07 | 2 |
squamous epithelial cell | 9.56e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.85e-14 | 1 |
external female genitalia | 5.85e-14 | 1 |
tricuspid valve | 9.73e-14 | 1 |
right atrium valve | 9.73e-14 | 1 |
outflow tract of atrium | 9.73e-14 | 1 |
outflow part of right atrium | 9.73e-14 | 1 |
right cardiac atrium | 9.73e-14 | 1 |
cranial nerve II | 1.10e-13 | 1 |
cranial nerve | 1.10e-13 | 1 |
nerve trunk | 1.10e-13 | 1 |
nerve connecting eye with brain | 1.10e-13 | 1 |
nerve | 1.10e-13 | 1 |
retinal neural layer | 1.10e-13 | 1 |
presumptive neural retina | 1.10e-13 | 1 |
mucosa of oral region | 1.95e-13 | 4 |
respiratory system mucosa | 1.95e-13 | 4 |
uterine epithelium | 1.45e-07 | 2 |
cervix epithelium | 1.45e-07 | 2 |
cardiac atrium | 1.64e-07 | 2 |
atrioventricular valve | 1.64e-07 | 2 |
future cardiac atrium | 1.64e-07 | 2 |
neural tissue | 1.75e-07 | 2 |
multi cell component structure | 1.75e-07 | 2 |
neuron projection bundle | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.02e-31 | 14 |
skin squamous cell carcinoma | 2.07e-13 | 1 |
keratoacanthoma | 2.07e-13 | 1 |
carcinoma | 1.82e-08 | 106 |
pancreas adenocarcinoma | 1.36e-07 | 2 |
pancreatic carcinoma | 1.36e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.36e-07 | 2 |
skin carcinoma | 2.40e-07 | 2 |
skin cancer | 2.40e-07 | 2 |
integumentary system cancer | 2.40e-07 | 2 |