FFCP PHASE1:Hg19::chr1:209704648..209704656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209704648..209704656,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr1:209704648..209704656,+ | |description=CAGE_peak_at_chr1:209704648..209704656,+ | ||
|id=chr1:209704648..209704656,+ | |id=chr1:209704648..209704656,+ | ||
|ontology_enrichment_celltype=CL:0000349!6.47e-47!3;CL:0002577!6.47e-47!3;CL:0002536!3.92e-32!2;CL:0002623!2.17e-21!3;CL:0000622!3.03e-13!5;CL:0000154!3.39e-11!6;CL:0000150!9.20e-08!9 | |ontology_enrichment_celltype=CL:0000349!6.47e-47!3;CL:0002577!6.47e-47!3;CL:0002536!3.92e-32!2;CL:0002623!2.17e-21!3;CL:0000622!3.03e-13!5;CL:0000154!3.39e-11!6;CL:0000150!9.20e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.42e-117;3!CL:0002536;1.91e-79;2!CL:0000349;3.17e-52;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.73e-117,3;CL:0002536,1.56e-79,2;CL:0000349,3.17e-52,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.85e-39!14;UBERON:0000158!1.85e-39!14;UBERON:0003124!1.81e-35!7;UBERON:0001987!2.10e-35!4;UBERON:0004340!2.10e-35!4;UBERON:0000478!5.39e-23!24;UBERON:0004923!7.95e-13!57;UBERON:0001044!3.39e-11!6;UBERON:0003293!3.39e-11!6;UBERON:0003294!3.39e-11!6;UBERON:0010047!3.39e-11!6;UBERON:0000167!3.39e-11!6;UBERON:0000305!6.69e-10!7;UBERON:0004871!8.95e-09!8;UBERON:0000995!3.01e-07!21;UBERON:0003408!4.52e-07!10;UBERON:0005795!6.10e-07!22;UBERON:0003975!6.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.64e-88;4!UBERON:0000478;1.51e-41;24!UBERON:0000305;1.21e-23;7!UBERON:0005631;6.66e-17;10!UBERON:0000158;6.66e-17;10!UBERON:0000077;5.54e-14;27!UBERON:0000474;1.88e-08;37!UBERON:0003100;2.81e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.91e-88,4;UBERON:0004340,1.91e-88,4;UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0003124,4.57e-51,7;UBERON:0000478,1.51e-41,24;UBERON:0000305,1.14e-23,7;UBERON:0004871,7.35e-21,8;UBERON:0000995,1.04e-17,21;UBERON:0005795,6.04e-17,22;UBERON:0003975,6.04e-17,22;UBERON:0004923,1.27e-15,66;UBERON:0004175,5.08e-15,25;UBERON:0000077,4.54e-13,29;UBERON:0003134,2.01e-10,37;UBERON:0000474,2.01e-10,37;UBERON:0003100,1.75e-09,41;UBERON:0006554,2.27e-08,47;UBERON:0003133,3.27e-08,48;UBERON:0001008,3.27e-08,48;UBERON:0005156,8.16e-07,59;UBERON:0000990,8.16e-07,59 | |||
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|short_description=p@chr1:209704648..209704656,+ | |short_description=p@chr1:209704648..209704656,+ | ||
}} | }} |
Latest revision as of 03:19, 28 July 2015
Short description: | p@chr1:209704648..209704656, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209704648..209704656, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.73e-117 | 3 |
amniotic epithelial cell | 1.56e-79 | 2 |
extraembryonic cell | 3.17e-52 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.91e-88 | 4 |
allantois | 1.91e-88 | 4 |
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
chorion | 4.57e-51 | 7 |
extraembryonic structure | 1.51e-41 | 24 |
amnion | 1.14e-23 | 7 |
somatic layer of lateral plate mesoderm | 7.35e-21 | 8 |
uterus | 1.04e-17 | 21 |
embryonic uterus | 6.04e-17 | 22 |
internal female genitalia | 6.04e-17 | 22 |
organ component layer | 1.27e-15 | 66 |
internal genitalia | 5.08e-15 | 25 |
mixed endoderm/mesoderm-derived structure | 4.54e-13 | 29 |
female reproductive organ | 2.01e-10 | 37 |
female reproductive system | 2.01e-10 | 37 |
female organism | 1.75e-09 | 41 |
urinary system structure | 2.27e-08 | 47 |
reproductive organ | 3.27e-08 | 48 |
renal system | 3.27e-08 | 48 |
reproductive structure | 8.16e-07 | 59 |
reproductive system | 8.16e-07 | 59 |