FFCP PHASE1:Hg19::chr1:207103060..207103088,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-192bp_to_AK026320_5end | |association_with_transcript=-192bp_to_AK026320_5end | ||
|cluster_id=chr1:207103060..207103088,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_4_at_AK026320_5end | |description=CAGE_peak_4_at_AK026320_5end | ||
|id=chr1:207103060..207103088,- | |id=chr1:207103060..207103088,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.61e-13;1!UBERON:0008801;2.18e-13;1!UBERON:0006242;3.99e-13;1!UBERON:0001045;7.68e-13;1!UBERON:0006595;1.83e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.57e-14!115;UBERON:0001829!3.17e-12!2;UBERON:0003127!6.76e-12!2;UBERON:0004921!8.06e-12!129;UBERON:0004185!8.06e-12!129;UBERON:0001007!2.64e-10!155;UBERON:0001555!2.64e-10!155;UBERON:0007026!2.64e-10!155;UBERON:0000078!4.70e-10!18;UBERON:0001155!6.67e-10!9;UBERON:0004119!4.42e-09!169;UBERON:0000925!4.42e-09!169;UBERON:0006595!4.42e-09!169;UBERON:0001044!5.97e-09!6;UBERON:0003293!5.97e-09!6;UBERON:0003294!5.97e-09!6;UBERON:0010047!5.97e-09!6;UBERON:0000167!5.97e-09!6;UBERON:0000166!1.57e-08!21;UBERON:0000059!4.14e-08!11;UBERON:0001723!1.28e-07!3;UBERON:0001033!1.28e-07!3;UBERON:0010056!1.28e-07!3;UBERON:0006562!1.30e-07!11;UBERON:0001736!5.58e-07!1;UBERON:0006298!5.58e-07!1;UBERON:0001831!6.59e-07!1;UBERON:0001567!6.59e-07!1;UBERON:0008801!6.59e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!8.57e-14!115;UBERON:0001829!3.17e-12!2;UBERON:0003127!6.76e-12!2;UBERON:0004921!8.06e-12!129;UBERON:0004185!8.06e-12!129;UBERON:0001007!2.64e-10!155;UBERON:0001555!2.64e-10!155;UBERON:0007026!2.64e-10!155;UBERON:0000078!4.70e-10!18;UBERON:0001155!6.67e-10!9;UBERON:0004119!4.42e-09!169;UBERON:0000925!4.42e-09!169;UBERON:0006595!4.42e-09!169;UBERON:0001044!5.97e-09!6;UBERON:0003293!5.97e-09!6;UBERON:0003294!5.97e-09!6;UBERON:0010047!5.97e-09!6;UBERON:0000167!5.97e-09!6;UBERON:0000166!1.57e-08!21;UBERON:0000059!4.14e-08!11;UBERON:0001723!1.28e-07!3;UBERON:0001033!1.28e-07!3;UBERON:0010056!1.28e-07!3;UBERON:0006562!1.30e-07!11;UBERON:0001736!5.58e-07!1;UBERON:0006298!5.58e-07!1;UBERON:0001831!6.59e-07!1;UBERON:0001567!6.59e-07!1;UBERON:0008801!6.59e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.13e-25;2!UBERON:0003127;3.54e-24;2!UBERON:0004921;6.55e-24;33!UBERON:0001155;4.05e-21;9!UBERON:0001044;1.08e-18;6!UBERON:0003293;1.08e-18;6!UBERON:0003294;1.08e-18;6!UBERON:0010047;1.08e-18;6!UBERON:0003408;1.08e-18;6!UBERON:0000167;1.08e-18;6!UBERON:0000059;2.43e-17;11!UBERON:0000160;2.67e-16;17!UBERON:0001736;1.61e-13;1!UBERON:0001831;2.18e-13;1!UBERON:0001567;2.18e-13;1!UBERON:0001154;7.68e-13;1!UBERON:0001153;7.68e-13;1!UBERON:0002171;7.68e-13;1!UBERON:0009854;7.68e-13;1!UBERON:0006518;7.68e-13;1!UBERON:0008949;7.68e-13;1!UBERON:0000101;7.68e-13;1!UBERON:0002167;7.68e-13;1!UBERON:0005409;9.46e-13;22!UBERON:0001555;6.58e-10;54!UBERON:0001041;2.48e-08;14!UBERON:0001007;3.91e-08;81!UBERON:0003126;1.40e-07;7!UBERON:0001005;1.40e-07;7!UBERON:0004089;2.50e-07;2!UBERON:0006562;3.38e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.38e-25,2;UBERON:0003127,2.34e-24,2;UBERON:0001155,3.56e-21,9;UBERON:0001044,1.08e-18,6;UBERON:0003293,1.08e-18,6;UBERON:0003294,1.08e-18,6;UBERON:0010047,1.08e-18,6;UBERON:0000167,1.08e-18,6;UBERON:0000059,2.19e-17,11;UBERON:0000160,2.50e-16,17;UBERON:0004921,5.17e-15,118;UBERON:0001007,5.37e-14,145;UBERON:0001555,5.37e-14,145;UBERON:0007026,5.37e-14,145;UBERON:0001736,1.61e-13,1;UBERON:0006298,1.61e-13,1;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0001154,7.68e-13,1;UBERON:0001153,7.68e-13,1;UBERON:0001045,7.68e-13,1;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0004119,1.62e-12,160;UBERON:0000925,1.62e-12,160;UBERON:0006595,1.62e-12,160;UBERON:0003408,1.86e-11,10;UBERON:0005409,2.72e-11,25;UBERON:0007023,4.10e-09,114;UBERON:0011216,2.77e-08,223;UBERON:0003126,1.25e-07,7;UBERON:0001005,1.25e-07,7;UBERON:0004089,2.58e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,1.38141957765574,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,10.9687379984141,1.83309043480088,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86863980342928,0.496211178389294,0,2.29972369751271,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89522925286638,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,7.71741581079447,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,15.1380663523498,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0.336760265072938,2.58199939413635,1.99596213927608,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,1.38141957765574,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,10.9687379984141,1.83309043480088,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86863980342928,0.496211178389294,0,2.29972369751271,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89522925286638,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,7.71741581079447,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,15.1380663523498,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0.336760265072938,2.58199939413635,1.99596213927608,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p4@AK026320 | |short_description=p4@AK026320 | ||
}} | }} |
Latest revision as of 03:01, 28 July 2015
Short description: | p4@AK026320 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK026320_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | -192bp_to_AK026320_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.38e-25 | 2 |
open tracheal system trachea | 2.34e-24 | 2 |
colon | 3.56e-21 | 9 |
saliva-secreting gland | 1.08e-18 | 6 |
gland of oral region | 1.08e-18 | 6 |
gland of foregut | 1.08e-18 | 6 |
oral gland | 1.08e-18 | 6 |
oral cavity | 1.08e-18 | 6 |
large intestine | 2.19e-17 | 11 |
intestine | 2.50e-16 | 17 |
subdivision of digestive tract | 5.17e-15 | 118 |
digestive system | 5.37e-14 | 145 |
digestive tract | 5.37e-14 | 145 |
primitive gut | 5.37e-14 | 145 |
submandibular gland | 1.61e-13 | 1 |
submandibular gland primordium | 1.61e-13 | 1 |
parotid gland | 2.32e-13 | 1 |
cheek | 2.32e-13 | 1 |
parotid gland primordium | 2.32e-13 | 1 |
vermiform appendix | 7.68e-13 | 1 |
caecum | 7.68e-13 | 1 |
midgut | 7.68e-13 | 1 |
lower lobe of right lung | 8.64e-13 | 1 |
right lung lobe | 8.64e-13 | 1 |
lower lobe of lung | 8.64e-13 | 1 |
lobe of lung | 8.64e-13 | 1 |
right lung | 8.64e-13 | 1 |
endoderm-derived structure | 1.62e-12 | 160 |
endoderm | 1.62e-12 | 160 |
presumptive endoderm | 1.62e-12 | 160 |
gland of gut | 1.86e-11 | 10 |
gastrointestinal system | 2.72e-11 | 25 |
adult organism | 4.10e-09 | 114 |
organ system subdivision | 2.77e-08 | 223 |
trachea | 1.25e-07 | 7 |
respiratory airway | 1.25e-07 | 7 |
midface | 2.58e-07 | 2 |