FFCP PHASE1:Hg19::chr1:19811702..19811730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:19811702..19811730,- | |||
|description=CAGE_peak_at_chr1:19811702..19811730,- | |description=CAGE_peak_at_chr1:19811702..19811730,- | ||
|id=chr1:19811702..19811730,- | |id=chr1:19811702..19811730,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;2.15e-13;4!CL:0002564;3.98e-10;3!CL:0002603;9.11e-10;3!CL:0002575;9.39e-08;2!CL:0002602;1.68e-07;2!CL:0000650;2.56e-07;2!CL:1000500;2.56e-07;2!CL:1000618;2.56e-07;2!CL:1001318;2.56e-07;2!CL:0002173;2.56e-07;2!CL:0002549;4.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.87e-13,4;CL:0002564,4.09e-10,3;CL:0002603,5.70e-10,3;CL:0002575,9.17e-08,2;CL:0002602,1.52e-07,2;CL:0000650,2.28e-07,2;CL:1000500,2.28e-07,2;CL:1000618,2.28e-07,2;CL:1001318,2.28e-07,2;CL:0002173,2.28e-07,2;CL:0002549,2.66e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.67e-07!82 | |ontology_enrichment_uberon=UBERON:0001017!5.67e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;6.23e-16;5!UBERON:0002216;6.23e-16;5!UBERON:0011134;6.23e-16;5!UBERON:0002209;6.23e-16;5!UBERON:0002213;6.23e-16;5!UBERON:0007844;6.23e-16;5!UBERON:0011138;6.23e-16;5!UBERON:0001130;6.23e-16;5!UBERON:0001066;6.23e-16;5!UBERON:0001468;6.23e-16;5!UBERON:0002242;3.98e-10;3!UBERON:0004905;8.51e-10;8!UBERON:0000982;8.51e-10;8!UBERON:0004770;8.51e-10;8!UBERON:0005284;1.31e-09;5!UBERON:0006876;4.40e-09;11!UBERON:0006444;1.68e-07;2!UBERON:0001995;1.68e-07;2!UBERON:0004715;1.68e-07;2!UBERON:0003567;2.56e-07;2!UBERON:0003838;2.56e-07;2!UBERON:0003586;2.56e-07;2!UBERON:0005169;2.56e-07;2!UBERON:0002321;2.56e-07;2!UBERON:0005215;2.56e-07;2!UBERON:0002303;2.56e-07;2!UBERON:0002319;2.56e-07;2!UBERON:0005629;4.16e-07;2!UBERON:0005358;4.16e-07;2!UBERON:0001886;4.16e-07;2!UBERON:0004086;4.16e-07;2!UBERON:0005282;4.16e-07;2!UBERON:0005281;4.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.79e-16,5;UBERON:0002216,5.79e-16,5;UBERON:0011134,5.79e-16,5;UBERON:0002209,5.79e-16,5;UBERON:0002213,5.79e-16,5;UBERON:0005856,5.79e-16,5;UBERON:0005866,5.79e-16,5;UBERON:0005863,5.79e-16,5;UBERON:0007844,5.79e-16,5;UBERON:0011138,5.79e-16,5;UBERON:0001130,5.79e-16,5;UBERON:0001066,5.79e-16,5;UBERON:0001468,5.79e-16,5;UBERON:0002242,4.09e-10,3;UBERON:0003068,4.09e-10,3;UBERON:0002328,4.09e-10,3;UBERON:0004880,4.09e-10,3;UBERON:0004905,8.13e-10,8;UBERON:0000982,8.13e-10,8;UBERON:0004770,8.13e-10,8;UBERON:0005284,8.97e-10,5;UBERON:0006876,2.81e-09,11;UBERON:0006444,1.52e-07,2;UBERON:0001995,1.52e-07,2;UBERON:0004715,1.52e-07,2;UBERON:0003567,2.28e-07,2;UBERON:0003838,2.28e-07,2;UBERON:0003586,2.28e-07,2;UBERON:0005169,2.28e-07,2;UBERON:0002321,2.28e-07,2;UBERON:0005215,2.28e-07,2;UBERON:0002303,2.28e-07,2;UBERON:0002319,2.28e-07,2;UBERON:0005629,2.66e-07,2;UBERON:0005358,2.66e-07,2;UBERON:0001886,2.66e-07,2;UBERON:0004086,2.66e-07,2;UBERON:0005282,2.66e-07,2;UBERON:0005281,2.66e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0.982935746006035,0,0,0.527533956456907,2.72285976512103,4.30816588446291,0.672325146451775,0,0,0,2.46242116153576,2.85600967741954,1.56727360739044,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0.971680998056939,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,1.13477044938228,0,0,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0,1.99556457716308,0.087834785693126,0.261958150995425,0,0.370784442784429,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,4.54072282934794,1.72852777344,0.234321431833797,0,0,0,0.117434498643765,0.647491777472526,0.561803226808994,1.02077085627447,0,1.23990937410919,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.125118519871964,1.6623846929051,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0.487894824518382,1.06023814657188,0.464775771478074,0.518305275076852,1.26160425437814,2.18986415445498,1.56449532329816,1.92972281457866,0,0,1.44375896333917,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0.492663237895943,0.44024217006613,0.207328115540772,0.432359860250884,0.37872730027914,0.126995788584338,0,1.17217447210047,0,0,0,0,1.00917975910825,3.92364061949952,0.51336800074665,0,3.57656445851882,0,0,0,1.54324424557285,2.83698264046557,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,0,0,0.716243852959582,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0.414415513436035,3.6807447515742,12.0040925054323,1.35632511849868,0,0,0.315404830067869,1.05427273493442,0,0,0,0.664225598535437,0,0.347534457872331,4.89502893656851,15.7845974952994,0,0.431428401637234,0.106727557803444,0,1.66435439510497,0.30239029332968,0.496215615637554,0,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.328508624055237,0,0.232420756919918,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,1.13733384070897,0.170093705276516,0.431831832204279,0,2.70946437543853,2.50844886927427,0,0,0,0,0,0,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0.275673144969061,0.859361958946189,0.290033387828457,0.170453254832202,0,0,0,0,0.30347334256665,1.39453664789186,0.94443704049192,2.0911118104818,0.616067160352178,0.532306030317022,1.73986598415015,1.29726953372744,0.572499546967965,1.116475108079,1.89827654831236,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0.975267478179181,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,1.28188885352968,5.77487913158015,0,0,0,0,0.318852545457645,0,0.5745161103971,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0.556543525114529,0.16480387422676,0.211125408127993,0.19924798825107,0.828851746593443,0.503865495708552,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0.260427761085233,0.262379999988587,0,0,0.762760950878299,0,0,0,0.520874984799877,0,0.723578631752448,0,0.221158519862449,0,0.658156191461918,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0,2.4441205797345,0.296521128680622,0.123563938946503,0.104421949505455,0.471807930864739,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0.311064574191741,0,0,0,0,0.853828638089378,0.416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| ||
|short_description=p@chr1:19811702..19811730,- | |short_description=p@chr1:19811702..19811730,- | ||
}} | }} |
Latest revision as of 01:52, 28 July 2015
Short description: | p@chr1:19811702..19811730, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19811702..19811730, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.87e-13 | 4 |
nucleus pulposus cell of intervertebral disc | 4.09e-10 | 3 |
astrocyte of the cerebellum | 5.70e-10 | 3 |
central nervous system pericyte | 9.17e-08 | 2 |
annulus pulposus cell | 1.52e-07 | 2 |
mesangial cell | 2.28e-07 | 2 |
kidney interstitial cell | 2.28e-07 | 2 |
juxtaglomerular complex cell | 2.28e-07 | 2 |
renal interstitial pericyte | 2.28e-07 | 2 |
extraglomerular mesangial cell | 2.28e-07 | 2 |
fibroblast of choroid plexus | 2.66e-07 | 2 |