FFCP PHASE1:Hg19::chr1:19778678..19778689,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:19778678..19778689,- | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr1:19778678..19778689,- | |description=CAGE_peak_at_chr1:19778678..19778689,- | ||
|id=chr1:19778678..19778689,- | |id=chr1:19778678..19778689,- | ||
|ontology_enrichment_celltype=CL:0002564!5.60e-10!3;CL:0002590!1.61e-09!3;CL:0000708!7.24e-09!3;CL:0002540!3.87e-08!6;CL:0002575!1.20e-07!2;CL:0002549!1.35e-07!2;CL:0002602!1.63e-07!2;CL:0002092!3.09e-07!10 | |ontology_enrichment_celltype=CL:0002564!5.60e-10!3;CL:0002590!1.61e-09!3;CL:0000708!7.24e-09!3;CL:0002540!3.87e-08!6;CL:0002575!1.20e-07!2;CL:0002549!1.35e-07!2;CL:0002602!1.63e-07!2;CL:0002092!3.09e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002575;3.99e-41;2!CL:0002549;1.64e-40;2!CL:0002602;3.67e-40;2!CL:0002564;3.56e-27;3!CL:0000669;3.82e-21;4!CL:0002521;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.99e-41,2;CL:0002549,8.98e-41,2;CL:0002602,3.01e-40,2;CL:0002564,6.92e-27,3;CL:0000669,3.82e-21,4;CL:0002521,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!2.07e-15!5;UBERON:0002300!2.14e-10!3;UBERON:0002242!5.60e-10!3;UBERON:0003068!5.60e-10!3;UBERON:0002328!5.60e-10!3;UBERON:0004880!5.60e-10!3;UBERON:0003210!7.24e-09!3;UBERON:0003947!1.35e-07!2;UBERON:0005629!1.35e-07!2;UBERON:0005358!1.35e-07!2;UBERON:0001886!1.35e-07!2;UBERON:0004086!1.35e-07!2;UBERON:0005282!1.35e-07!2;UBERON:0005281!1.35e-07!2;UBERON:0009568!1.63e-07!2;UBERON:0002216!1.63e-07!2;UBERON:0002209!1.63e-07!2;UBERON:0002213!1.63e-07!2;UBERON:0004267!1.63e-07!2;UBERON:0006444!1.63e-07!2;UBERON:0001995!1.63e-07!2;UBERON:0004715!1.63e-07!2;UBERON:0001468!1.63e-07!2;UBERON:0001130!1.63e-07!2;UBERON:0001066!1.63e-07!2;UBERON:0002200!9.15e-07!11;UBERON:0006876!9.15e-07!11 | |ontology_enrichment_uberon=UBERON:0005284!2.07e-15!5;UBERON:0002300!2.14e-10!3;UBERON:0002242!5.60e-10!3;UBERON:0003068!5.60e-10!3;UBERON:0002328!5.60e-10!3;UBERON:0004880!5.60e-10!3;UBERON:0003210!7.24e-09!3;UBERON:0003947!1.35e-07!2;UBERON:0005629!1.35e-07!2;UBERON:0005358!1.35e-07!2;UBERON:0001886!1.35e-07!2;UBERON:0004086!1.35e-07!2;UBERON:0005282!1.35e-07!2;UBERON:0005281!1.35e-07!2;UBERON:0009568!1.63e-07!2;UBERON:0002216!1.63e-07!2;UBERON:0002209!1.63e-07!2;UBERON:0002213!1.63e-07!2;UBERON:0004267!1.63e-07!2;UBERON:0006444!1.63e-07!2;UBERON:0001995!1.63e-07!2;UBERON:0004715!1.63e-07!2;UBERON:0001468!1.63e-07!2;UBERON:0001130!1.63e-07!2;UBERON:0001066!1.63e-07!2;UBERON:0002200!9.15e-07!11;UBERON:0006876!9.15e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;6.65e-63;5!UBERON:0002216;6.65e-63;5!UBERON:0011134;6.65e-63;5!UBERON:0002209;6.65e-63;5!UBERON:0002213;6.65e-63;5!UBERON:0007844;6.65e-63;5!UBERON:0011138;6.65e-63;5!UBERON:0001130;6.65e-63;5!UBERON:0001066;6.65e-63;5!UBERON:0001468;6.65e-63;5!UBERON:0005629;1.64e-40;2!UBERON:0005358;1.64e-40;2!UBERON:0001886;1.64e-40;2!UBERON:0004086;1.64e-40;2!UBERON:0005282;1.64e-40;2!UBERON:0005281;1.64e-40;2!UBERON:0006444;3.67e-40;2!UBERON:0001995;3.67e-40;2!UBERON:0004715;3.67e-40;2!UBERON:0004905;1.43e-39;8!UBERON:0000982;1.43e-39;8!UBERON:0004770;1.43e-39;8!UBERON:0002418;3.56e-27;3!UBERON:0004755;3.56e-27;3!UBERON:0002242;3.56e-27;3!UBERON:0000075;4.61e-20;16!UBERON:0005284;6.93e-17;5!UBERON:0004765;1.63e-12;26!UBERON:0006876;3.37e-08;11!UBERON:0002190;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.26e-62,5;UBERON:0002216,1.26e-62,5;UBERON:0011134,1.26e-62,5;UBERON:0002209,1.26e-62,5;UBERON:0002213,1.26e-62,5;UBERON:0005856,1.26e-62,5;UBERON:0005866,1.26e-62,5;UBERON:0005863,1.26e-62,5;UBERON:0007844,1.26e-62,5;UBERON:0011138,1.26e-62,5;UBERON:0001130,1.26e-62,5;UBERON:0001066,1.26e-62,5;UBERON:0001468,1.26e-62,5;UBERON:0005629,8.98e-41,2;UBERON:0005358,8.98e-41,2;UBERON:0001886,8.98e-41,2;UBERON:0004086,8.98e-41,2;UBERON:0005282,8.98e-41,2;UBERON:0005281,8.98e-41,2;UBERON:0006444,3.01e-40,2;UBERON:0001995,3.01e-40,2;UBERON:0004715,3.01e-40,2;UBERON:0004905,2.13e-39,8;UBERON:0000982,2.13e-39,8;UBERON:0004770,2.13e-39,8;UBERON:0002418,3.11e-27,3;UBERON:0004755,3.11e-27,3;UBERON:0002242,6.92e-27,3;UBERON:0003068,6.92e-27,3;UBERON:0002328,6.92e-27,3;UBERON:0004880,6.92e-27,3;UBERON:0000075,5.62e-20,16;UBERON:0005284,5.45e-17,5;UBERON:0006876,3.03e-08,11;UBERON:0002190,6.34e-08,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,1.11389717664042,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,4.08665054641315,1.72852777344,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,10.573262502988,8.23544217146054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0.453692771289717,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,1.11389717664042,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,4.08665054641315,1.72852777344,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,10.573262502988,8.23544217146054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0.453692771289717,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:19778678..19778689,- | |short_description=p@chr1:19778678..19778689,- | ||
}} | }} |
Latest revision as of 01:51, 28 July 2015
Short description: | p@chr1:19778678..19778689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19778678..19778689, - |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.99e-41 | 2 |
fibroblast of choroid plexus | 8.98e-41 | 2 |
annulus pulposus cell | 3.01e-40 | 2 |
nucleus pulposus cell of intervertebral disc | 6.92e-27 | 3 |
pericyte cell | 3.82e-21 | 4 |
subcutaneous fat cell | 6.34e-08 | 3 |