FFCP PHASE1:Hg19::chr12:53438236..53438270,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:53438236..53438270,+
|short_description=p@chr12:53438236..53438270,+
|description=CAGE_peak_at_chr12:53438236..53438270,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53438236..53438270,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr12:53438236..53438270,+ | |||
|id=chr12:53438236..53438270,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.49e-16!10;CL:0000541!1.49e-16!10;CL:0000147!3.46e-11!14;CL:0002567!9.72e-08!3;CL:0000710!3.34e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.99e-21;10!CL:0000147;8.69e-15;14!CL:0002567;2.84e-14;3!CL:0000710;4.96e-10;20!CL:0000075;3.70e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.34e-21,10;CL:0000541,4.34e-21,10;CL:0000147,9.21e-15,14;CL:0002567,3.26e-14,3;CL:0000710,5.16e-10,20;CL:0000075,3.80e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-18;82!UBERON:0010122;5.54e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.54e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.81e-09,2 | |||
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| ||
|short_description=p@chr12:53438236..53438270,+ | |||
}} | }} |
Latest revision as of 09:44, 24 July 2015
Short description: | p@chr12:53438236..53438270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53438236..53438270, + |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.34e-21 | 10 |
melanoblast | 4.34e-21 | 10 |
pigment cell | 9.21e-15 | 14 |
light melanocyte | 3.26e-14 | 3 |
neurecto-epithelial cell | 5.16e-10 | 20 |
columnar/cuboidal epithelial cell | 3.80e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.81e-09 | 2 |