FFCP PHASE1:Hg19::chr1:158300919..158300933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=910 | |EntrezGene=910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1635 | |HGNC=1635 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_uc001frw.2_5end | |association_with_transcript=-67bp_to_uc001frw.2_5end | ||
|cluster_id=chr1:158300919..158300933,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_11_at_CD1B_5end | |description=CAGE_peak_11_at_CD1B_5end | ||
|id=chr1:158300919..158300933,- | |id=chr1:158300919..158300933,- | ||
|ontology_enrichment_celltype=CL:0000840!2.78e-18!5;CL:0001029!2.78e-18!5;CL:0000990!2.15e-12!8;CL:0000451!3.04e-10!10 | |ontology_enrichment_celltype=CL:0000840!2.78e-18!5;CL:0001029!2.78e-18!5;CL:0000990!2.15e-12!8;CL:0000451!3.04e-10!10 | ||
|ontology_enrichment_celltype_v019=CL:0000840;2.81e-17;5!CL:0000990;7.27e-12;8!CL:0000451;6.93e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.81e-17,5;CL:0001029,2.81e-17,5;CL:0000990,7.27e-12,8;CL:0000451,6.93e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:8552!7.68e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.90e-16!7;UBERON:0002370!4.50e-13!4;UBERON:0005058!4.50e-13!4;UBERON:0009113!4.50e-13!4;UBERON:0003295!4.50e-13!4;UBERON:0005562!4.50e-13!4;UBERON:0000974!2.38e-11!10;UBERON:0003351!5.14e-09!6;UBERON:0000341!3.93e-07!2 | |ontology_enrichment_uberon=UBERON:0004177!7.90e-16!7;UBERON:0002370!4.50e-13!4;UBERON:0005058!4.50e-13!4;UBERON:0009113!4.50e-13!4;UBERON:0003295!4.50e-13!4;UBERON:0005562!4.50e-13!4;UBERON:0000974!2.38e-11!10;UBERON:0003351!5.14e-09!6;UBERON:0000341!3.93e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.14e-50;2!UBERON:0005058;1.14e-50;2!UBERON:0009113;1.14e-50;2!UBERON:0004177;5.44e-21;5!UBERON:0005057;5.44e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.94e-26,4;UBERON:0005058,5.94e-26,4;UBERON:0009113,5.94e-26,4;UBERON:0003295,5.94e-26,4;UBERON:0005562,5.94e-26,4;UBERON:0003351,1.12e-17,6;UBERON:0004177,2.65e-15,7;UBERON:0005057,2.65e-15,7;UBERON:0000974,5.15e-11,10;UBERON:0003408,5.15e-11,10;UBERON:0001042,5.15e-11,10;UBERON:0009145,5.15e-11,10;UBERON:0006562,4.22e-10,11;UBERON:0009722,4.22e-10,11;UBERON:0007690,4.22e-10,11 | |||
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|short_description=p11@CD1B | |short_description=p11@CD1B | ||
}} | }} |
Latest revision as of 20:42, 17 September 2015
Short description: | p11@CD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CD1B_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -67bp_to_uc001frw.2_5end |
EntrezGene: | CD1B |
HGNC: | 1635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.81e-17 | 5 |
common dendritic progenitor | 2.81e-17 | 5 |
conventional dendritic cell | 7.27e-12 | 8 |
dendritic cell | 6.93e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.94e-26 | 4 |
hemolymphoid system gland | 5.94e-26 | 4 |
thymic region | 5.94e-26 | 4 |
pharyngeal gland | 5.94e-26 | 4 |
thymus primordium | 5.94e-26 | 4 |
pharyngeal epithelium | 1.12e-17 | 6 |
hemopoietic organ | 2.65e-15 | 7 |
immune organ | 2.65e-15 | 7 |
neck | 5.15e-11 | 10 |
gland of gut | 5.15e-11 | 10 |
chordate pharynx | 5.15e-11 | 10 |
pharyngeal region of foregut | 5.15e-11 | 10 |
pharynx | 4.22e-10 | 11 |
entire pharyngeal arch endoderm | 4.22e-10 | 11 |
early pharyngeal endoderm | 4.22e-10 | 11 |