FFCP PHASE1:Hg19::chr12:52908759..52908818,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52908759..52908818,-
|short_description=p@chr12:52908759..52908818,-
|description=CAGE_peak_at_chr12:52908759..52908818,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52908759..52908818,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52908759..52908818,- | |||
|id=chr12:52908759..52908818,- | |||
|ontology_enrichment_celltype=CL:0002076!6.44e-26!43;CL:0000223!1.19e-17!59;CL:0002251!5.38e-17!21;CL:0000066!1.33e-15!254;CL:0002159!7.20e-13!13;CL:0002368!2.96e-12!13;CL:0000622!9.30e-10!5;CL:0000076!9.57e-10!62;CL:0002077!3.33e-08!33;CL:0000154!5.28e-08!6;CL:0000244!6.44e-08!4;CL:0000731!6.44e-08!4;CL:0002202!7.94e-07!9;CL:0002632!7.94e-07!9;CL:0000150!9.98e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.37e-23;42!CL:0002251;1.58e-19;20!CL:0002368;1.46e-16;13!CL:0002159;5.50e-16;14!CL:0000622;1.04e-12;5!CL:0000154;1.69e-10;6!CL:0000244;3.21e-10;4!CL:0000731;3.21e-10;4!CL:0002202;3.98e-09;9!CL:0002632;3.98e-09;9!CL:0002623;2.73e-08;3!CL:0002328;4.38e-08;3!CL:0002621;5.71e-08;3!CL:0000307;9.90e-08;3!CL:0000349;1.08e-07;19!CL:0002077;1.23e-07;34!CL:0002166;1.55e-07;3!CL:0002577;1.57e-07;3!CL:0000240;4.10e-07;6!CL:0000311;4.10e-07;6!CL:0000079;4.10e-07;6!CL:0000237;4.10e-07;6!CL:0000362;6.44e-07;9!CL:0000150;8.27e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.97e-31,42;CL:0000223,7.22e-22,58;CL:0002251,1.42e-19,20;CL:0000066,4.31e-19,253;CL:0002368,1.46e-16,13;CL:0002159,5.50e-16,14;CL:0000622,1.03e-12,5;CL:0000154,1.68e-10,6;CL:0000244,3.25e-10,4;CL:0000731,3.25e-10,4;CL:0000076,2.56e-09,63;CL:0002202,4.06e-09,9;CL:0002632,4.06e-09,9;CL:0002077,6.29e-09,34;CL:0002623,2.70e-08,3;CL:0002328,4.43e-08,3;CL:0002621,5.72e-08,3;CL:0000068,1.01e-07,3;CL:0000069,1.01e-07,3;CL:0000307,1.01e-07,3;CL:0000377,1.01e-07,3;CL:0000349,1.07e-07,19;CL:0002577,1.52e-07,3;CL:0002166,1.55e-07,3;CL:0000240,4.10e-07,6;CL:0000311,4.10e-07,6;CL:0000079,4.10e-07,6;CL:0000237,4.10e-07,6;CL:0000036,4.10e-07,6;CL:0000357,4.10e-07,6;CL:0000114,4.10e-07,6;CL:0000362,6.44e-07,9;CL:0000150,8.22e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.23e-11;58!CL:0000377;9.90e-08;3!CL:0000357;4.10e-07;6!CL:0000114;4.10e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!3.69e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.71e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.76e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!7.27e-17!21;UBERON:0000161!7.99e-17!35;UBERON:0001004!1.38e-16!72;UBERON:0004119!1.92e-15!169;UBERON:0000925!1.92e-15!169;UBERON:0006595!1.92e-15!169;UBERON:0000165!2.63e-13!28;UBERON:0000930!2.63e-13!28;UBERON:0003102!8.88e-11!95;UBERON:0005631!8.06e-10!14;UBERON:0000158!8.06e-10!14;UBERON:0001044!1.41e-09!6;UBERON:0003293!1.41e-09!6;UBERON:0003294!1.41e-09!6;UBERON:0010047!1.41e-09!6;UBERON:0000167!1.41e-09!6;UBERON:0003408!3.76e-09!10;UBERON:0000365!4.40e-09!5;UBERON:0000974!4.93e-09!10;UBERON:0001444!9.37e-09!48;UBERON:0000065!9.47e-09!53;UBERON:0003729!1.06e-08!5;UBERON:0001007!1.73e-08!155;UBERON:0001555!1.73e-08!155;UBERON:0007026!1.73e-08!155;UBERON:0000077!1.62e-07!130;UBERON:0005910!1.87e-07!6;UBERON:0000344!2.03e-07!12;UBERON:0000078!3.58e-07!18;UBERON:0003343!4.81e-07!4;UBERON:0004785!4.81e-07!4;UBERON:0001987!7.60e-07!4;UBERON:0004340!7.60e-07!4;UBERON:0007196!9.17e-07!14;UBERON:0001558!9.17e-07!14;UBERON:0004921!9.56e-07!129;UBERON:0004185!9.56e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.96e-13;28!UBERON:0000161;1.74e-12;19!UBERON:0000166;1.74e-12;19!UBERON:0000365;8.49e-12;5!UBERON:0000486;1.70e-11;12!UBERON:0003729;3.59e-10;13!UBERON:0005910;9.48e-10;6!UBERON:0000344;2.85e-09;20!UBERON:0003343;5.19e-09;4!UBERON:0004785;5.19e-09;4!UBERON:0000974;6.26e-09;6!UBERON:0007196;1.51e-08;15!UBERON:0001558;1.51e-08;15!UBERON:0004815;4.38e-08;3!UBERON:0002031;4.38e-08;3!UBERON:0001949;5.71e-08;3!UBERON:0003126;9.39e-08;7!UBERON:0001005;9.39e-08;7!UBERON:0000305;1.52e-07;7!UBERON:0001723;3.67e-07;3!UBERON:0001033;3.67e-07;3!UBERON:0005631;3.67e-07;10!UBERON:0000158;3.67e-07;10!UBERON:0000478;5.04e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.05e-15,74;UBERON:0000166,8.03e-15,22;UBERON:0004119,1.69e-13,160;UBERON:0000925,1.69e-13,160;UBERON:0006595,1.69e-13,160;UBERON:0003102,5.51e-13,99;UBERON:0000165,2.16e-12,29;UBERON:0000930,2.16e-12,29;UBERON:0000161,2.34e-12,36;UBERON:0000153,5.93e-12,62;UBERON:0007811,5.93e-12,62;UBERON:0000365,8.49e-12,5;UBERON:0005631,4.35e-11,14;UBERON:0000158,4.35e-11,14;UBERON:0003729,3.50e-10,13;UBERON:0000033,4.25e-10,56;UBERON:0005910,9.48e-10,6;UBERON:0000974,2.01e-09,10;UBERON:0000344,2.78e-09,20;UBERON:0003343,4.97e-09,4;UBERON:0004785,4.97e-09,4;UBERON:0000065,9.87e-09,54;UBERON:0007196,1.51e-08,15;UBERON:0001558,1.51e-08,15;UBERON:0006562,2.66e-08,11;UBERON:0001444,2.78e-08,49;UBERON:0004923,4.37e-08,66;UBERON:0004815,4.43e-08,3;UBERON:0002031,4.43e-08,3;UBERON:0001949,5.72e-08,3;UBERON:0003126,9.32e-08,7;UBERON:0001005,9.32e-08,7;UBERON:0000305,1.56e-07,7;UBERON:0001723,3.51e-07,3;UBERON:0001033,3.51e-07,3;UBERON:0010056,3.51e-07,3;UBERON:0000478,5.00e-07,24;UBERON:0001042,6.43e-07,10;UBERON:0009145,6.43e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,10.9220686065086,10.5506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.3119616317509,82.2292158264623,43.6309731996809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,162.475698578474,262.144601048592,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,236.799070313396,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,42.324126842762,94.097411603838,52.1984363607987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,122.920319657661,107.905683127315,130.185019273062,113.791199099833,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8695035555042,29.7328366911981,45.2262560203213,33.1366534000539,65.3926361656414,57.5074018747817,0,0,0,0,0,0.317489471460845,0,0,11.9750712215894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,63.3536624322682,29.9583791118895,16.6314661331324,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,68.5732128437234,57.734780062807,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.5552261096364,399.136991066424,0,0,0,0,0,0,0,0,0,66.7751058058352,42.6661949550536,34.3278196610431,50.2754170852083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,31.6570750866935,50.2726706651841,57.712221976501,0,61.9927736646571,141.516039560805,140.567358671126,16.0806380144872,0,0,0,0,0,0,0,0,0,0,21.5635390063308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.2577737985711,2.07875276582847,38.7022484645032,0,0,0,0,8.23389091699175,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,8.42071517312698,0,0,0,0,0,0,0,0,0,0,0,0,61.0675999940282,5.1556673197544,0,0,0,0,8.93203247249374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13063390291344,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,13.1309812535266,10.4471047896483,2.27144668714639,0,0,0,0,37.7287274139952,0,4.29363407483012,0,0,0,0,0,0,1.9980960958213,0.144090417154106,0,0,0,0,18.6198287347268,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,5.41661368190565,0,89.8964962766033,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,16.5968727020247,0,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0.110929051536852,0,0,2.62458856720424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,22.23370419559,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9671073259806,37.9467128620113,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,19.5313959817041,5.66254672069154,87.1285842977975,3.46576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,11.4128571029538,0,4.85497225030462,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,76.8771969044867,120.868681782517,67.743446857781,0.860454717640555,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,17.485595750129,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,9.64191268470551,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,11.727869004554,0.714193294391221,1.74390056557216,3.28995985768047,0,0.0636471582781649,0,78.3780292429061,8.89806582821731,6.06168477131288,4.30333232356058,5.98788641782824,3.41893728166093,0,0,0,2.34640942403454,0.488965776731466,20.3448089157869,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,10.9220686065086,10.5506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.3119616317509,82.2292158264623,43.6309731996809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,162.475698578474,262.144601048592,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,236.799070313396,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,42.324126842762,94.097411603838,52.1984363607987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,122.920319657661,107.905683127315,130.185019273062,113.791199099833,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8695035555042,29.7328366911981,45.2262560203213,33.1366534000539,65.3926361656414,57.5074018747817,0,0,0,0,0,0.317489471460845,0,0,11.9750712215894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,63.3536624322682,29.9583791118895,16.6314661331324,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,68.5732128437234,57.734780062807,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.5552261096364,399.136991066424,0,0,0,0,0,0,0,0,0,66.7751058058352,42.6661949550536,34.3278196610431,50.2754170852083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,31.6570750866935,50.2726706651841,57.712221976501,0,61.9927736646571,141.516039560805,140.567358671126,16.0806380144872,0,0,0,0,0,0,0,0,0,0,21.5635390063308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.2577737985711,2.07875276582847,38.7022484645032,0,0,0,0,8.23389091699175,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,8.42071517312698,0,0,0,0,0,0,0,0,0,0,0,0,61.0675999940282,5.1556673197544,0,0,0,0,8.93203247249374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13063390291344,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,13.1309812535266,10.4471047896483,2.27144668714639,0,0,0,0,37.7287274139952,0,4.29363407483012,0,0,0,0,0,0,1.9980960958213,0.144090417154106,0,0,0,0,18.6198287347268,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,5.41661368190565,0,89.8964962766033,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,16.5968727020247,0,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0.110929051536852,0,0,2.62458856720424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,22.23370419559,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9671073259806,37.9467128620113,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,19.5313959817041,5.66254672069154,87.1285842977975,3.46576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,11.4128571029538,0,4.85497225030462,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,76.8771969044867,120.868681782517,67.743446857781,0.860454717640555,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,17.485595750129,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,9.64191268470551,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,11.727869004554,0.714193294391221,1.74390056557216,3.28995985768047,0,0.0636471582781649,0,78.3780292429061,8.89806582821731,6.06168477131288,4.30333232356058,5.98788641782824,3.41893728166093,0,0,0,2.34640942403454,0.488965776731466,20.3448089157869,0,0.603821380773079,0 | ||
|short_description=p@chr12:52908759..52908818,- | |||
}} | }} |
Latest revision as of 09:35, 24 July 2015
Short description: | p@chr12:52908759..52908818, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52908759..52908818, - |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.76e-16 | 14 |