FFCP PHASE1:Hg19::chr4:145568348..145568363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145568348..145568363,- | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_at_chr4:145568348..145568363,- | |description=CAGE_peak_at_chr4:145568348..145568363,- | ||
|id=chr4:145568348..145568363,- | |id=chr4:145568348..145568363,- | ||
|ontology_enrichment_celltype=CL:0002139!1.02e-22!24;CL:0000115!1.16e-17!35;CL:0000071!2.93e-17!18;CL:0002546!2.93e-17!18;CL:0002078!2.47e-13!44;CL:0000222!7.34e-11!119;CL:0000213!9.41e-11!57;CL:0000215!9.41e-11!57;CL:1000413!8.35e-10!9;CL:0002544!5.03e-07!6;CL:0005020!5.19e-07!6;CL:0002138!5.19e-07!6;CL:0005022!5.19e-07!6;CL:0002543!5.66e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.02e-22!24;CL:0000115!1.16e-17!35;CL:0000071!2.93e-17!18;CL:0002546!2.93e-17!18;CL:0002078!2.47e-13!44;CL:0000222!7.34e-11!119;CL:0000213!9.41e-11!57;CL:0000215!9.41e-11!57;CL:1000413!8.35e-10!9;CL:0002544!5.03e-07!6;CL:0005020!5.19e-07!6;CL:0002138!5.19e-07!6;CL:0005022!5.19e-07!6;CL:0002543!5.66e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.41e-12;36!CL:0002139;1.51e-12;24!CL:0000071;1.47e-10;18!CL:1000306;3.94e-10;4!CL:0002547;3.94e-10;4!CL:0002078;1.05e-09;45!CL:0000213;6.05e-08;58!CL:0000215;6.05e-08;58!CL:1000413;1.73e-07;9!CL:0002543;4.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.12e-14,36;CL:0002078,5.62e-13,45;CL:0002139,1.23e-12,24;CL:0000213,4.54e-11,58;CL:0000215,4.54e-11,58;CL:0000071,1.19e-10,18;CL:0002546,1.19e-10,18;CL:1000306,3.96e-10,4;CL:0002547,3.96e-10,4;CL:1000413,1.36e-07,9;CL:0002543,4.74e-07,6;CL:0002544,7.92e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.47e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!9.09e-31!194;UBERON:0004111!7.33e-26!241;UBERON:0000477!7.52e-26!286;UBERON:0002049!8.01e-25!79;UBERON:0007798!8.01e-25!79;UBERON:0000055!2.33e-23!69;UBERON:0000119!1.46e-20!312;UBERON:0001981!2.20e-20!60;UBERON:0007500!2.20e-20!60;UBERON:0004537!2.20e-20!60;UBERON:0006965!2.20e-20!60;UBERON:0000483!5.61e-20!309;UBERON:0001049!1.81e-19!57;UBERON:0005068!1.81e-19!57;UBERON:0006241!1.81e-19!57;UBERON:0007135!1.81e-19!57;UBERON:0004535!3.80e-19!110;UBERON:0002616!7.66e-19!59;UBERON:0001009!4.18e-18!113;UBERON:0004872!5.68e-18!84;UBERON:0001986!2.93e-17!18;UBERON:0004638!2.93e-17!18;UBERON:0004852!2.93e-17!18;UBERON:0000955!1.94e-16!69;UBERON:0006238!1.94e-16!69;UBERON:0001637!5.59e-15!42;UBERON:0003509!5.59e-15!42;UBERON:0004572!5.59e-15!42;UBERON:0001017!9.72e-15!82;UBERON:0005743!3.60e-14!86;UBERON:0003075!7.30e-14!86;UBERON:0007284!7.30e-14!86;UBERON:0002346!1.36e-13!90;UBERON:0003914!1.55e-13!118;UBERON:0001893!3.28e-13!34;UBERON:0002020!5.47e-13!34;UBERON:0003528!5.47e-13!34;UBERON:0000487!6.19e-13!22;UBERON:0000073!9.60e-13!94;UBERON:0001016!9.60e-13!94;UBERON:0002791!1.96e-12!33;UBERON:0006914!3.27e-12!25;UBERON:0004573!3.34e-12!33;UBERON:0004571!3.34e-12!33;UBERON:0002780!6.36e-12!41;UBERON:0001890!6.36e-12!41;UBERON:0006240!6.36e-12!41;UBERON:0001869!1.82e-11!32;UBERON:0003080!1.94e-11!42;UBERON:0003076!3.94e-10!15;UBERON:0003057!3.94e-10!15;UBERON:0003915!8.35e-10!9;UBERON:0004700!8.35e-10!9;UBERON:0001917!8.35e-10!9;UBERON:0000956!1.37e-09!25;UBERON:0000203!1.37e-09!25;UBERON:0003056!1.86e-09!61;UBERON:0002619!1.96e-09!22;UBERON:0000153!2.27e-09!129;UBERON:0007811!2.27e-09!129;UBERON:0004733!1.50e-08!12;UBERON:0002028!1.50e-08!12;UBERON:0007277!1.50e-08!12;UBERON:0007023!2.61e-08!115;UBERON:0000033!3.95e-08!123;UBERON:0001950!6.52e-08!20;UBERON:0000947!1.02e-07!21;UBERON:0010191!1.02e-07!21;UBERON:0000490!1.12e-07!138;UBERON:0004732!1.17e-07!13;UBERON:0001638!1.90e-07!9;UBERON:0003920!1.90e-07!9;UBERON:0004582!1.90e-07!9 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.91e-14,68;UBERON:0002049,3.98e-13,78;UBERON:0007798,3.98e-13,78;UBERON:0007500,1.28e-12,59;UBERON:0001981,1.28e-12,59;UBERON:0004537,1.28e-12,59;UBERON:0006965,1.28e-12,59;UBERON:0004638,1.19e-10,18;UBERON:0001986,1.19e-10,18;UBERON:0004852,1.19e-10,18;UBERON:0000415,3.96e-10,4;UBERON:0007240,3.96e-10,4;UBERON:0005742,3.96e-10,4;UBERON:0005734,3.96e-10,4;UBERON:0004664,3.96e-10,4;UBERON:0004663,3.96e-10,4;UBERON:0006914,1.59e-09,25;UBERON:0004535,2.32e-09,109;UBERON:0004872,2.90e-09,83;UBERON:0001009,5.36e-09,112;UBERON:0000025,1.37e-08,192;UBERON:0000487,1.53e-08,22;UBERON:0001637,3.83e-08,42;UBERON:0003509,3.83e-08,42;UBERON:0004572,3.83e-08,42;UBERON:0001638,1.16e-07,9;UBERON:0003920,1.16e-07,9;UBERON:0004582,1.16e-07,9;UBERON:0003915,1.36e-07,9;UBERON:0004700,1.36e-07,9;UBERON:0001917,1.36e-07,9;UBERON:0003914,1.72e-07,117;UBERON:0003351,3.54e-07,6;UBERON:0004111,3.80e-07,240;UBERON:0004573,5.74e-07,33;UBERON:0004571,5.74e-07,33 | |||
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| ||
|short_description=p@chr4:145568348..145568363,- | |short_description=p@chr4:145568348..145568363,- | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145568348..145568363, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145568348..145568363, - |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.12e-14 | 36 |
meso-epithelial cell | 5.62e-13 | 45 |
endothelial cell of vascular tree | 1.23e-12 | 24 |
lining cell | 4.54e-11 | 58 |
barrier cell | 4.54e-11 | 58 |
blood vessel endothelial cell | 1.19e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.19e-10 | 18 |
fibroblast of tunica adventitia of artery | 3.96e-10 | 4 |
fibroblast of the aortic adventitia | 3.96e-10 | 4 |
endothelial cell of artery | 1.36e-07 | 9 |
vein endothelial cell | 4.74e-07 | 6 |
aortic endothelial cell | 7.92e-07 | 6 |