FFCP PHASE1:Hg19::chr1:156641913..156641932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10763 | |EntrezGene=10763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7756 | |HGNC=7756 | ||
|TSSclassifier=strong | |||
|UniProt=P48681 | |UniProt=P48681 | ||
|association_with_transcript=238bp_to_AB073350_5end | |association_with_transcript=238bp_to_AB073350_5end | ||
|cluster_id=chr1:156641913..156641932,- | |||
|coexpression_cluster_id=C797 | |||
|description=CAGE_peak_3_at_NES_5end | |description=CAGE_peak_3_at_NES_5end | ||
|id=chr1:156641913..156641932,- | |id=chr1:156641913..156641932,- | ||
|ontology_enrichment_celltype=CL:0000055!9.42e-12!180;CL:0002139!8.31e-10!24;CL:0000115!3.61e-08!35;CL:0000071!5.52e-08!18;CL:0002546!5.52e-08!18;CL:0000057!1.01e-07!75;CL:0000133!2.15e-07!59 | |ontology_enrichment_celltype=CL:0000055!9.42e-12!180;CL:0002139!8.31e-10!24;CL:0000115!3.61e-08!35;CL:0000071!5.52e-08!18;CL:0002546!5.52e-08!18;CL:0000057!1.01e-07!75;CL:0000133!2.15e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.48e-15;5!CL:0002139;7.99e-14;24!CL:0000071;6.47e-13;18!CL:0000115;2.56e-11;36!CL:0002605;1.01e-10;3!CL:0002321;3.75e-09;15!CL:1000413;3.90e-09;9!CL:0000128;6.74e-08;7!CL:0000126;6.74e-08;7!CL:0000127;6.74e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.11e-15,5;CL:0002139,1.01e-13,24;CL:0000071,7.84e-13,18;CL:0002546,7.84e-13,18;CL:0000115,4.29e-12,36;CL:0002605,7.77e-11,3;CL:1000413,3.36e-09,9;CL:0002078,4.36e-09,45;CL:0002321,5.49e-08,250;CL:0000128,5.86e-08,7;CL:0000126,5.86e-08,7;CL:0000127,5.86e-08,7;CL:0002453,5.86e-08,7;CL:0000222,6.24e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;6.47e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.70e-12!312;UBERON:0000483!3.97e-11!309;UBERON:0000477!1.04e-09!286;UBERON:0004111!1.81e-09!241;UBERON:0002049!4.42e-08!79;UBERON:0007798!4.42e-08!79;UBERON:0001986!5.52e-08!18;UBERON:0004638!5.52e-08!18;UBERON:0004852!5.52e-08!18;UBERON:0003914!6.32e-08!118;UBERON:0000025!7.04e-08!194;UBERON:0000475!1.22e-07!365;UBERON:0000480!1.86e-07!626;UBERON:0000467!3.50e-07!625;UBERON:0000055!3.65e-07!69;UBERON:0001009!4.29e-07!113;UBERON:0000468!4.44e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.47e-13;18!UBERON:0001986;6.47e-13;18!UBERON:0004852;6.47e-13;18!UBERON:0000487;3.00e-10;22!UBERON:0003915;3.90e-09;9!UBERON:0004700;3.90e-09;9!UBERON:0001917;3.90e-09;9!UBERON:0006914;8.20e-09;25!UBERON:0000490;3.14e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.84e-13,18;UBERON:0001986,7.84e-13,18;UBERON:0004852,7.84e-13,18;UBERON:0000055,1.95e-10,68;UBERON:0000487,3.50e-10,22;UBERON:0007500,9.24e-10,59;UBERON:0001981,9.24e-10,59;UBERON:0004537,9.24e-10,59;UBERON:0006965,9.24e-10,59;UBERON:0003915,3.36e-09,9;UBERON:0004700,3.36e-09,9;UBERON:0001917,3.36e-09,9;UBERON:0006914,9.35e-09,25;UBERON:0002049,1.45e-08,78;UBERON:0007798,1.45e-08,78;UBERON:0001637,6.33e-07,42;UBERON:0003509,6.33e-07,42;UBERON:0004572,6.33e-07,42;UBERON:0004872,6.53e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,0,1.46379839637152,0.123121058076788,0,0,1.43117993565528,3.69560947696787,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.472674085820339,0.443458794925128,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,1.19257444420023,0,2.08284300964557,0,0.419499436209906,5.22724279686128,1.67195973229448,0.258416759169329,0,0.33472061276467,0.402829317109147,0,1.22031028774085,0.367663080345869,6.48113558305408,1.07159673940896,1.12264686313085,0.450445921933289,0,0.949265659568129,1.46561395144326,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.860509862246441,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0.298897361103602,1.29177948508141,0.485618833104395,0.280901613404497,0,1.84251475967652,0.413303124703062,0,0.247266929278557,0,0,0.673344455816265,0.750711119231785,0,0,0.919463387397059,0.150238058906597,0.453728732640084,1.61450672119976,0,0.211931901159562,0.900273288253207,0,0.772921620136887,0,0,0.0974370051611986,1.26216887122057,0.0920498986422993,0.323292113637624,1.42003837006646,0.201504196455281,0.339121184620975,0,0,0,1.09776335516636,1.06023814657188,1.16193942869518,1.55491582523056,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.927443239800615,0.117408694235822,0.288732895522148,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.616964956219941,0.300343057843917,0,0.224262168690721,1.30788020649984,0.7333828582095,0,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.2328579353023,0.716243852959582,0,0,0,0,0.254094624222463,0,1.54657762555539,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0,0.35142424497814,0,0,0,0,0,1.39013783148933,0,2.40200396667599,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54209693802656,0.887808626565635,0.410635780069046,0.519254429183621,1.16210378459959,0.120859449591622,0,0,0.114814448164607,0.910455840033585,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,2.27466768141793,1.87103075804167,0.863663664408557,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.386682873168488,0.770243085573222,0.460511024178389,0.964856007391714,0.107420244868274,1.16013355131383,1.02271952899321,4.09547363974992,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0,0,0,1.15755106853338,0,0,1.239293992399,0,0,0,0,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0,2.35217969754956,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0,0,0.0870592065804026,0.52418000472609,0,0.19351266257817,0.0730893170861856,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0.271808412147228,0.313808538937,0,0,0,0.410716136675979,0,0,0,0.837847203816763,1.3749625440701,0,1.19807400299395,0.858452096273142,0,0,0,0,0.315132729228895,0.494495150286999,0.337017719270924,0,0,0,0.544813624446302,0.482259445395058,0.687697182986169,4.15440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,5.71756261098694,0,0,0.542999601753713,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0,0.157204305099666,0.414239055347196,0,0.592834895693833,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.758245587708239,0,0.470531639396343,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.453692771289717,0.621748802331122,0.591420599958536,0.318593534327405,0,0.310525913752519,0,0.53168342911599,1.04349012362347,0,0,0,0.181848659202559,0.107410557042488,0,0.796191777397232,14.4009995278735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34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| ||
|short_description=p3@NES | |short_description=p3@NES | ||
}} | }} |
Latest revision as of 17:06, 17 September 2015
Short description: | p3@NES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NES_5end |
Coexpression cluster: | C797_mesenchymal_skeletal_Endothelial_Pericytes_Skeletal_Astrocyte_left |
Association with transcript: | 238bp_to_AB073350_5end |
EntrezGene: | NES |
HGNC: | 7756 |
UniProt: | P48681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.11e-15 | 5 |
endothelial cell of vascular tree | 1.01e-13 | 24 |
blood vessel endothelial cell | 7.84e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.84e-13 | 18 |
endothelial cell | 4.29e-12 | 36 |
astrocyte of the cerebral cortex | 7.77e-11 | 3 |
endothelial cell of artery | 3.36e-09 | 9 |
meso-epithelial cell | 4.36e-09 | 45 |
embryonic cell | 5.49e-08 | 250 |
oligodendrocyte | 5.86e-08 | 7 |
macroglial cell | 5.86e-08 | 7 |
astrocyte | 5.86e-08 | 7 |
oligodendrocyte precursor cell | 5.86e-08 | 7 |
mesodermal cell | 6.24e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.84e-13 | 18 |
endothelium | 7.84e-13 | 18 |
cardiovascular system endothelium | 7.84e-13 | 18 |
vessel | 1.95e-10 | 68 |
simple squamous epithelium | 3.50e-10 | 22 |
epithelial tube open at both ends | 9.24e-10 | 59 |
blood vessel | 9.24e-10 | 59 |
blood vasculature | 9.24e-10 | 59 |
vascular cord | 9.24e-10 | 59 |
endothelial tube | 3.36e-09 | 9 |
arterial system endothelium | 3.36e-09 | 9 |
endothelium of artery | 3.36e-09 | 9 |
squamous epithelium | 9.35e-09 | 25 |
vasculature | 1.45e-08 | 78 |
vascular system | 1.45e-08 | 78 |
artery | 6.33e-07 | 42 |
arterial blood vessel | 6.33e-07 | 42 |
arterial system | 6.33e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 6.53e-07 | 83 |