FFCP PHASE1:Hg19::chr12:48276620..48276640,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:48276620..48276640,-
|short_description=p7@VDR
|description=CAGE_peak_7_at_VDR_5end
|association_with_transcript=77bp_to_ENST00000550314_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7421 | |EntrezGene=7421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12679 | |HGNC=12679 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVY8 | |UniProt=F8VVY8 | ||
|association_with_transcript=77bp_to_ENST00000550314_5end | |||
|cluster_id=chr12:48276620..48276640,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_VDR_5end | |||
|id=chr12:48276620..48276640,- | |||
|ontology_enrichment_celltype=CL:0000080!1.93e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.50e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.44e-15;1!DOID:0060061;1.44e-15;1!DOID:8691;1.44e-15;1!DOID:3493;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.54e-15,1;DOID:0060061,1.54e-15,1;DOID:8691,1.54e-15,1;DOID:3493,1.73e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.34e-07!15;UBERON:0000179!1.34e-07!15;UBERON:0000463!1.34e-07!15;UBERON:0002294!2.90e-07!7;UBERON:0001173!2.90e-07!7;UBERON:0004912!2.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.05e-26;4!UBERON:0002171;2.56e-15;1!UBERON:0006518;2.56e-15;1!UBERON:0008949;2.56e-15;1!UBERON:0000101;2.56e-15;1!UBERON:0002167;2.56e-15;1!UBERON:0002331;1.00e-13;10!UBERON:0000160;8.25e-13;17!UBERON:0005409;4.36e-10;22!UBERON:0000178;2.42e-09;15!UBERON:0000179;2.42e-09;15!UBERON:0000463;2.42e-09;15!UBERON:0000922;6.09e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.18e-26,4;UBERON:0002171,2.38e-15,1;UBERON:0006518,2.38e-15,1;UBERON:0008949,2.38e-15,1;UBERON:0000101,2.38e-15,1;UBERON:0002167,2.38e-15,1;UBERON:0002331,1.00e-13,10;UBERON:0000358,1.00e-13,10;UBERON:0000307,1.00e-13,10;UBERON:0000091,1.00e-13,10;UBERON:0000087,1.00e-13,10;UBERON:0007010,1.00e-13,10;UBERON:0007806,1.00e-13,10;UBERON:0008780,1.00e-13,10;UBERON:0005728,1.00e-13,10;UBERON:0000160,8.13e-13,17;UBERON:0000178,2.42e-09,15;UBERON:0000179,2.42e-09,15;UBERON:0000463,2.42e-09,15;UBERON:0005409,5.89e-09,25 | |||
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| ||
|short_description=p7@VDR | |||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p7@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VDR_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 77bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.18e-26 | 4 |
lower lobe of right lung | 2.38e-15 | 1 |
right lung lobe | 2.38e-15 | 1 |
lower lobe of lung | 2.38e-15 | 1 |
lobe of lung | 2.38e-15 | 1 |
right lung | 2.38e-15 | 1 |
umbilical cord | 1.00e-13 | 10 |
blastocyst | 1.00e-13 | 10 |
blastula | 1.00e-13 | 10 |
bilaminar disc | 1.00e-13 | 10 |
inner cell mass | 1.00e-13 | 10 |
cleaving embryo | 1.00e-13 | 10 |
connecting stalk | 1.00e-13 | 10 |
inner cell mass derived epiblast | 1.00e-13 | 10 |
extraembryonic mesoderm | 1.00e-13 | 10 |
intestine | 8.13e-13 | 17 |
blood | 2.42e-09 | 15 |
haemolymphatic fluid | 2.42e-09 | 15 |
organism substance | 2.42e-09 | 15 |
gastrointestinal system | 5.89e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.54e-15 | 1 |
cutaneous T cell lymphoma | 1.54e-15 | 1 |
mycosis fungoides | 1.54e-15 | 1 |
signet ring cell adenocarcinoma | 1.73e-08 | 2 |