FFCP PHASE1:Hg19::chr3:58563094..58563126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11170 | |EntrezGene=11170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30827 | |HGNC=30827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464064_5end | |association_with_transcript=0bp_to_ENST00000464064_5end | ||
|cluster_id=chr3:58563094..58563126,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_FAM107A_5end | |description=CAGE_peak_1_at_FAM107A_5end | ||
|id=chr3:58563094..58563126,- | |id=chr3:58563094..58563126,- | ||
|ontology_enrichment_celltype=CL:0000115!4.13e-11!35;CL:0002139!1.05e-10!24;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0002078!1.60e-08!44 | |ontology_enrichment_celltype=CL:0000115!4.13e-11!35;CL:0002139!1.05e-10!24;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0002078!1.60e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.02e-11;36!CL:0002139;4.78e-11;24!CL:0000071;2.30e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.08e-13,36;CL:0002139,4.74e-11,24;CL:0002078,6.24e-10,45;CL:0000071,2.29e-08,18;CL:0002546,2.29e-08,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.48e-12;82!CL:0002546;2.30e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.02e-29;34!UBERON:0003528;4.28e-29;34!UBERON:0002020;4.28e-29;34!UBERON:0002791;4.42e-29;32!UBERON:0001869;4.96e-29;32!UBERON:0002780;8.08e-29;41!UBERON:0001890;8.08e-29;41!UBERON:0000073;1.21e-28;53!UBERON:0002616;1.21e-28;53!UBERON:0000956;7.53e-25;25!UBERON:0000203;7.53e-25;25!UBERON:0002619;9.01e-23;22!UBERON:0001950;1.11e-20;20!UBERON:0007023;3.82e-20;114!UBERON:0000955;3.06e-19;68!UBERON:0001017;3.09e-19;75!UBERON:0001016;2.87e-16;83!UBERON:0004732;1.25e-12;13!UBERON:0004733;1.13e-11;12!UBERON:0002028;1.13e-11;12!UBERON:0002420;1.03e-10;9!UBERON:0007245;1.03e-10;9!UBERON:0010009;1.03e-10;9!UBERON:0010011;1.03e-10;9!UBERON:0000454;1.03e-10;9!UBERON:0000125;1.73e-10;9!UBERON:0002308;1.73e-10;9!UBERON:0011216;4.91e-09;132!UBERON:0002680;9.03e-09;9!UBERON:0001895;9.03e-09;9!UBERON:0009663;1.15e-08;7!UBERON:0004638;2.30e-08;18!UBERON:0001986;2.30e-08;18!UBERON:0004852;2.30e-08;18!UBERON:0000200;1.56e-07;6!UBERON:0001871;1.58e-07;6!UBERON:0001894;2.41e-07;7!UBERON:0002298;3.01e-07;6!UBERON:0010314;3.43e-07;132!UBERON:0000349;9.90e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.20e-74,114;UBERON:0001049,5.42e-54,56;UBERON:0005068,5.42e-54,56;UBERON:0006241,5.42e-54,56;UBERON:0007135,5.42e-54,56;UBERON:0000073,6.13e-51,53;UBERON:0002616,6.13e-51,53;UBERON:0001017,8.09e-48,81;UBERON:0003075,3.57e-44,82;UBERON:0007284,3.57e-44,82;UBERON:0000955,5.09e-42,68;UBERON:0006238,5.09e-42,68;UBERON:0001016,5.56e-42,89;UBERON:0002346,7.82e-41,86;UBERON:0002780,3.79e-40,41;UBERON:0001890,3.79e-40,41;UBERON:0003080,3.79e-40,41;UBERON:0006240,3.79e-40,41;UBERON:0010314,6.41e-35,132;UBERON:0001893,3.91e-34,34;UBERON:0003528,6.12e-34,34;UBERON:0002020,6.12e-34,34;UBERON:0010371,8.81e-34,104;UBERON:0004111,2.27e-33,240;UBERON:0002791,4.84e-32,32;UBERON:0001869,5.20e-32,32;UBERON:0004121,2.72e-30,171;UBERON:0000924,2.72e-30,171;UBERON:0006601,2.72e-30,171;UBERON:0011216,3.52e-29,223;UBERON:0003056,7.75e-29,61;UBERON:0000025,1.52e-27,192;UBERON:0000956,7.95e-25,25;UBERON:0000203,7.95e-25,25;UBERON:0002619,9.81e-23,22;UBERON:0001950,1.21e-20,20;UBERON:0000483,2.93e-16,306;UBERON:0000119,3.79e-16,309;UBERON:0003076,1.76e-14,15;UBERON:0003057,1.76e-14,15;UBERON:0004732,1.24e-12,13;UBERON:0000923,5.23e-12,560;UBERON:0010316,5.23e-12,560;UBERON:0005291,5.23e-12,560;UBERON:0006598,5.23e-12,560;UBERON:0010317,5.23e-12,560;UBERON:0002532,5.23e-12,560;UBERON:0002050,5.40e-12,564;UBERON:0005423,9.43e-12,581;UBERON:0004733,1.13e-11,12;UBERON:0002028,1.13e-11,12;UBERON:0007277,1.13e-11,12;UBERON:0000922,2.19e-11,592;UBERON:0002420,1.03e-10,9;UBERON:0007245,1.03e-10,9;UBERON:0010009,1.03e-10,9;UBERON:0010011,1.03e-10,9;UBERON:0000454,1.03e-10,9;UBERON:0000125,1.72e-10,9;UBERON:0002308,1.72e-10,9;UBERON:0002680,9.00e-09,9;UBERON:0001895,9.00e-09,9;UBERON:0010092,9.00e-09,9;UBERON:0009663,1.14e-08,7;UBERON:0004638,2.29e-08,18;UBERON:0001986,2.29e-08,18;UBERON:0004852,2.29e-08,18;UBERON:0000200,1.57e-07,6;UBERON:0001871,1.69e-07,6;UBERON:0001894,2.42e-07,7;UBERON:0006222,2.42e-07,7;UBERON:0002298,3.01e-07,6;UBERON:0000349,9.91e-07,5 | |||
|phase1_expression=2.18014055124668,1.92690471501885,0.845726424575827,12.0087958023756,2.23480547213644,4.36169262050184,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,22.6492425916885,26.8431874339612,0.672325146451775,0,0,0,25.8554221961255,46.5121576036897,10.657460530255,63.2581531559635,26.9642617393582,38.2905050764149,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.797854630486527,0.852449501065388,0,0,0,0.251248665256743,0.521482918420201,0,7.26479403160043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.66221330396589,0,0,0.144846518960824,0,0,0.472674085820339,0.221729397462564,0.087834785693126,116.505887655215,0.364295288292542,0,0,0,0,0,0,0,12.7207940714691,13.763753521698,26.7298186237848,15.2633144319483,26.847963917434,36.590699578029,39.2910537089204,23.7743418435783,38.066990107478,14.7277069616455,0.805658634218294,2.28081631715554,0.488124115096339,21.3244586600604,16.2028389576352,29.0224116923259,20.4321729089815,21.0583468503813,6.13266549863533,16.1375162126582,9.52649068438118,0,0,0,0.496971951695318,2.02608818663328,0,0.286836620748814,0,0,0,0,0.933633106199299,2.02066008104532,5.06731899651722,4.99479511228274,5.18558332031999,10.5444644325208,0,2.85235910772225,0.149448680551801,0,0,0,45.934688532351,8.10706494257669,94.3364382134739,0,0.247266929278557,1.82032272387605,0,2.02003336744879,3.503318556415,11.3596287348515,0,1.5324389789951,0.150238058906597,0.794025282120147,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0,0,0,0.969876340912871,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,3.21620469096443,4.14404764057442,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,70.8629236439662,15.426595118379,0,1.47008711385542,0,0,7.08947888017685,0,0,0.343135620597051,0,0,0,0,1.62904152655162,4.15973914111831,0,0.34779121492523,0,4.76409277611544,4.1668696131895,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.829312462163088,0.432359860250884,0.6312121671319,0,0,0,1.71072446022705,0,0,0,1.12131084345361,0,0.2933531432838,0,78.6844180874141,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0.128343036279748,146.612598176361,135.345448011927,26.2918196344416,25.1274398001523,15.3105300396759,0,0,0,46.7454583449923,6.5022167737758,0.813795071099207,0,0.713715955188647,0.630809660135739,0.35142424497814,0.300946099727719,0,18.6251528326509,0.664225598535437,0.368738337083406,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0.519254429183621,0.232420756919918,0,0,0,0,0.546273504020151,1.31124414959424,0,0,0,0,0,83.0253703717545,78.0730107219207,11.8753753856177,52.4372659146984,0,0,1.01950509218015,0.831076008928724,0,0,0,0.512900250232778,0,0.650756789328606,20.1960382829536,0,0,0,0,0,0,0,0,0.137836572484531,0.859361958946189,0.870100163485371,0.0852266274161009,0,0,0,0,0,0,0,0,3.38836938193698,1.06461206063404,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,18.4013764854586,0.318203247925937,0,0.539617372749944,0,0,0.404364963146632,0,0,0.975267478179181,0.974853958525138,0,0,0,2.26016233240486,0,0,2.19225442626881,0,5.24715801637306,0,0.92947049429925,0,0,0,0,0,1.26664581178598,0,6.45104395401716,12.2477152085744,0.192444225451024,0.670302275535787,0,23.8183815965251,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.3307614006568,0,0,0,0,0,0,438.419112664937,920.681330406806,0,0,83.6056616186854,17.9323189425963,24.0367006512098,0,0,0,0,0,0,0,29.790308502354,0,3.33410970433911,469.157049110086,741.959249098486,131.745106680788,0,0,32.6249808945657,0,0,0,0,0,0.173624994933292,549.15965920458,585.857498842232,262.440586465383,417.657864760235,249.442190396794,641.70228667537,0,0,45.0928514832251,0,0,0,0,0.638002319463839,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,33.5254169467655,7.94339188413713,0,0,0,888.414333818304,5.61804353109152,374.823113160543,0,0,0,26.4371549909092,1.20990716048664,54.1748788085968,179.323512985649,0,0,0,0,0,0,0.284609546029793,0,66.9940589973605,0,0,19.9188401795914,0,0,0,0,24.053276089128,0,34.3490725986409,0,0,425.638481211372,0,0,21.1318464791959,0,0,0,0,0,0,0,0,0,0,0,285.80005742586,1084.83822234015,0,0,0,58.6493042671734,31.853298937624,237.615971134925,49.1210341227518,104.301929697187,128.993102401402,38.9664140423012,0,0,0,0,0.0674035438541849,0,0,463.618909158824,1155.00488382616,0.160753148465019,0,0,0,0,523.721927948831,0,45.3920874043381,13.4808291506945,0,0,0,15.7232971802141,88.7203240289678,0.25426853765475,0,0,0,0,0,0,0.226624183040251,3.07759690723973,1.32506888912221,308.856982747744,253.886595345965,0,0,102.515916064987,39.1438719698168,80.3623767373559,14.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| ||
|short_description=p1@FAM107A | |short_description=p1@FAM107A | ||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p1@FAM107A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM107A_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000464064_5end |
EntrezGene: | FAM107A |
HGNC: | 30827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.08e-13 | 36 |
endothelial cell of vascular tree | 4.74e-11 | 24 |
meso-epithelial cell | 6.24e-10 | 45 |
blood vessel endothelial cell | 2.29e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.29e-08 | 18 |