FFCP PHASE1:Hg19::chr3:46505137..46505149,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4057 | |EntrezGene=4057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6720 | |HGNC=6720 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000478874_5end | |association_with_transcript=-3bp_to_ENST00000478874_5end | ||
|cluster_id=chr3:46505137..46505149,- | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_4_at_LTF_5end | |description=CAGE_peak_4_at_LTF_5end | ||
|id=chr3:46505137..46505149,- | |id=chr3:46505137..46505149,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.92e-29;4!UBERON:0007284;3.92e-29;4!UBERON:0004872;2.46e-17;7 | |||
|ontology_enrichment_disease=DOID:114!4.70e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-49!115;UBERON:0006947!5.12e-10!3;UBERON:0004054!5.12e-10!3;UBERON:0000988!8.09e-09!3;UBERON:0002298!3.65e-08!8;UBERON:0005904!1.36e-07!4;UBERON:0002133!1.40e-07!2;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0002081!1.68e-07!2;UBERON:0000341!3.09e-07!2;UBERON:0004732!6.26e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;5.51e-57;2!UBERON:0002106;6.91e-39;3!UBERON:0003978;1.98e-38;3!UBERON:0000946;1.98e-38;3!UBERON:0002134;1.33e-29;1!UBERON:0005208;1.33e-29;1!UBERON:0004145;1.33e-29;1!UBERON:0005946;1.33e-29;1!UBERON:0005965;1.33e-29;1!UBERON:0002078;1.33e-29;1!UBERON:0002135;2.73e-29;1!UBERON:0002171;2.73e-29;1!UBERON:0006518;2.73e-29;1!UBERON:0008949;2.73e-29;1!UBERON:0000101;2.73e-29;1!UBERON:0002167;2.73e-29;1!UBERON:0004177;8.09e-24;5!UBERON:0005057;8.09e-24;5!UBERON:0002081;1.54e-15;2!UBERON:0010313;2.58e-12;10!UBERON:0007100;6.92e-11;25!UBERON:0004151;8.17e-11;3!UBERON:0002075;2.44e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.77e-57,2;UBERON:0002106,6.91e-39,3;UBERON:0004854,6.91e-39,3;UBERON:0009034,6.91e-39,3;UBERON:0002095,6.91e-39,3;UBERON:0004782,6.91e-39,3;UBERON:0003281,6.91e-39,3;UBERON:0009664,6.91e-39,3;UBERON:0002296,6.91e-39,3;UBERON:0005602,6.91e-39,3;UBERON:0001179,6.91e-39,3;UBERON:0006293,6.91e-39,3;UBERON:0003978,1.80e-38,3;UBERON:0009751,1.80e-38,3;UBERON:0000946,1.80e-38,3;UBERON:0002523,1.80e-38,3;UBERON:0005983,1.80e-38,3;UBERON:0002165,1.80e-38,3;UBERON:0002062,1.80e-38,3;UBERON:0007280,1.80e-38,3;UBERON:0002134,1.33e-29,1;UBERON:0005208,1.33e-29,1;UBERON:0005946,1.33e-29,1;UBERON:0005965,1.33e-29,1;UBERON:0002078,1.33e-29,1;UBERON:0002135,2.37e-29,1;UBERON:0002171,3.16e-29,1;UBERON:0006518,3.16e-29,1;UBERON:0008949,3.16e-29,1;UBERON:0000101,3.16e-29,1;UBERON:0002167,3.16e-29,1;UBERON:0004177,2.46e-17,7;UBERON:0005057,2.46e-17,7;UBERON:0004797,3.71e-17,7;UBERON:0002081,1.54e-15,2;UBERON:0010227,1.54e-15,2;UBERON:0000945,2.65e-15,8;UBERON:0010039,2.65e-15,8;UBERON:0010313,2.51e-12,10;UBERON:0002342,2.51e-12,10;UBERON:0005062,2.51e-12,10;UBERON:0004151,8.17e-11,3;UBERON:0004145,8.17e-11,3;UBERON:0004457,1.53e-10,12;UBERON:0000042,1.53e-10,12;UBERON:0003887,1.53e-10,12;UBERON:0007100,4.06e-10,27;UBERON:0004923,2.22e-07,66;UBERON:0002075,2.44e-07,18 | |||
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| ||
|short_description=p4@LTF | |short_description=p4@LTF | ||
}} | }} |
Latest revision as of 11:21, 18 September 2015
Short description: | p4@LTF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTF_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | -3bp_to_ENST00000478874_5end |
EntrezGene: | LTF |
HGNC: | 6720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data